##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545458_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1342939 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.921738813155326 31.0 31.0 33.0 28.0 34.0 2 31.231070063495064 31.0 31.0 34.0 28.0 34.0 3 31.301919893606485 31.0 31.0 34.0 28.0 34.0 4 35.14178008085252 35.0 35.0 37.0 32.0 37.0 5 34.99668637220306 35.0 35.0 37.0 32.0 37.0 6 35.039222928219374 37.0 35.0 37.0 32.0 37.0 7 35.545901191342274 37.0 35.0 37.0 35.0 37.0 8 35.478296482565476 37.0 35.0 37.0 35.0 37.0 9 37.16772541418486 39.0 37.0 39.0 34.0 39.0 10 36.576352313842996 39.0 35.0 39.0 32.0 39.0 11 36.23719469015346 38.0 35.0 39.0 31.0 39.0 12 35.24542589052816 37.0 35.0 39.0 30.0 39.0 13 34.664954253320516 37.0 33.0 39.0 27.0 39.0 14 35.606369313870545 37.0 33.0 40.0 27.0 41.0 15 36.032536101788686 37.0 34.0 40.0 30.0 41.0 16 36.204164150419345 37.0 34.0 40.0 31.0 41.0 17 36.11392848074261 37.0 34.0 40.0 31.0 41.0 18 36.0309820475837 37.0 34.0 40.0 30.0 41.0 19 35.89195265012037 37.0 34.0 40.0 30.0 41.0 20 35.71371074933411 36.0 34.0 40.0 30.0 41.0 21 35.52667917157816 36.0 34.0 40.0 29.0 41.0 22 35.39260234455921 35.0 34.0 40.0 29.0 41.0 23 35.36084066364891 35.0 34.0 40.0 29.0 41.0 24 35.26018679925149 35.0 34.0 40.0 29.0 41.0 25 35.123666823288325 35.0 34.0 40.0 29.0 41.0 26 34.959553635719864 35.0 34.0 40.0 29.0 41.0 27 34.842677887826625 35.0 34.0 40.0 27.0 41.0 28 34.8923763476971 35.0 34.0 40.0 27.0 41.0 29 34.96899859189435 36.0 34.0 40.0 29.0 41.0 30 34.876331687440754 36.0 34.0 40.0 28.0 41.0 31 34.6432198335144 35.0 33.0 40.0 27.0 41.0 32 34.37895243194218 35.0 33.0 40.0 25.0 41.0 33 34.10890070211678 35.0 33.0 40.0 24.0 41.0 34 33.901647803809404 35.0 33.0 40.0 23.0 41.0 35 33.70476023110506 35.0 33.0 40.0 23.0 41.0 36 33.47575355246962 35.0 33.0 40.0 21.0 41.0 37 33.41268814145691 35.0 32.0 40.0 22.0 41.0 38 33.4146554683422 35.0 32.0 40.0 22.0 41.0 39 33.37051869072236 35.0 32.0 40.0 22.0 41.0 40 33.192583579745616 35.0 32.0 39.0 21.0 41.0 41 33.15146927745788 35.0 32.0 39.0 21.0 41.0 42 33.10437853096827 35.0 32.0 39.0 21.0 41.0 43 32.99649500088984 35.0 32.0 39.0 20.0 41.0 44 32.937090962433885 35.0 32.0 39.0 20.0 41.0 45 32.88207431610818 35.0 32.0 39.0 20.0 41.0 46 32.82070444003786 35.0 32.0 39.0 20.0 41.0 47 32.736066939749314 35.0 31.0 39.0 20.0 41.0 48 32.724962191134516 35.0 31.0 39.0 20.0 41.0 49 32.77059270748708 35.0 32.0 39.0 20.0 41.0 50 32.68300496150607 35.0 31.0 39.0 20.0 40.0 51 32.499007773249566 35.0 31.0 38.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 7.0 14 22.0 15 83.0 16 219.0 17 646.0 18 1330.0 19 2566.0 20 4238.0 21 6457.0 22 9420.0 23 12965.0 24 17760.0 25 24296.0 26 31385.0 27 35935.0 28 37943.0 29 41564.0 30 47247.0 31 56192.0 32 69034.0 33 86626.0 34 142600.0 35 188660.0 36 90895.0 37 104650.0 38 140371.0 39 189720.0 40 104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.51596386730894 24.434095666296084 28.26375583701121 18.78618462938376 2 31.86704682789017 26.552062305138207 28.46071191617788 13.120178950793745 3 27.731788264396222 25.043654253841762 33.845766635714654 13.378790846047364 4 26.410656031286607 27.365874399358418 32.04635504665514 14.17711452269984 5 23.03604259016977 31.64589009627392 31.22718157712301 14.0908857364333 6 21.55585622280684 39.120094062351306 28.737641843747184 10.586407871094666 7 82.89721275500972 5.41737189850023 9.841549020469284 1.8438663260207648 8 84.56184532581152 4.2731650506836125 9.399161093690777 1.7658285298140868 9 80.06320465784373 6.060141227561341 11.104525224153889 2.77212889044104 10 52.825630948241134 20.32594183354568 16.18599206665381 10.662435151559379 11 48.03546549768828 19.564552075708576 21.159188913271564 11.24079351333158 12 43.000091590161574 20.536748132268105 24.827263189169425 11.635897088400887 13 21.21295159348265 40.03733602196377 24.760692779046554 13.989019605507025 14 14.663882722893593 41.76727312260646 28.864229871945042 14.704614282554903 15 14.108459133289003 22.21016740149776 50.793818632119546 12.887554833093684 16 15.897073508178702 16.775371033233824 49.136260098187634 18.191295360399838 17 16.244073632532828 17.36542017172783 31.613572917310467 34.77693327842888 18 22.180307519552265 22.619940295128817 35.67958038302559 19.52017180229333 19 31.148548072548344 23.307238824697173 26.52369169411269 19.02052140864179 20 32.67788038027044 21.924748629684597 26.094632742067958 19.30273824797701 21 22.52589283653241 28.58193856906382 29.066845180607608 19.82532341379616 22 22.655459406570216 25.64755361189153 26.800993939411992 24.895993042126264 23 20.05027778625835 30.312769232258503 27.160131621763906 22.476821359719242 24 20.288337742816314 22.48456556850311 40.82828780756237 16.398808881118203 25 17.62217047833148 24.403416685344606 37.74050794563267 20.23390489069124 26 16.25278586741468 34.002363472949995 29.11398060522481 20.630870054410515 27 18.21594279412542 33.04133694829028 30.91078597017437 17.831934287409926 28 15.20903034315036 28.430554180048382 40.40756877266949 15.95284670413176 29 15.813227555384124 24.38487526239092 39.45272272232767 20.349174459897284 30 17.977212665653468 30.190500089728573 32.916684972288394 18.915602272329572 31 27.898586607433394 26.674331447668138 27.12319770294853 18.303884241949934 32 30.671385669788425 26.219210254523844 27.461783446604798 15.647620629082928 33 28.50136901229319 27.121485041390564 25.994628199791652 18.382517746524602 34 19.05954030674513 27.666260343917333 30.36251088098566 22.911688468351876 35 20.79513663688373 25.946673676168462 32.07137479811071 21.186814888837098 36 29.315553424243397 26.528457361056606 26.692575016437825 17.46341419826217 37 20.09785999215154 33.507553209788384 29.449960124771117 16.94462667328896 38 20.66296384273597 33.75521896378019 24.37593963687107 21.205877556612773 39 21.503359422877732 32.39834422859117 27.061169569131582 19.03712677939951 40 23.967060305792 26.617664689163096 26.47625841531149 22.939016589733413 41 16.673207048123555 25.832744450790397 28.12108368287763 29.372964818208423 42 21.218089578156565 27.712278815344554 24.317411289716063 26.752220316782815 43 22.18976438989411 27.564245285899062 26.122482108271484 24.123508215935345 44 19.6341010276714 31.350195355112927 28.0813946128603 20.934309004355374 45 17.54956852098271 37.678926593091724 23.31647230440102 21.455032581524552 46 21.04607878689948 34.111973812660146 25.70079504728063 19.14115235315975 47 22.162659659150567 27.4084675476697 27.611157319878266 22.817715473301465 48 23.413349377745377 23.838610688944172 32.11605292570995 20.631987007600493 49 20.469582013777245 24.96263791579513 32.79694759032242 21.770832480105202 50 18.60032361857091 33.72312517545473 26.953495281617407 20.723055924356952 51 18.10097107910337 34.00340596259398 25.16689142246967 22.728731535832974 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 888.0 1 1884.0 2 2880.0 3 10216.5 4 17553.0 5 13148.5 6 8744.0 7 8954.5 8 9165.0 9 9713.5 10 10262.0 11 10232.5 12 10203.0 13 10126.0 14 10049.0 15 9837.5 16 9626.0 17 8775.0 18 7924.0 19 7485.0 20 7046.0 21 6744.5 22 6443.0 23 6604.0 24 6765.0 25 8021.5 26 9392.5 27 9507.0 28 13296.0 29 17085.0 30 19841.0 31 22597.0 32 24858.5 33 27120.0 34 29161.0 35 31202.0 36 33174.5 37 35147.0 38 46221.5 39 57296.0 40 74082.0 41 90868.0 42 109624.0 43 128380.0 44 129972.0 45 131564.0 46 125723.5 47 119883.0 48 107931.0 49 95979.0 50 91244.5 51 86510.0 52 80116.5 53 73723.0 54 70548.0 55 67373.0 56 63167.5 57 58962.0 58 56369.5 59 53777.0 60 49735.5 61 45694.0 62 37717.0 63 29740.0 64 24232.0 65 18724.0 66 14539.0 67 10354.0 68 8389.5 69 6425.0 70 5026.0 71 3627.0 72 2811.0 73 1995.0 74 1480.5 75 886.5 76 807.0 77 613.5 78 420.0 79 280.0 80 140.0 81 137.0 82 134.0 83 99.5 84 65.0 85 47.0 86 29.0 87 22.0 88 15.0 89 10.0 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1342939.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.533421512437947 #Duplication Level Percentage of deduplicated Percentage of total 1 82.28665572049911 15.250532753168736 2 5.683428188862903 2.1066674051973595 3 1.9778534707733961 1.0996917619104518 4 1.0391414533272676 0.7703538626224646 5 0.6616440259031742 0.613126381162497 6 0.45501689118872213 0.505981190380782 7 0.3789901690377344 0.4916789186292509 8 0.31334317614602175 0.464585692924825 9 0.26112447873583033 0.43555770284641054 >10 3.9038066656567345 17.777723594355198 >50 1.696624690857268 23.2359251426617 >100 1.3367223780090827 35.43270887044293 >500 0.0036313013589138977 0.3996898277519853 >1k 0.0012104337863046326 0.31698506638740237 >5k 8.069558575364217E-4 1.0987918295580303 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9374 0.6980212801921755 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5320 0.39614606471328934 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1813 0.13500240889571305 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.44635459987386E-5 0.0 0.0 0.0038721043919344067 0.0 2 1.489270919974772E-4 0.0 0.0 0.020849792879646806 0.0 3 1.489270919974772E-4 0.0 0.0 0.033731986337428584 0.0 4 1.489270919974772E-4 0.0 0.0 0.05748585751102619 0.0 5 1.489270919974772E-4 0.0 0.0 0.09568565660837909 0.0 6 1.489270919974772E-4 0.0 0.0 0.15287365993541033 0.0 7 1.489270919974772E-4 0.0 0.0 0.18533976599086036 0.0 8 1.489270919974772E-4 0.0 0.0 0.28623787081915114 0.0 9 1.489270919974772E-4 0.0 0.0 0.33314990479835643 0.0 10 1.489270919974772E-4 0.0 0.0 0.4038902734971581 0.0 11 1.489270919974772E-4 0.0 0.0 0.4601847142722045 0.0 12 1.489270919974772E-4 0.0 0.0 0.5147664934892798 0.0 13 1.489270919974772E-4 0.0 0.0 0.5364353853749128 0.0 14 1.489270919974772E-4 0.0 0.0 0.5459667192627513 0.0 15 1.489270919974772E-4 0.0 0.0 0.557434105346557 0.0 16 1.489270919974772E-4 0.0 0.0 0.5843154454521017 0.0 17 1.489270919974772E-4 0.0 0.0 0.614994426403582 0.0 18 1.489270919974772E-4 0.0 0.0 0.6626510958427747 0.0 19 1.489270919974772E-4 0.0 0.0 0.6840965970904114 0.0 20 1.489270919974772E-4 0.0 0.0 0.7105311559199636 0.0 21 1.489270919974772E-4 0.0 0.0 0.7394974753134729 0.0 22 1.489270919974772E-4 0.0 0.0 0.768240404068986 0.0 23 1.489270919974772E-4 0.0 0.0 0.8027170258664019 0.0 24 1.489270919974772E-4 0.0 0.0 0.8295239024259479 0.0 25 1.489270919974772E-4 0.0 0.0 0.8529799194155505 0.0 26 1.489270919974772E-4 0.0 0.0 0.8764359364051532 0.0 27 2.2339063799621577E-4 0.0 0.0 0.9001898075787508 0.0 28 2.2339063799621577E-4 0.0 0.0 0.9232735068383597 0.0 29 2.2339063799621577E-4 0.0 0.0 0.9513462636798842 0.0 30 2.2339063799621577E-4 0.0 0.0 0.9894715992312384 0.0 31 2.2339063799621577E-4 0.0 0.0 1.0246928564886417 0.0 32 2.2339063799621577E-4 0.0 0.0 1.0570100354520942 0.0 33 2.2339063799621577E-4 0.0 0.0 1.0926036104394914 0.0 34 2.978541839949544E-4 0.0 0.0 1.132292680456819 0.0 35 2.978541839949544E-4 0.0 0.0 1.1797259592580154 0.0 36 2.978541839949544E-4 0.0 0.0 1.2200107376433331 0.0 37 2.978541839949544E-4 0.0 0.0 1.2583594638326834 0.0 38 2.978541839949544E-4 0.0 0.0 1.2978996067580135 0.0 39 2.978541839949544E-4 0.0 0.0 1.3434712969092415 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAG 75 0.0 45.000004 1 TATAGTC 30 2.165776E-6 45.000004 26 ACGTAAA 30 2.165776E-6 45.000004 29 TTCGATC 30 2.165776E-6 45.000004 21 TATCGGA 30 2.165776E-6 45.000004 36 ATCGCAC 30 2.165776E-6 45.000004 22 CGGTTGA 35 1.2121382E-7 45.0 31 CGACACG 20 7.033712E-4 45.0 41 CCGTACC 20 7.033712E-4 45.0 15 ATTCACG 40 6.8157533E-9 45.0 1 TACTATC 20 7.033712E-4 45.0 40 CTCGAAT 20 7.033712E-4 45.0 35 GCTACGA 110 0.0 45.0 10 GATCTCG 35 1.2121382E-7 45.0 10 GTCCACT 20 7.033712E-4 45.0 45 CGGTAAT 20 7.033712E-4 45.0 6 TCGAATA 20 7.033712E-4 45.0 36 AATCGTC 20 7.033712E-4 45.0 20 GTTTCGA 25 3.891159E-5 44.999996 24 ATCCGTG 25 3.891159E-5 44.999996 1 >>END_MODULE