##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545459_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1269621 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.88833518034122 31.0 31.0 33.0 28.0 34.0 2 31.175457872861273 31.0 31.0 34.0 28.0 34.0 3 31.26571945486094 31.0 31.0 34.0 28.0 34.0 4 35.09625313380922 35.0 35.0 37.0 32.0 37.0 5 34.960811927338945 35.0 35.0 37.0 32.0 37.0 6 35.01769189388014 37.0 35.0 37.0 32.0 37.0 7 35.52607352902953 37.0 35.0 37.0 35.0 37.0 8 35.44773046444569 37.0 35.0 37.0 35.0 37.0 9 37.143251411247924 39.0 37.0 39.0 34.0 39.0 10 36.534307482311654 39.0 35.0 39.0 32.0 39.0 11 36.199543013229935 38.0 35.0 39.0 31.0 39.0 12 35.37606813371865 37.0 35.0 39.0 30.0 39.0 13 34.84105177844412 37.0 33.0 39.0 27.0 39.0 14 35.81864036590447 38.0 34.0 40.0 28.0 41.0 15 36.208614224244876 38.0 34.0 40.0 30.0 41.0 16 36.325569599116584 38.0 35.0 40.0 31.0 41.0 17 36.252076013235445 38.0 34.0 40.0 31.0 41.0 18 36.19207464274772 37.0 35.0 40.0 30.0 41.0 19 36.091244552508186 37.0 35.0 40.0 30.0 41.0 20 35.937467953034805 37.0 34.0 40.0 30.0 41.0 21 35.75650056197873 36.0 34.0 40.0 30.0 41.0 22 35.631717654323616 36.0 34.0 40.0 30.0 41.0 23 35.571016862512515 36.0 34.0 40.0 29.0 41.0 24 35.47473852433128 36.0 34.0 40.0 29.0 41.0 25 35.31638103024446 36.0 34.0 40.0 29.0 41.0 26 35.14935559509492 35.0 34.0 40.0 29.0 41.0 27 35.026863922383136 36.0 34.0 40.0 27.0 41.0 28 35.07969071084993 36.0 34.0 40.0 28.0 41.0 29 35.135872831341004 36.0 34.0 40.0 29.0 41.0 30 35.038858052915 36.0 34.0 40.0 28.0 41.0 31 34.870189607764836 36.0 34.0 40.0 27.0 41.0 32 34.62899164396304 35.0 33.0 40.0 26.0 41.0 33 34.371163520452164 35.0 33.0 40.0 24.0 41.0 34 34.210655778377955 35.0 33.0 40.0 24.0 41.0 35 34.02569979545077 35.0 33.0 40.0 23.0 41.0 36 33.81339864416231 35.0 33.0 40.0 23.0 41.0 37 33.75064448366875 35.0 33.0 40.0 23.0 41.0 38 33.73037859329674 35.0 33.0 40.0 23.0 41.0 39 33.683444902061325 35.0 33.0 40.0 23.0 41.0 40 33.51357294814752 35.0 32.0 40.0 22.0 41.0 41 33.46203709610978 35.0 32.0 40.0 22.0 41.0 42 33.40932293968042 35.0 32.0 40.0 22.0 41.0 43 33.30960893053911 35.0 32.0 39.0 22.0 41.0 44 33.2339099621068 35.0 32.0 39.0 21.0 41.0 45 33.17819648540785 35.0 32.0 39.0 22.0 41.0 46 33.12784051303499 35.0 32.0 39.0 22.0 41.0 47 33.03984102342353 35.0 32.0 39.0 22.0 41.0 48 33.004527335322905 35.0 32.0 39.0 21.0 41.0 49 33.03835002729161 35.0 32.0 39.0 21.0 41.0 50 32.905902627634546 35.0 32.0 39.0 20.0 40.0 51 32.73003990954781 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 10.0 14 27.0 15 78.0 16 194.0 17 553.0 18 1155.0 19 2248.0 20 3570.0 21 5592.0 22 8068.0 23 11473.0 24 15334.0 25 21285.0 26 27350.0 27 31426.0 28 34068.0 29 37957.0 30 44226.0 31 52862.0 32 64247.0 33 81497.0 34 128855.0 35 168538.0 36 92414.0 37 107307.0 38 142539.0 39 186663.0 40 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.80987003208044 23.54623938955011 27.3457984705672 16.29809210780225 2 32.23284744029911 26.281543862302215 28.905949098195443 12.579659599203227 3 29.32670458349381 24.418468188538153 32.605714618772055 13.649112609195974 4 26.467819924213604 27.222218284039094 31.243182020461223 15.066779771286075 5 22.501124351282783 32.21457427058942 30.8797664814933 14.404534896634507 6 22.158108600913188 39.262740613143606 28.559152692023844 10.019998093919366 7 83.4266288916141 5.551656754259736 9.077039525968774 1.9446748281573791 8 84.79420236432762 4.627050119681385 8.616193336436622 1.962554179554371 9 80.17707646612651 6.091896715634036 10.56740554858497 3.163621269654487 10 50.57989746546411 22.292558172872063 15.996899862242353 11.13064449942148 11 44.673174120465866 21.698916448294412 20.84417318239065 12.783736248849065 12 40.4477399160852 21.086371444706728 25.248322137078706 13.217566502129378 13 21.983962143033235 38.30284785774653 24.829535743343882 14.88365425587636 14 15.515181302136622 40.927016802652126 28.35121662291345 15.206585272297795 15 15.487062674609195 22.507976789923923 47.330660094626666 14.674300440840218 16 16.297619525827 18.13887766506698 46.49836447254732 19.065138336558704 17 16.872830553369862 18.763867327336268 31.049029592295653 33.31427252699821 18 21.371574666770634 22.556180151399513 35.23161636425358 20.840628817576267 19 30.46594219849861 22.826890859555725 26.605971388311943 20.101195553633723 20 31.930710030788717 21.969627156450624 26.722620372536372 19.377042440224287 21 23.156201732643048 27.166689901947116 29.099077598747975 20.57803076666186 22 23.80513554832505 25.40112364240982 25.38119643578674 25.412544373478386 23 20.566452508268217 30.285100829302603 26.09400758179016 23.054439080639025 24 20.02605501956883 23.29923654381898 39.7409935720975 16.933714864514684 25 18.29404208027435 24.497074323754884 37.37524820399158 19.833635391979183 26 18.082325355361956 33.42430536356913 27.962202893619438 20.531166387449485 27 19.563318502135676 33.858293144174525 28.67777076781181 17.90061758587799 28 16.105042370912265 28.92532495918073 37.54663793368257 17.42299473622443 29 16.53091749427585 24.806457990219126 37.326020914902955 21.336603600602068 30 18.875317909832933 30.457199431956468 31.46568936714185 19.201793291068753 31 28.61554747440378 26.28879011925606 25.70609654377172 19.389565862568436 32 30.24059935996648 25.525964047538597 27.591777388685284 16.641659203809642 33 28.220941525069293 27.051301136323357 25.509817496717524 19.217939841889827 34 20.06409786857653 27.65053508094148 28.868378831163 23.416988219318995 35 22.03350448677204 24.31536655427092 31.169931814297335 22.481197144659706 36 29.63238635781859 26.16363465947712 25.890167223131943 18.313811759572346 37 20.455947089722052 33.707933312382195 28.24031738605458 17.59580221184117 38 20.848347656505368 33.36696541723869 24.380740394180624 21.40394653207532 39 21.802805719187067 31.707572574807756 26.685286396491552 19.804335309513625 40 24.134131366762208 26.775785844752097 26.02036355731356 23.069719231172137 41 18.335077948458633 25.662067656410848 27.265695825762176 28.737158569368336 42 21.331090144224145 26.860929363959794 24.931219631685362 26.876760860130698 43 22.096200362155322 26.676858684599576 26.558713190786857 24.668227762458244 44 20.010381050723012 30.735550215379238 28.048212813115097 21.20585592078266 45 17.90148398616595 36.497269657637986 23.74519640113073 21.85604995506533 46 20.846929910579615 33.32742605864269 25.64347943205098 20.182164598726708 47 22.386444458621906 28.256306409550568 26.854391979968828 22.502857151858706 48 23.389657228416986 24.286854108430784 30.946479303666212 21.37700935948602 49 21.409144933803077 26.2018350358099 31.41630455072813 20.97271547965889 50 19.63743510858752 33.748339071266145 26.86108689128488 19.753138928861446 51 19.405554886064426 33.07884793966073 24.52944618905957 22.98615098521527 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1196.0 1 2135.5 2 3075.0 3 9199.5 4 15324.0 5 11465.0 6 7606.0 7 7698.0 8 7790.0 9 8054.0 10 8318.0 11 8405.0 12 8492.0 13 8347.5 14 8203.0 15 7813.0 16 7423.0 17 7087.5 18 6752.0 19 6287.5 20 5823.0 21 6049.0 22 6275.0 23 5864.0 24 5453.0 25 6405.5 26 9059.0 27 10760.0 28 12856.0 29 14952.0 30 17841.0 31 20730.0 32 23851.5 33 26973.0 34 28076.0 35 29179.0 36 31331.5 37 33484.0 38 38941.5 39 44399.0 40 64276.5 41 84154.0 42 99573.0 43 114992.0 44 116230.0 45 117468.0 46 112812.5 47 108157.0 48 98798.0 49 89439.0 50 86089.5 51 82740.0 52 81422.5 53 80105.0 54 74305.5 55 68506.0 56 64614.5 57 60723.0 58 57712.0 59 54701.0 60 51297.0 61 47893.0 62 39886.0 63 31879.0 64 25778.0 65 19677.0 66 15753.0 67 11829.0 68 9675.0 69 7521.0 70 5913.0 71 4305.0 72 3518.5 73 2732.0 74 2136.5 75 1231.0 76 921.0 77 692.5 78 464.0 79 311.5 80 159.0 81 126.0 82 93.0 83 56.0 84 19.0 85 17.5 86 16.0 87 15.5 88 15.0 89 8.0 90 1.0 91 2.5 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1269621.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.150089769524925 #Duplication Level Percentage of deduplicated Percentage of total 1 80.11294844828679 15.341701544860145 2 5.737552353711376 2.1974928526184376 3 2.220431776955414 1.2756440356740577 4 1.2113481874512044 0.927897061273675 5 0.7890409187140882 0.7555102212601605 6 0.6035261824587816 0.6934548343406608 7 0.4813017628720542 0.6451880375661306 8 0.40114964412279897 0.6145641356771662 9 0.33721563443973224 0.5811938704087356 >10 5.128050313782753 23.599400808123036 >50 2.1081892354882408 29.206435202315014 >100 0.8622154873831951 22.238818090227834 >500 0.004962391294291771 0.6124698887901306 >1k 0.0016541304314305902 0.658242787124847 >5k 4.1353260785764756E-4 0.6519866297399982 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8233 0.6484612337067519 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3349 0.26377950585253396 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1902 0.14980848615452957 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1533 0.12074469467660033 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1528 0.12035087636389127 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 7.876366254181365E-5 0.009766694155184894 0.0 2 0.0 0.0 7.876366254181365E-5 0.04072081353411766 0.0 3 0.0 0.0 7.876366254181365E-5 0.056867364355189465 0.0 4 0.0 0.0 7.876366254181365E-5 0.09081450291071115 0.0 5 0.0 0.0 7.876366254181365E-5 0.15303779631874395 0.0 6 0.0 0.0 7.876366254181365E-5 0.23046247659734675 0.0 7 0.0 0.0 7.876366254181365E-5 0.2777994377849768 0.0 8 0.0 0.0 7.876366254181365E-5 0.4146906832826489 0.0 9 0.0 0.0 7.876366254181365E-5 0.4700615380495439 0.0 10 0.0 0.0 7.876366254181365E-5 0.5374044695227946 0.0 11 0.0 0.0 7.876366254181365E-5 0.6024632547823326 0.0 12 0.0 0.0 7.876366254181365E-5 0.6702787682308342 0.0 13 0.0 0.0 7.876366254181365E-5 0.6988699777335126 0.0 14 0.0 0.0 7.876366254181365E-5 0.710133181476992 0.0 15 0.0 0.0 7.876366254181365E-5 0.7279337692114418 0.0 16 0.0 0.0 7.876366254181365E-5 0.769284692045894 0.0 17 0.0 0.0 7.876366254181365E-5 0.8104780875552625 0.0 18 0.0 0.0 7.876366254181365E-5 0.8785298919913895 0.0 19 0.0 0.0 7.876366254181365E-5 0.9031041547044354 0.0 20 7.876366254181365E-5 0.0 7.876366254181365E-5 0.9309077275816956 0.0 21 7.876366254181365E-5 0.0 7.876366254181365E-5 0.9680054126388898 0.0 22 7.876366254181365E-5 0.0 7.876366254181365E-5 1.0112466633743455 0.0 23 7.876366254181365E-5 0.0 7.876366254181365E-5 1.0619704620512735 0.0 24 7.876366254181365E-5 0.0 7.876366254181365E-5 1.0996194927462606 0.0 25 7.876366254181365E-5 0.0 7.876366254181365E-5 1.1327002310138223 0.0 26 7.876366254181365E-5 0.0 7.876366254181365E-5 1.164914568993424 0.0 27 7.876366254181365E-5 0.0 7.876366254181365E-5 1.1984678892362366 0.0 28 7.876366254181365E-5 0.0 7.876366254181365E-5 1.229658299602795 0.0 29 7.876366254181365E-5 0.0 7.876366254181365E-5 1.2688038398860761 0.0 30 7.876366254181365E-5 0.0 7.876366254181365E-5 1.3178736016496262 0.0 31 7.876366254181365E-5 0.0 7.876366254181365E-5 1.3611148523850818 0.0 32 7.876366254181365E-5 0.0 7.876366254181365E-5 1.406719012996792 0.0 33 7.876366254181365E-5 0.0 7.876366254181365E-5 1.4479124085061605 0.0 34 7.876366254181365E-5 0.0 7.876366254181365E-5 1.492492641504827 0.0 35 7.876366254181365E-5 0.0 7.876366254181365E-5 1.5452642954078422 0.0 36 7.876366254181365E-5 0.0 7.876366254181365E-5 1.5963031487349375 0.0 37 1.575273250836273E-4 0.0 7.876366254181365E-5 1.6441126918978184 0.0 38 1.575273250836273E-4 0.0 7.876366254181365E-5 1.6938913266242446 0.0 39 1.575273250836273E-4 0.0 7.876366254181365E-5 1.7502861090041832 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATC 20 7.033566E-4 45.0 9 ATAATCG 20 7.033566E-4 45.0 44 CGACACT 20 7.033566E-4 45.0 18 TCGATAG 40 6.8157533E-9 45.0 1 ATTCACG 20 7.033566E-4 45.0 39 CGTAGCA 20 7.033566E-4 45.0 28 TCATCGG 50 2.1827873E-11 45.0 44 CTCGAGG 25 3.8910373E-5 45.0 2 TATAGCG 35 1.2120654E-7 45.0 1 TACTAGC 35 1.2120654E-7 45.0 36 TTACGAC 25 3.8910373E-5 45.0 14 ATAACGG 50 2.1827873E-11 45.0 2 ACCGTCC 20 7.033566E-4 45.0 27 ACTCGAC 30 2.1656815E-6 44.999996 34 ACGTAAG 60 0.0 44.999996 1 GGCCTAT 440 0.0 41.931816 8 ACGTATG 70 0.0 41.785713 1 TCGATGG 125 0.0 41.399998 2 GTCGATG 60 3.6379788E-12 41.249996 1 CGTTGAT 445 0.0 40.95506 25 >>END_MODULE