SRR1545463_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545463_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1474696
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12290	0.8333921025079066	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1848	0.12531396301339395	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGAT	20	7.033937E-4	45.0	44
TAGCCGA	20	7.033937E-4	45.0	39
GGGCGTA	20	7.033937E-4	45.0	8
TAATGCG	35	1.2122473E-7	45.0	1
CGTTTTT	9775	0.0	42.05371	1
CGATCTC	55	6.184564E-11	40.909092	10
TACGGGA	370	0.0	40.743244	4
CGACGGT	75	0.0	39.0	28
TAACGGG	435	0.0	38.275864	3
ACGGGAT	505	0.0	37.87129	5
CGTTAGG	245	0.0	37.65306	2
AGGGCGA	1555	0.0	37.62058	6
CGAACGC	30	1.1400785E-4	37.500004	41
CCACTCG	30	1.1400785E-4	37.500004	29
CGTAAGG	180	0.0	37.5	2
GGGCGAT	3390	0.0	37.300884	7
GGCACCG	725	0.0	37.241383	8
CGGTCTA	85	0.0	37.058823	31
GCGATGT	445	0.0	36.91011	9
GACCGAT	865	0.0	36.6763	9