SRR1545461_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545461_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1773899
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9978	0.5624897471614787	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	9527	0.5370655262785536	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGATCG	40	6.8193913E-9	45.000004	20
AACCGTA	20	7.034323E-4	45.000004	10
ACTATCG	20	7.034323E-4	45.000004	1
CGACGGT	130	0.0	45.000004	28
CCACTCG	20	7.034323E-4	45.000004	34
CTACGTT	20	7.034323E-4	45.000004	41
CGTAGAT	40	6.8193913E-9	45.000004	31
ACTACGT	20	7.034323E-4	45.000004	31
CGAATCG	20	7.034323E-4	45.000004	12
CCGAATC	20	7.034323E-4	45.000004	11
CGGTCTA	130	0.0	45.000004	31
GAACCGT	20	7.034323E-4	45.000004	9
AGGATCG	40	6.8193913E-9	45.000004	18
TATACGC	20	7.034323E-4	45.000004	20
CGCCGAT	20	7.034323E-4	45.000004	21
ACGTTCA	25	3.891666E-5	45.0	13
ATTAACG	25	3.891666E-5	45.0	1
GGGCGTA	45	3.8562575E-10	45.0	7
AACGCCA	50	2.1827873E-11	45.0	11
CGCATCC	30	2.1661726E-6	44.999996	26