##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545460_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1109075 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.92693550932083 31.0 31.0 33.0 28.0 34.0 2 31.214451682708564 31.0 31.0 34.0 28.0 34.0 3 31.314997633162772 31.0 31.0 34.0 28.0 34.0 4 35.1526650587201 35.0 35.0 37.0 32.0 37.0 5 35.01822149088204 35.0 35.0 37.0 32.0 37.0 6 35.071098888713564 37.0 35.0 37.0 32.0 37.0 7 35.56009196853233 37.0 35.0 37.0 35.0 37.0 8 35.47813357978496 37.0 35.0 37.0 35.0 37.0 9 37.15017199017199 39.0 37.0 39.0 34.0 39.0 10 36.524971710659784 39.0 35.0 39.0 32.0 39.0 11 36.23217906814237 38.0 35.0 39.0 31.0 39.0 12 35.52451096634583 37.0 35.0 39.0 30.0 39.0 13 35.086615422762215 37.0 34.0 39.0 29.0 39.0 14 36.102139170029076 38.0 35.0 40.0 30.0 41.0 15 36.41378716497982 38.0 35.0 40.0 31.0 41.0 16 36.48558303090413 38.0 35.0 40.0 31.0 41.0 17 36.39119356220274 38.0 35.0 40.0 31.0 41.0 18 36.34678808917341 38.0 35.0 40.0 31.0 41.0 19 36.25574014381354 37.0 35.0 40.0 30.0 41.0 20 36.11570903680995 37.0 34.0 40.0 30.0 41.0 21 35.94635890268918 37.0 34.0 40.0 30.0 41.0 22 35.84045623605257 37.0 34.0 40.0 30.0 41.0 23 35.777727385433806 37.0 34.0 40.0 30.0 41.0 24 35.66116718887361 37.0 34.0 40.0 29.0 41.0 25 35.52058427067601 36.0 34.0 40.0 29.0 41.0 26 35.360222708112616 36.0 34.0 40.0 29.0 41.0 27 35.263536731059666 36.0 34.0 40.0 29.0 41.0 28 35.312530712530716 36.0 34.0 40.0 29.0 41.0 29 35.3369844239569 36.0 34.0 40.0 29.0 41.0 30 35.2317228320898 36.0 34.0 40.0 29.0 41.0 31 35.09093433717287 36.0 34.0 40.0 27.0 41.0 32 34.88428555327638 36.0 34.0 40.0 27.0 41.0 33 34.65268534589635 36.0 33.0 40.0 25.0 41.0 34 34.48715551247661 36.0 33.0 40.0 24.0 41.0 35 34.33514685661475 36.0 33.0 40.0 24.0 41.0 36 34.15655568829881 36.0 33.0 40.0 23.0 41.0 37 34.1142573766427 36.0 33.0 40.0 23.0 41.0 38 34.065101999413926 36.0 33.0 40.0 23.0 41.0 39 33.99708766314271 36.0 33.0 40.0 23.0 41.0 40 33.83671077249059 35.0 33.0 40.0 23.0 41.0 41 33.76583278858508 35.0 33.0 40.0 23.0 41.0 42 33.72315668462458 35.0 33.0 40.0 23.0 41.0 43 33.66026012668215 35.0 33.0 40.0 23.0 41.0 44 33.582389829362306 35.0 32.0 40.0 23.0 41.0 45 33.53294592340464 35.0 32.0 40.0 23.0 41.0 46 33.47929851452787 35.0 32.0 39.0 23.0 41.0 47 33.372073123999726 35.0 32.0 39.0 23.0 41.0 48 33.31929130130965 35.0 32.0 39.0 22.0 41.0 49 33.34881590514618 35.0 32.0 39.0 22.0 41.0 50 33.256292856659826 35.0 32.0 39.0 22.0 41.0 51 33.06997903658454 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 4.0 12 5.0 13 5.0 14 22.0 15 49.0 16 161.0 17 418.0 18 885.0 19 1726.0 20 2824.0 21 4302.0 22 6389.0 23 9128.0 24 12585.0 25 17302.0 26 22061.0 27 26167.0 28 28763.0 29 31948.0 30 37217.0 31 44339.0 32 54276.0 33 68028.0 34 107227.0 35 138116.0 36 84410.0 37 99902.0 38 133843.0 39 176909.0 40 63.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.28584631336925 23.53582940738904 27.059666839483356 16.11865743975836 2 32.29727475599035 26.082906926943622 28.752789486734443 12.867028830331584 3 29.841444446949033 24.66541938101571 32.115681987241615 13.377454184793635 4 27.185267001780762 27.352072673173588 30.53481504857652 14.927845276469128 5 23.44900029303699 31.64474900254717 30.3773865608728 14.528864143543045 6 21.839009985798977 40.82032324234159 27.446205170975812 9.89446160088362 7 84.40348939431507 5.123098077226517 8.393390888803733 2.080021639654667 8 85.73991840046887 4.246421567522485 8.01947568920046 1.994184342808196 9 80.33523431688569 6.331402294705047 9.906724071861687 3.4266393165475737 10 47.85366183531321 23.686856163920382 16.355250997452835 12.104231003313572 11 41.640105493316504 22.544733223632306 21.67130266212835 14.143858620922842 12 37.93034736154002 22.034488199625816 26.40759191217907 13.627572526655097 13 22.515339359376057 34.85913937290084 26.606135743750425 16.01938552397268 14 17.34111759799833 37.544620517097584 28.924193584744046 16.190068300160043 15 16.893447242071094 23.686856163920382 44.24669206320582 15.173004530802697 16 18.968599959425646 19.5947974663571 42.972116403309066 18.464486170908188 17 18.467551788652706 20.012172305750287 31.008272659648807 30.5120032459482 18 22.757703491648446 23.21664450104817 33.75082839303023 20.274823614273156 19 30.428059418885105 23.548813200189347 26.6313820075288 19.39174537339675 20 31.865834141063498 21.994545003719317 27.147758267024326 18.991862588192863 21 24.052115501656786 27.32520343529518 28.187543673782205 20.43513738926583 22 23.654126186236276 24.6946329148164 27.09429028695084 24.556950611996484 23 22.191646191646193 28.52358947771792 26.93623064265266 22.34853368798323 24 21.280165904019118 23.430786917025447 36.58968058968059 18.699366589274845 25 19.81398913509005 24.988571557378897 34.88880373284043 20.30863557469062 26 18.774654554471066 31.74672587516624 28.338029438946872 21.14059013141582 27 19.52212429276649 31.35378581250141 30.03818497396479 19.085904920767305 28 17.605752541532357 27.99783603453328 36.42909631900458 17.967315104929785 29 19.357392421612605 25.185853075761333 35.062822622455656 20.393931880170413 30 19.904695354236637 29.703040822306875 30.52092960349841 19.871334219958072 31 27.987016207199694 26.70279286793048 26.185244460473818 19.124946464396007 32 29.829722967337645 25.781123909564275 27.03865834141064 17.35049478168744 33 27.71047945359872 27.541870477650292 25.573202894303808 19.174447174447174 34 21.011653855690554 27.21051326555914 29.053039695241527 22.72479318350878 35 22.36386177670581 25.913576629172958 30.161891666478823 21.560669927642405 36 28.1328133805198 27.762955616166625 25.148524671460454 18.95570633185312 37 22.31174627504903 33.11840948538196 27.041363298244033 17.52848094132498 38 22.06721817730992 32.39853030678719 24.950341500800217 20.583910015102674 39 22.712981538669613 31.24630886098776 26.09679237202173 19.9439172283209 40 24.613935035953386 26.54274958862115 26.190924869823952 22.652390505601513 41 18.311746275049025 26.45267452606902 27.77783287875031 27.457746320131644 42 21.35049478168744 26.635619773234453 25.93296215314564 26.080923291932468 43 22.585307576133264 27.079863850506054 26.19254784392399 24.142280729436692 44 20.611500574803326 29.639654667177602 28.756576426301194 20.992268331717874 45 19.284268421883098 34.42409214886279 24.660009467348917 21.63162996190519 46 21.37384757568244 32.83006108694182 26.034578364853594 19.761512972522148 47 22.886910263057054 27.188512949980844 27.91542501634245 22.00915177061966 48 22.649865879223675 25.45995536821225 30.799540157338324 21.09063859522575 49 21.93963438000135 26.53842165768771 31.212587065798076 20.30935689651286 50 19.87557198566373 32.170141784820686 27.319883686856162 20.634402542659423 51 19.230529946126275 32.62565651556477 26.351689470955524 21.792124067353424 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 611.0 1 1362.5 2 2114.0 3 7542.0 4 12970.0 5 9571.5 6 6173.0 7 6198.0 8 6223.0 9 6459.0 10 6695.0 11 6605.0 12 6515.0 13 6554.0 14 6593.0 15 6238.5 16 5884.0 17 5768.0 18 5652.0 19 5145.5 20 4639.0 21 5145.5 22 5652.0 23 5574.5 24 5497.0 25 6739.5 26 9203.5 27 10425.0 28 12224.5 29 14024.0 30 15919.0 31 17814.0 32 20609.0 33 23404.0 34 24255.5 35 25107.0 36 27301.0 37 29495.0 38 35294.0 39 41093.0 40 55865.5 41 70638.0 42 81803.5 43 92969.0 44 94397.5 45 95826.0 46 93901.5 47 91977.0 48 86590.0 49 81203.0 50 78084.0 51 74965.0 52 70791.5 53 66618.0 54 63307.5 55 59997.0 56 57883.0 57 55769.0 58 53944.5 59 52120.0 60 48028.0 61 43936.0 62 37989.0 63 32042.0 64 25744.0 65 19446.0 66 15395.0 67 11344.0 68 8750.0 69 6156.0 70 5152.5 71 4149.0 72 3360.5 73 2572.0 74 2010.5 75 1066.5 76 684.0 77 524.5 78 365.0 79 272.5 80 180.0 81 122.5 82 65.0 83 40.5 84 16.0 85 13.5 86 11.0 87 10.0 88 9.0 89 5.5 90 2.0 91 3.5 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1109075.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.37348738980491 #Duplication Level Percentage of deduplicated Percentage of total 1 78.46906255813721 15.20219393959884 2 5.476195801761622 2.121860206190628 3 2.050912497918929 1.1919998224807702 4 1.3013543631930933 1.0084708937995597 5 0.8700156710350657 0.8427618815865252 6 0.7009335925271813 0.8147716869549602 7 0.6019375618969858 0.8163140835402818 8 0.5206587116947923 0.8069579988328903 9 0.43353568006870724 0.7559188227757436 >10 6.743929605754492 31.804935029694153 >50 2.418620053578471 32.85314411672089 >100 0.4091035273265208 10.377404028288264 >500 0.0014026406651195 0.15280869189569596 >1k 0.0018701875534926666 0.62165148339073 >5k 4.6754688837316664E-4 0.6288073142501015 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6942 0.6259270112481121 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2885 0.26012668214503076 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1654 0.14913328674796564 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1260 0.11360818700268242 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004057435250095801 0.0 2 0.0 0.0 0.0 0.017762549872641614 0.0 3 0.0 0.0 0.0 0.026959403106192097 0.0 4 0.0 0.0 0.0 0.04463178775105381 0.0 5 0.0 0.0 0.0 0.07736176543515993 0.0 6 0.0 0.0 0.0 0.12650181457520907 0.0 7 0.0 0.0 0.0 0.156526835425918 0.0 8 0.0 0.0 0.0 0.25129048982259994 0.0 9 0.0 0.0 0.0 0.2916845118679981 0.0 10 0.0 0.0 0.0 0.3550706669972725 0.0 11 0.0 0.0 0.0 0.4061041859206997 0.0 12 0.0 0.0 0.0 0.4535310957329306 0.0 13 0.0 0.0 0.0 0.4737281067556297 0.0 14 0.0 0.0 0.0 0.48256429907806053 0.0 15 0.0 0.0 0.0 0.4930234655005297 0.0 16 0.0 0.0 0.0 0.5165565899510853 0.0 17 0.0 0.0 0.0 0.5459504542073349 0.0 18 0.0 0.0 0.0 0.5901314158194892 0.0 19 0.0 0.0 0.0 0.6117710704866668 0.0 20 9.016522777990667E-5 0.0 0.0 0.6344025426594234 0.0 21 9.016522777990667E-5 0.0 0.0 0.6653292157879314 0.0 22 9.016522777990667E-5 0.0 0.0 0.6985100196109371 0.0 23 9.016522777990667E-5 0.0 0.0 0.7344859454951198 0.0 24 9.016522777990667E-5 0.0 0.0 0.7619863399679914 0.0 25 9.016522777990667E-5 0.0 0.0 0.7886752473908437 0.0 26 9.016522777990667E-5 0.0 0.0 0.8149133286747966 0.0 27 9.016522777990667E-5 0.0 0.0 0.837634966075333 0.0 28 9.016522777990667E-5 0.0 0.0 0.8638730473592859 0.0 29 9.016522777990667E-5 0.0 0.0 0.894709555260014 0.0 30 9.016522777990667E-5 0.0 0.0 0.9351937425331921 0.0 31 9.016522777990667E-5 0.0 0.0 0.9742352861618917 0.0 32 9.016522777990667E-5 0.0 0.0 1.0143588125239502 0.0 33 9.016522777990667E-5 0.0 0.0 1.0527691995581905 0.0 34 9.016522777990667E-5 0.0 0.0 1.089827108175732 0.0 35 9.016522777990667E-5 0.0 0.0 1.1425737664269775 0.0 36 9.016522777990667E-5 0.0 0.0 1.18846786736695 0.0 37 9.016522777990667E-5 0.0 0.0 1.232738994206884 0.0 38 9.016522777990667E-5 0.0 0.0 1.2789937560579763 0.0 39 9.016522777990667E-5 0.0 0.0 1.3318305795370016 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTTCGA 30 2.1654323E-6 45.000004 27 ATGTCGC 20 7.033179E-4 45.0 25 CGTCGAA 25 3.8907165E-5 45.0 27 ACCCGTA 25 3.8907165E-5 45.0 33 CCTATAC 20 7.033179E-4 45.0 28 TGTCGTT 20 7.033179E-4 45.0 28 TCGAATC 20 7.033179E-4 45.0 30 CATACGA 290 0.0 44.224136 18 ATACGAA 290 0.0 44.224136 19 CGCATCG 65 0.0 41.538464 21 ACGGGTA 170 0.0 41.02941 5 CGGTCTA 55 6.184564E-11 40.909092 31 TACGAAA 310 0.0 40.645164 20 GTTGATC 295 0.0 40.42373 16 CGTAAGG 195 0.0 40.384617 2 CGTTTTT 5420 0.0 40.226017 1 GCGTAAG 90 0.0 40.0 1 GGCCTAT 175 0.0 39.857143 8 CGGGATA 130 0.0 39.807693 6 ACGGGCT 165 0.0 39.545452 5 >>END_MODULE