##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545463_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1474696 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.874948463954606 31.0 31.0 33.0 28.0 34.0 2 31.157844735457342 31.0 31.0 34.0 28.0 34.0 3 31.225209805953227 31.0 31.0 34.0 28.0 34.0 4 35.08137134704373 35.0 35.0 37.0 32.0 37.0 5 34.95683856198159 35.0 35.0 37.0 32.0 37.0 6 35.006391825840716 37.0 35.0 37.0 32.0 37.0 7 35.5661180338185 37.0 35.0 37.0 35.0 37.0 8 35.49334506908542 37.0 35.0 37.0 35.0 37.0 9 37.17782987137688 39.0 37.0 39.0 34.0 39.0 10 36.48155619870129 38.0 35.0 39.0 32.0 39.0 11 36.20597533322122 38.0 35.0 39.0 31.0 39.0 12 35.805655538497426 37.0 35.0 39.0 30.0 39.0 13 35.52482274312808 37.0 35.0 39.0 30.0 39.0 14 36.56296416346149 38.0 35.0 40.0 30.0 41.0 15 36.784570514872215 38.0 35.0 40.0 31.0 41.0 16 36.776025702924535 38.0 35.0 40.0 31.0 41.0 17 36.66114304236263 38.0 35.0 40.0 31.0 41.0 18 36.57114890119726 38.0 35.0 40.0 31.0 41.0 19 36.49224992812078 38.0 35.0 40.0 30.0 41.0 20 36.35894109701254 38.0 35.0 40.0 30.0 41.0 21 36.21390713747105 38.0 34.0 40.0 30.0 41.0 22 36.11323147279168 38.0 34.0 40.0 30.0 41.0 23 36.007252342177644 38.0 34.0 40.0 30.0 41.0 24 35.90824346170329 38.0 34.0 40.0 30.0 41.0 25 35.77942572570889 37.0 34.0 40.0 29.0 41.0 26 35.63598328062191 37.0 34.0 40.0 29.0 41.0 27 35.541449898826606 37.0 34.0 40.0 29.0 41.0 28 35.53854218089695 37.0 34.0 40.0 29.0 41.0 29 35.540554120984936 37.0 34.0 40.0 29.0 41.0 30 35.39596296457032 37.0 34.0 40.0 28.0 41.0 31 35.2498284392173 37.0 34.0 40.0 27.0 41.0 32 35.030320825444704 37.0 34.0 40.0 26.0 41.0 33 34.76055268340051 37.0 33.0 40.0 25.0 41.0 34 34.547359591400536 37.0 33.0 40.0 24.0 41.0 35 34.316659840401 37.0 33.0 40.0 23.0 41.0 36 34.15259416177978 37.0 33.0 40.0 23.0 41.0 37 34.12338882047554 37.0 33.0 40.0 23.0 41.0 38 34.05643875076626 37.0 33.0 40.0 23.0 41.0 39 33.96461575809523 37.0 33.0 40.0 22.0 41.0 40 33.830590169092474 37.0 33.0 40.0 21.0 41.0 41 33.74655590033471 36.0 33.0 40.0 21.0 41.0 42 33.696896851961355 36.0 33.0 40.0 21.0 41.0 43 33.59685114762636 36.0 32.0 40.0 21.0 41.0 44 33.51097717766916 36.0 32.0 40.0 20.0 41.0 45 33.41967157976966 36.0 32.0 40.0 20.0 41.0 46 33.36598865122032 36.0 32.0 40.0 20.0 41.0 47 33.28197811616767 35.0 32.0 40.0 20.0 41.0 48 33.19917528765251 35.0 32.0 40.0 20.0 41.0 49 33.2144001204316 36.0 32.0 40.0 20.0 41.0 50 33.13606600953688 35.0 32.0 39.0 20.0 41.0 51 32.95496359927741 35.0 31.0 39.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 4.0 12 4.0 13 10.0 14 16.0 15 66.0 16 222.0 17 591.0 18 1271.0 19 2529.0 20 4149.0 21 6374.0 22 9070.0 23 12543.0 24 17849.0 25 24625.0 26 31397.0 27 35951.0 28 38029.0 29 42141.0 30 48577.0 31 57412.0 32 68842.0 33 85197.0 34 120815.0 35 151858.0 36 121353.0 37 147539.0 38 196018.0 39 250185.0 40 56.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.52501396898073 22.49161861156469 26.011327080293157 16.972040339161428 2 34.951406934039284 24.47609541220699 27.64691841572772 12.925579238026005 3 28.884665042829166 24.990099654437252 32.88284500669968 13.242390296033896 4 25.826814475661426 27.51536587879807 31.75590087719774 14.901918768342764 5 22.662636909573227 30.827641764811187 31.74037225299316 14.769349072622425 6 21.068342221040812 39.826242154315196 29.113661391907215 9.991754232736781 7 84.0336584624899 4.130071553730396 10.075907170020127 1.7603628137595817 8 84.53152378524116 3.58392509371423 10.02593076810407 1.8586203529405383 9 79.59708305983064 5.582777738598328 11.458429398330232 3.361709803240803 10 38.83803848386379 30.809671959508943 18.274207023006774 12.078082533620488 11 32.45434991347369 25.57652560256487 27.344754444305806 14.624370039655632 12 29.005028833061186 24.639722356336495 30.939054557685107 15.416194252917212 13 22.019114447994706 30.863784807173815 30.95492223481992 16.162178510011554 14 18.85615747245534 33.201283518772684 31.93030970450859 16.01224930426339 15 18.414642746708473 24.86241232091224 40.186180745048475 16.536764187330814 16 20.778655397451406 22.85596489039097 38.531941498451204 17.83343821370642 17 20.9299408149205 22.417230398671997 31.904134818294754 24.74869396811275 18 23.215360996435873 23.52328886767171 34.60021590890597 18.66113422698644 19 27.238291824213263 24.33179448510066 29.606779973635245 18.823133717050837 20 28.557750207500394 24.136025323185255 29.675065233783776 17.63115923553058 21 24.552992616783392 26.36245029484043 31.225486473144297 17.859070615231882 22 23.968533175651118 24.52173193661609 29.85801819493645 21.651716692796345 23 20.855688223199902 27.94413221436825 30.49957414951963 20.70060541291222 24 19.799877398460428 24.932392845711927 37.126431481471435 18.141298274356206 25 19.90423789038554 26.846007583935943 34.59309579737112 18.65665872830739 26 20.048606628077923 29.633632965709545 30.40870796421771 19.909052441994824 27 20.019922750180378 29.52506821744956 31.262307621367384 19.192701411002673 28 18.3275061436391 27.973155145196028 35.312430494149304 18.386908217015574 29 19.15418499812843 26.26493867210598 34.76655527647733 19.81432105328827 30 20.213793215686486 28.23890483191112 33.00490406158286 18.542397890819533 31 24.96670500225131 26.637964705946178 30.08206437123312 18.313265920569393 32 25.757783299066382 25.850073506675276 30.180593152758263 18.21155004150008 33 24.479485941509303 27.08605705853952 28.61267678219782 19.821780217753354 34 20.691247552037844 27.376693230333576 30.5385652364962 21.393493981132384 35 20.886881092781156 27.255786955413186 31.469333340566465 20.387998611239198 36 25.140503534287745 28.324820844431663 28.025843970553932 18.50883165072666 37 20.92960176199027 30.987810369052333 28.678859914178922 19.40372795477848 38 21.331786347830334 30.658250920867758 28.11955820046979 19.890404530832118 39 21.38230523443476 30.50167627768706 27.763349191969056 20.352669295909124 40 23.784291813363566 27.2214747988738 28.525743610886583 20.468489776876048 41 19.53439895408952 26.892864698893877 29.13285178775829 24.439884559258314 42 21.74610902857267 27.22432284348774 28.026115212898116 23.00345291504147 43 21.552170752480514 27.032554506149065 28.69771125709977 22.717563484270656 44 20.560847795070984 29.031135908688977 29.616273455681714 20.791742840558324 45 19.84056375008815 32.41081551723203 27.17556703212052 20.573053700559303 46 21.065901039943146 30.80940071716476 28.022928115353945 20.101770127538153 47 20.940926129859985 28.976616197507827 29.054869613805153 21.02758805882704 48 21.561257371010704 27.659531184732312 30.811977519434514 19.967233924822473 49 21.62913576764296 27.633085056174288 30.875651659731908 19.862127516450848 50 20.34507451027195 31.042330080233487 28.802953286643486 19.80964212285108 51 20.195280925695872 30.725654643397686 27.871439266126714 21.207625164779724 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 855.0 1 1547.0 2 2239.0 3 12117.5 4 21996.0 5 16055.5 6 10115.0 7 10248.5 8 10382.0 9 10684.5 10 10987.0 11 10956.0 12 10925.0 13 10729.0 14 10533.0 15 10262.5 16 9992.0 17 9521.0 18 9050.0 19 8925.5 20 8801.0 21 9069.0 22 9337.0 23 9696.5 24 10056.0 25 11316.5 26 14874.0 27 17171.0 28 20536.0 29 23901.0 30 26834.5 31 29768.0 32 34861.0 33 39954.0 34 45338.0 35 50722.0 36 55533.5 37 60345.0 38 65235.0 39 70125.0 40 79814.0 41 89503.0 42 99328.0 43 109153.0 44 110018.0 45 110883.0 46 109110.5 47 107338.0 48 107178.5 49 107019.0 50 102086.0 51 97153.0 52 94955.5 53 92758.0 54 83769.5 55 74781.0 56 71458.5 57 68136.0 58 60528.0 59 52920.0 60 48132.5 61 43345.0 62 38127.0 63 32909.0 64 27518.5 65 22128.0 66 18012.0 67 13896.0 68 11139.5 69 8383.0 70 7024.5 71 5666.0 72 4723.5 73 3781.0 74 3151.0 75 1834.5 76 1148.0 77 925.5 78 703.0 79 577.0 80 451.0 81 317.5 82 184.0 83 129.0 84 74.0 85 46.0 86 18.0 87 13.0 88 8.0 89 6.5 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1474696.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.587569566486682 #Duplication Level Percentage of deduplicated Percentage of total 1 76.66709612579349 18.083904633276752 2 5.686070607148765 2.682411720121533 3 2.5835651674780027 1.8282006935231763 4 1.6368994473235734 1.5444191834835357 5 1.1766293552578617 1.3876913385557592 6 0.8936104997412507 1.2646859896793807 7 0.782032898747167 1.2912378781736027 8 0.6556321148664844 1.2371814495548792 9 0.5736082528871729 1.2177022111998366 >10 7.879259029726668 44.31288543246071 >50 1.3789786817915848 21.195388202263246 >100 0.08488546285502382 2.7919013925604204 >500 8.661781915093722E-4 0.12919226582811394 >1k 5.774521276729148E-4 0.19620607161349302 >5k 0.0 0.0 >10k+ 2.887260638364574E-4 0.8369915377055985 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12290 0.8333921025079066 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1848 0.12531396301339395 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011663420799947921 0.0 2 0.0 0.0 0.0 0.03885546580447767 0.0 3 0.0 0.0 0.0 0.05709651345090785 0.0 4 0.0 0.0 0.0 0.0796774386042954 0.0 5 0.0 0.0 0.0 0.13379028626917006 0.0 6 0.0 0.0 0.0 0.2108909226037095 0.0 7 0.0 0.0 0.0 0.2547643717756066 0.0 8 0.0 0.0 0.0 0.3679402398867292 0.0 9 0.0 0.0 0.0 0.42232432989578866 0.0 10 0.0 0.0 0.0 0.5085115847605202 0.0 11 0.0 0.0 0.0 0.5868328116438913 0.0 12 0.0 0.0 0.0 0.6576948740621796 0.0 13 0.0 0.0 0.0 0.6913967353271454 0.0 14 0.0 0.0 0.0 0.7093665406293908 0.0 15 0.0 0.0 0.0 0.7313371705083624 0.0 16 0.0 0.0 0.0 0.7730406809267808 0.0 17 0.0 0.0 0.0 0.8216608711219126 0.0 18 0.0 0.0 0.0 0.8915057747495077 0.0 19 0.0 0.0 0.0 0.9246651513261038 0.0 20 0.0 0.0 0.0 0.9615541101352414 0.0 21 0.0 0.0 0.0 1.00719063454434 0.0 22 0.0 0.0 0.0 1.055539582395287 0.0 23 0.0 0.0 0.0 1.110805210022947 0.0 24 0.0 0.0 0.0 1.156848597948323 0.0 25 0.0 0.0 0.0 1.1986877295388338 0.0 26 0.0 0.0 0.0 1.2386959753060969 0.0 27 0.0 0.0 0.0 1.2839256361989182 0.0 28 0.0 0.0 0.0 1.3301046452963865 0.0 29 0.0 0.0 0.0 1.3821153647938287 0.0 30 0.0 0.0 0.0 1.4554864188958268 0.0 31 6.781058604620885E-5 0.0 0.0 1.514074765239751 0.0 32 6.781058604620885E-5 0.0 0.0 1.5822922148022371 0.0 33 6.781058604620885E-5 0.0 0.0 1.650102800848446 0.0 34 6.781058604620885E-5 0.0 0.0 1.711471381220265 0.0 35 6.781058604620885E-5 0.0 0.0 1.7824690648106458 0.0 36 6.781058604620885E-5 0.0 0.0 1.8456685310057124 0.0 37 6.781058604620885E-5 0.0 0.0 1.9126653900193666 0.0 38 6.781058604620885E-5 0.0 0.0 1.9876638981864736 0.0 39 6.781058604620885E-5 0.0 0.0 2.0940587076929753 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGAT 20 7.033937E-4 45.0 44 TAGCCGA 20 7.033937E-4 45.0 39 GGGCGTA 20 7.033937E-4 45.0 8 TAATGCG 35 1.2122473E-7 45.0 1 CGTTTTT 9775 0.0 42.05371 1 CGATCTC 55 6.184564E-11 40.909092 10 TACGGGA 370 0.0 40.743244 4 CGACGGT 75 0.0 39.0 28 TAACGGG 435 0.0 38.275864 3 ACGGGAT 505 0.0 37.87129 5 CGTTAGG 245 0.0 37.65306 2 AGGGCGA 1555 0.0 37.62058 6 CGAACGC 30 1.1400785E-4 37.500004 41 CCACTCG 30 1.1400785E-4 37.500004 29 CGTAAGG 180 0.0 37.5 2 GGGCGAT 3390 0.0 37.300884 7 GGCACCG 725 0.0 37.241383 8 CGGTCTA 85 0.0 37.058823 31 GCGATGT 445 0.0 36.91011 9 GACCGAT 865 0.0 36.6763 9 >>END_MODULE