##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545464_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1258260 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.022681321825377 31.0 31.0 33.0 30.0 34.0 2 31.315924371751468 31.0 31.0 34.0 30.0 34.0 3 31.404043679366744 31.0 31.0 34.0 30.0 34.0 4 35.246463370050705 37.0 35.0 37.0 33.0 37.0 5 35.13229936579086 37.0 35.0 37.0 32.0 37.0 6 35.191629710870565 37.0 35.0 37.0 32.0 37.0 7 35.630092349752836 37.0 35.0 37.0 35.0 37.0 8 35.55854195476293 37.0 35.0 37.0 35.0 37.0 9 37.2644493189007 39.0 37.0 39.0 34.0 39.0 10 36.68475513804778 39.0 37.0 39.0 32.0 39.0 11 36.43246944192774 38.0 35.0 39.0 32.0 39.0 12 35.73430451575986 37.0 35.0 39.0 31.0 39.0 13 35.32960993753278 37.0 35.0 39.0 30.0 39.0 14 36.35045459602944 38.0 35.0 40.0 30.0 41.0 15 36.66644493189007 38.0 35.0 40.0 31.0 41.0 16 36.746891739386136 38.0 35.0 40.0 31.0 41.0 17 36.65177626245768 38.0 35.0 40.0 31.0 41.0 18 36.60700888528603 38.0 35.0 40.0 31.0 41.0 19 36.5253095544641 38.0 35.0 40.0 31.0 41.0 20 36.37669321126 38.0 35.0 40.0 31.0 41.0 21 36.225259485321 38.0 35.0 40.0 31.0 41.0 22 36.11693211259994 37.0 34.0 40.0 30.0 41.0 23 36.038654967971645 37.0 34.0 40.0 30.0 41.0 24 35.918581215329105 37.0 34.0 40.0 30.0 41.0 25 35.788015195587555 37.0 34.0 40.0 30.0 41.0 26 35.64187608284456 37.0 34.0 40.0 30.0 41.0 27 35.57602482793699 37.0 34.0 40.0 29.0 41.0 28 35.61469012763658 37.0 34.0 40.0 29.0 41.0 29 35.65064851461542 37.0 34.0 40.0 30.0 41.0 30 35.54336305691987 37.0 34.0 40.0 29.0 41.0 31 35.40431945702796 37.0 34.0 40.0 29.0 41.0 32 35.19305866831974 37.0 34.0 40.0 28.0 41.0 33 34.951253318074166 37.0 34.0 40.0 27.0 41.0 34 34.77799024049084 36.0 34.0 40.0 26.0 41.0 35 34.57359766661898 36.0 33.0 40.0 25.0 41.0 36 34.39067124441689 36.0 33.0 40.0 24.0 41.0 37 34.334545324495735 36.0 33.0 40.0 23.0 41.0 38 34.3277088995915 36.0 33.0 40.0 24.0 41.0 39 34.27114427860697 36.0 33.0 40.0 23.0 41.0 40 34.1124195317343 36.0 33.0 40.0 23.0 41.0 41 34.04578306550316 36.0 33.0 40.0 23.0 41.0 42 33.98968178277939 36.0 33.0 40.0 23.0 41.0 43 33.89870853400728 35.0 33.0 40.0 23.0 41.0 44 33.82233004307536 35.0 33.0 40.0 23.0 41.0 45 33.7395593915407 35.0 33.0 40.0 23.0 41.0 46 33.67040754692989 35.0 33.0 40.0 23.0 41.0 47 33.61721265875097 35.0 33.0 40.0 23.0 41.0 48 33.583694943811295 35.0 33.0 39.0 23.0 41.0 49 33.58566989334478 35.0 33.0 39.0 23.0 41.0 50 33.51099295853003 35.0 32.0 39.0 23.0 41.0 51 33.33633748191948 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 8.0 14 15.0 15 53.0 16 139.0 17 368.0 18 768.0 19 1541.0 20 2766.0 21 4208.0 22 6270.0 23 8913.0 24 12846.0 25 17788.0 26 23905.0 27 27693.0 28 30035.0 29 33247.0 30 38756.0 31 47536.0 32 58517.0 33 75258.0 34 120264.0 35 160376.0 36 95859.0 37 115117.0 38 157926.0 39 218001.0 40 82.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.42925945353107 22.77867849252142 27.351262855053804 16.44079919889371 2 32.54692988730469 25.002066345588354 29.05130895045539 13.399694816651566 3 30.101489358320222 24.704353631205 31.867181663567145 13.326975346907636 4 26.23138302099725 27.238567545658288 31.70092031853512 14.829129114809339 5 22.418816460826857 31.835073832117367 31.383100472080493 14.363009234975282 6 21.02029787166404 39.83373865496797 29.34115365663694 9.80480981673104 7 84.90669654920286 4.491996884586651 8.8166992513471 1.7846073148633828 8 85.86174558517318 3.971039371830941 8.44873078695977 1.7184842560361135 9 80.64438192424458 5.7407848934242525 10.457854497480648 3.156978684850508 10 45.54146201897859 25.728466294724463 17.1428003751212 11.587271311175751 11 39.60445376949121 22.13000492743948 23.727290067235707 14.53825123583361 12 36.7251601417831 21.70552985869375 27.600098548789596 13.969211450733551 13 21.397882790520242 36.613974854163686 26.10303117002845 15.88511118528762 14 16.043901896269453 39.09144373976762 28.715686742008806 16.148967621954128 15 15.414779139446539 23.73571439924976 45.582629981084985 15.266876480218713 16 17.389887622589924 18.821308791505732 43.87892804348863 19.909875542415715 17 16.510578099915758 20.069461001700763 31.17606853909367 32.24389235928981 18 20.852844404177198 22.907586667302464 35.77011110581279 20.469457822707547 19 28.037448540047365 23.696533307901387 27.497178643523597 20.768839508527652 20 30.4344888973662 21.648705355014066 28.09419356889673 19.822612178723 21 22.728609349419038 27.016832769062038 29.110120324893106 21.144437556625817 22 23.45453244957322 24.436205553701143 26.706483556657606 25.40277844006803 23 20.28006930205204 28.39977429148189 27.376694800756603 23.94346160570947 24 19.197224738925183 23.46279783192663 39.56455740466994 17.775420024478247 25 18.422663042614403 25.30756759334319 36.052962026926075 20.216807337116336 26 17.944065614419912 31.89936896984725 28.973185192249613 21.183380223483223 27 18.187814919015146 32.72558930586683 29.20437747365409 19.88221830146393 28 16.265239298714096 28.422663042614403 36.608173191550236 18.703924467121265 29 16.81528459936738 24.154228855721392 36.71912005467868 22.311366490232544 30 18.173906823708933 30.09521084672484 32.57124918538299 19.15963314418324 31 26.43356698933448 28.035461669289337 26.851684071654507 18.679287269721677 32 27.813408993371798 25.692941045570866 28.646464164799006 17.847185796258323 33 26.459714208510164 27.978557690779333 26.22566083321412 19.336067267496386 34 19.771033013844516 27.56552699759986 29.130306931794703 23.533133056760924 35 21.14411965730453 25.691748923116048 31.411949835487103 21.752181584092316 36 27.67361276683674 27.52205426541414 26.25506652043298 18.549266447316135 37 20.071845246610398 33.11048590911258 28.78268402396961 18.034984820307407 38 20.17786467025893 31.77880565224993 27.19485638898161 20.848473288509528 39 20.430833055171426 32.25231669130386 27.980385611876716 19.33646464164799 40 23.35550681099296 26.813695102760953 27.916726272789404 21.91407181345668 41 17.51013304086596 26.500723220955923 29.295376154371912 26.69376758380621 42 20.87994532131674 26.831815364074195 26.27112043615787 26.017118878451196 43 21.36386756314275 27.489072210830827 27.708661167008408 23.438399059018007 44 19.974488579466882 29.58196239251029 28.831163670465564 21.61238535755726 45 17.89367857199625 36.24298634622415 24.759668113108578 21.10366696867102 46 20.34468233910321 33.296218587573314 26.815681973518984 19.54341709980449 47 20.886621207063722 29.36555242954556 27.7299604215345 22.01786594185621 48 21.765294931095323 25.65821054472049 31.189499785417958 21.386994738766234 49 20.380604962408405 26.733107624815222 32.76413459857263 20.12215281420374 50 19.388838554829686 33.16246244814267 27.887320585570553 19.561378411457092 51 18.727051642744744 32.08653219525377 26.893249407912514 22.29316675408898 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 937.0 1 1641.0 2 2345.0 3 8889.5 4 15434.0 5 11324.5 6 7215.0 7 7490.0 8 7765.0 9 8019.5 10 8274.0 11 8193.5 12 8113.0 13 8022.5 14 7932.0 15 7649.5 16 7367.0 17 6696.5 18 6026.0 19 6142.0 20 6258.0 21 6128.0 22 5998.0 23 6601.0 24 7204.0 25 7433.5 26 8889.5 27 10116.0 28 14800.0 29 19484.0 30 21690.0 31 23896.0 32 28105.0 33 32314.0 34 37450.0 35 42586.0 36 43922.0 37 45258.0 38 50175.0 39 55092.0 40 66391.5 41 77691.0 42 92847.0 43 108003.0 44 108807.0 45 109611.0 46 107735.0 47 105859.0 48 97906.0 49 89953.0 50 85394.0 51 80835.0 52 77757.5 53 74680.0 54 68360.0 55 62040.0 56 59283.5 57 56527.0 58 52647.0 59 48767.0 60 45119.5 61 41472.0 62 36037.0 63 30602.0 64 25037.5 65 19473.0 66 14851.0 67 10229.0 68 8273.5 69 6318.0 70 5048.5 71 3779.0 72 3094.5 73 2410.0 74 1931.0 75 1004.0 76 556.0 77 447.0 78 338.0 79 282.5 80 227.0 81 158.5 82 90.0 83 53.0 84 16.0 85 27.5 86 39.0 87 23.5 88 8.0 89 6.5 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1258260.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.18712469114372 #Duplication Level Percentage of deduplicated Percentage of total 1 79.91564817328224 14.53435858101056 2 5.314538105668292 1.9331233440724793 3 1.920588616310335 1.0478995393568171 4 1.1340932868134332 0.8250358407465972 5 0.7679782125107533 0.6983657755507369 6 0.635940225455983 0.6939554505889207 7 0.5129218468824737 0.6530001510244292 8 0.43696592576133403 0.6357723022081945 9 0.4013197387843853 0.6568966917259957 >10 5.670304931522304 25.092255238603883 >50 2.4410712459203587 31.90702113024529 >100 0.8451211445616634 19.875894321228834 >500 0.0013157049474234511 0.15641517721201245 >1k 0.0017542732632312681 0.5849815959576233 >5k 4.3856831580781704E-4 0.7050248604676074 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8839 0.7024780252094162 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3365 0.26743280403096337 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1780 0.14146519797180235 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.947483032123727E-5 0.0 0.0 0.008742231335336099 0.0 2 7.947483032123727E-5 0.0 0.0 0.03337942873491965 0.0 3 7.947483032123727E-5 0.0 0.0 0.04617487641663885 0.0 4 7.947483032123727E-5 0.0 0.0 0.06381828874795352 0.0 5 7.947483032123727E-5 0.0 0.0 0.09807194061640678 0.0 6 7.947483032123727E-5 0.0 0.0 0.14615421296075534 0.0 7 7.947483032123727E-5 0.0 0.0 0.17540095051897064 0.0 8 7.947483032123727E-5 0.0 0.0 0.25185573728800087 0.0 9 7.947483032123727E-5 0.0 0.0 0.28094352518557375 0.0 10 7.947483032123727E-5 0.0 0.0 0.3311716179485957 0.0 11 7.947483032123727E-5 0.0 0.0 0.38139971071161766 0.0 12 7.947483032123727E-5 0.0 0.0 0.42407769459412203 0.0 13 7.947483032123727E-5 0.0 0.0 0.43925738718547835 0.0 14 7.947483032123727E-5 0.0 0.0 0.44601274776278355 0.0 15 7.947483032123727E-5 0.0 0.0 0.456900799516793 0.0 16 7.947483032123727E-5 0.0 0.0 0.4824916948802314 0.0 17 7.947483032123727E-5 0.0 0.0 0.5126126555719803 0.0 18 7.947483032123727E-5 0.0 0.0 0.5540190421693449 0.0 19 7.947483032123727E-5 0.0 0.0 0.5715829796703384 0.0 20 7.947483032123727E-5 0.0 0.0 0.5943127811422123 0.0 21 7.947483032123727E-5 0.0 0.0 0.621016324130148 0.0 22 7.947483032123727E-5 0.0 0.0 0.6508988603309332 0.0 23 7.947483032123727E-5 0.0 0.0 0.6867420088058112 0.0 24 7.947483032123727E-5 0.0 0.0 0.7151145232304928 0.0 25 7.947483032123727E-5 0.0 0.0 0.7387980226662216 0.0 26 7.947483032123727E-5 0.0 0.0 0.7625609969322715 0.0 27 7.947483032123727E-5 0.0 0.0 0.7858471222163941 0.0 28 7.947483032123727E-5 0.0 0.0 0.8136633128288271 0.0 29 7.947483032123727E-5 0.0 0.0 0.8451353456360371 0.0 30 7.947483032123727E-5 0.0 0.0 0.8824090410566974 0.0 31 7.947483032123727E-5 0.0 0.0 0.9161858439432232 0.0 32 7.947483032123727E-5 0.0 0.0 0.948293675393003 0.0 33 7.947483032123727E-5 0.0 0.0 0.9850110470014146 0.0 34 7.947483032123727E-5 0.0 0.0 1.0228410662343237 0.0 35 7.947483032123727E-5 0.0 0.0 1.0694927916328898 0.0 36 7.947483032123727E-5 0.0 0.0 1.1091507319631873 0.0 37 7.947483032123727E-5 0.0 0.0 1.1527029389792254 0.0 38 7.947483032123727E-5 0.0 0.0 1.1960961963346208 0.0 39 7.947483032123727E-5 0.0 0.0 1.237661532592628 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAC 55 1.8189894E-12 45.000004 6 TATATCG 20 7.033542E-4 45.0 42 CGCGATC 20 7.033542E-4 45.0 19 CGTTAGA 20 7.033542E-4 45.0 27 CTCGACT 20 7.033542E-4 45.0 14 CGCACGT 20 7.033542E-4 45.0 29 TATCGGC 20 7.033542E-4 45.0 11 TCGAATC 20 7.033542E-4 45.0 20 GACGCAT 30 2.165667E-6 44.999996 10 CCCGAGT 60 0.0 44.999996 45 CGTTTTT 6575 0.0 41.71483 1 ACGTTAG 65 0.0 41.538464 1 CGTTAGG 255 0.0 41.47059 2 TACGGGA 370 0.0 41.351353 4 AGTACGG 105 0.0 40.714287 2 AAATGCG 50 1.0822987E-9 40.5 1 CGGGTAT 145 0.0 40.344826 6 CGTATGA 95 0.0 40.263157 15 GCGATAT 95 0.0 40.263157 9 GGTTAAC 320 0.0 40.078125 8 >>END_MODULE