##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545455_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1665491 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.86649582615577 31.0 31.0 33.0 28.0 34.0 2 31.154514194312668 31.0 31.0 34.0 28.0 34.0 3 31.22911561815705 31.0 31.0 34.0 28.0 34.0 4 35.099967517086554 35.0 35.0 37.0 32.0 37.0 5 34.98112928860018 35.0 35.0 37.0 32.0 37.0 6 35.01812558578821 37.0 35.0 37.0 32.0 37.0 7 35.53973272746595 37.0 35.0 37.0 35.0 37.0 8 35.44994238936145 37.0 35.0 37.0 35.0 37.0 9 37.13110968477164 39.0 37.0 39.0 34.0 39.0 10 36.45450380698545 38.0 35.0 39.0 32.0 39.0 11 36.212246118411926 38.0 35.0 39.0 31.0 39.0 12 35.77012604691349 37.0 35.0 39.0 30.0 39.0 13 35.46610158806022 37.0 35.0 39.0 30.0 39.0 14 36.497237751509914 38.0 35.0 40.0 30.0 41.0 15 36.719743907352246 38.0 35.0 40.0 31.0 41.0 16 36.71431247602059 38.0 35.0 40.0 31.0 41.0 17 36.62048368919436 38.0 35.0 40.0 31.0 41.0 18 36.50693399123742 38.0 35.0 40.0 30.0 41.0 19 36.43820290833154 38.0 35.0 40.0 30.0 41.0 20 36.30044713540932 38.0 35.0 40.0 30.0 41.0 21 36.1582722452418 38.0 34.0 40.0 30.0 41.0 22 36.05493395040862 38.0 34.0 40.0 30.0 41.0 23 35.96006042662494 38.0 34.0 40.0 30.0 41.0 24 35.84046506405618 37.0 34.0 40.0 30.0 41.0 25 35.68529220512149 37.0 34.0 40.0 29.0 41.0 26 35.531126256461306 37.0 34.0 40.0 29.0 41.0 27 35.452182569584586 37.0 34.0 40.0 28.0 41.0 28 35.436013764109205 37.0 34.0 40.0 28.0 41.0 29 35.42377473069503 37.0 34.0 40.0 28.0 41.0 30 35.259999603720466 37.0 34.0 40.0 27.0 41.0 31 35.10600957915714 37.0 34.0 40.0 27.0 41.0 32 34.887371952175066 37.0 33.0 40.0 25.0 41.0 33 34.60810835963689 37.0 33.0 40.0 24.0 41.0 34 34.3671367782834 37.0 33.0 40.0 23.0 41.0 35 34.16305041576328 37.0 33.0 40.0 23.0 41.0 36 33.99949864634513 37.0 33.0 40.0 22.0 41.0 37 33.9474857564526 37.0 33.0 40.0 22.0 41.0 38 33.88151902351919 36.0 33.0 40.0 22.0 41.0 39 33.79039394388802 36.0 33.0 40.0 21.0 41.0 40 33.633067966143315 36.0 32.0 40.0 21.0 41.0 41 33.5336384285475 36.0 32.0 40.0 20.0 41.0 42 33.487515693570245 36.0 32.0 40.0 20.0 41.0 43 33.39256111260883 36.0 32.0 40.0 20.0 41.0 44 33.29724387583001 35.0 32.0 40.0 20.0 41.0 45 33.24312409973996 35.0 32.0 40.0 20.0 41.0 46 33.190163741503255 35.0 32.0 40.0 20.0 41.0 47 33.07625859281137 35.0 31.0 39.0 20.0 41.0 48 33.0062173857439 35.0 31.0 39.0 20.0 41.0 49 33.00890968489172 35.0 31.0 39.0 20.0 41.0 50 32.93564060087986 35.0 31.0 39.0 20.0 41.0 51 32.75311965060153 35.0 31.0 39.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 3.0 12 4.0 13 11.0 14 28.0 15 82.0 16 256.0 17 704.0 18 1506.0 19 2754.0 20 4846.0 21 7326.0 22 11007.0 23 15297.0 24 20859.0 25 28766.0 26 36553.0 27 41823.0 28 44445.0 29 48530.0 30 55782.0 31 66119.0 32 78851.0 33 98086.0 34 140284.0 35 170533.0 36 139161.0 37 167372.0 38 217278.0 39 267161.0 40 61.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.62822675115026 21.515697172785682 26.034364640817632 17.821711435246424 2 34.536782246196466 24.32916179072718 27.966107292083837 13.16794867099252 3 28.302284431437936 24.781340757770533 33.332512754497024 13.58386205629451 4 25.738596005622366 27.690933184268186 31.63841773987371 14.932053070235742 5 22.72434975631811 31.05996970262823 31.650486253002867 14.565194288050792 6 21.044124525440246 39.34389318225076 29.699710175557836 9.912272116751156 7 83.60657607876595 4.34502498062133 10.129925649553195 1.9184732910595133 8 84.03882098432234 3.82866073728408 10.162288478292588 1.970229800100991 9 79.18907997701578 5.3938448181347125 11.95197092028717 3.46510428456233 10 40.84723363860868 25.228956505919275 19.717548758894523 14.206261096577528 11 34.205408495152476 25.25609564987142 25.446910250490696 15.091585604485406 12 31.057628050827052 22.412669897345587 30.394700421677452 16.135001630149908 13 23.18793677059798 28.72258090857291 30.438891594130503 17.650590726698614 14 19.631448023435734 31.02982844098227 31.893957997971768 17.44476553761023 15 19.20983061451548 23.407991997555076 40.08733760794865 17.294839779980798 16 21.343675828929726 21.38306361307266 38.60218998481529 18.671070573182323 17 21.731609477325307 21.5090324715054 31.070176902787228 25.68918114838207 18 23.431528600274635 23.181272069317696 33.81459281377083 19.57260651663684 19 28.01342066693846 23.918832344335694 28.6380412743149 19.429705714410943 20 29.27292912420421 23.10447789870975 28.924803556428703 18.697789420657333 21 25.28359504794682 25.186926858205776 30.405688172436836 19.123789921410562 22 24.29619853844902 23.910906753624005 29.647053031208216 22.14584167671876 23 21.999818672091294 26.3879540627959 29.46026126829866 22.151965996814152 24 21.71623863473294 23.79898780599835 35.485271310382345 18.999502248886365 25 21.84136690021141 24.702024808299775 33.091863000160316 20.364745291328504 26 20.612660170484258 27.83107203821576 30.14318300128911 21.41308479001087 27 20.230550630414694 27.974213009857152 31.07570079934386 20.719535560384294 28 19.523611955873672 26.92959613711512 33.9626572584301 19.58413464858111 29 20.72367848280177 24.86419920612 33.4884427475141 20.92367956356414 30 21.1687724520877 26.91800796281697 32.5496805446562 19.363539040439125 31 25.491821931190263 25.808785517303907 29.00646115770064 19.69293139380519 32 27.056465630856007 25.351322823119425 28.657915293448 18.93429625257657 33 26.399902491217304 26.392757451106007 27.49585557652368 19.711484481153004 34 21.961931946795268 26.87874026338179 29.413488274628925 21.745839515194017 35 22.108555374961497 27.378833028818526 29.853358559127606 20.659253037092366 36 26.007405623927117 27.448662286376813 27.017918439667344 19.52601365002873 37 22.561815104374624 30.37392576723621 27.891774857984824 19.172484270404343 38 22.820657691935892 29.406343234517628 26.94706846209316 20.82593061145332 39 22.48363995962752 29.43870606325702 27.019899837345264 21.057754139770193 40 24.32345776710892 26.039107986773868 27.810597595543896 21.826836650573313 41 20.359641691249006 26.538720413379597 28.61354399393332 24.488093901438074 42 22.35280767053079 27.006750561846328 27.230468372389883 23.409973395232996 43 21.882555954970638 26.895612164821063 28.533387451508297 22.688444428700006 44 21.72266316659772 27.546951619672516 29.163231743671986 21.56715347005778 45 20.364024783081984 30.79398207495567 26.84349540165633 21.99849774030601 46 22.06838704021817 29.420393145324713 27.712428346955942 20.798791467501175 47 21.760189637770484 28.577518581607464 28.172713031772613 21.48957874884944 48 22.402822951309854 27.25550603395635 29.569298182938248 20.77237283179555 49 21.841246815503656 27.046258430697012 30.03774862788211 21.074746125917223 50 20.887594108884407 30.04255201619222 28.364968648884926 20.704885226038446 51 20.33058119197282 30.569183502042343 27.423924836579722 21.67631046940512 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1104.0 1 1890.5 2 2677.0 3 14336.0 4 25995.0 5 18776.0 6 11557.0 7 11648.5 8 11740.0 9 12073.0 10 12406.0 11 12457.5 12 12509.0 13 12385.0 14 12261.0 15 11825.0 16 11389.0 17 10842.0 18 10295.0 19 9932.0 20 9569.0 21 9477.5 22 9386.0 23 9539.0 24 9692.0 25 11066.0 26 14280.0 27 16120.0 28 18673.0 29 21226.0 30 23778.5 31 26331.0 32 31927.5 33 37524.0 34 42930.5 35 48337.0 36 52394.0 37 56451.0 38 60404.5 39 64358.0 40 76016.5 41 87675.0 42 99206.0 43 110737.0 44 113037.0 45 115337.0 46 117380.5 47 119424.0 48 115109.0 49 110794.0 50 110609.0 51 110424.0 52 107339.0 53 104254.0 54 98449.5 55 92645.0 56 90442.5 57 88240.0 58 83565.5 59 78891.0 60 74270.5 61 69650.0 62 61074.0 63 52498.0 64 44812.5 65 37127.0 66 30654.0 67 24181.0 68 19786.5 69 15392.0 70 12680.5 71 9969.0 72 8419.0 73 6869.0 74 5495.5 75 3060.0 76 1998.0 77 1469.0 78 940.0 79 725.0 80 510.0 81 396.0 82 282.0 83 197.0 84 112.0 85 66.5 86 21.0 87 19.0 88 17.0 89 11.5 90 6.0 91 4.0 92 2.0 93 2.0 94 2.0 95 3.5 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1665491.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.862757469107052 #Duplication Level Percentage of deduplicated Percentage of total 1 76.78983703267261 17.556274201702486 2 5.771185477323644 2.6389042775456653 3 2.544702664499128 1.7453675954830217 4 1.6457937008311374 1.505095289051457 5 1.1192991079632997 1.2795132020376396 6 0.9015009260867848 1.2366478218778538 7 0.7664877549131673 1.2266816550534076 8 0.6184898396613924 1.1312306561028256 9 0.5683922837023884 1.1695513436639633 >10 7.48999000112161 40.55961479036392 >50 1.6739651769762418 25.290447225584867 >100 0.1085035349013711 3.400904972249339 >500 0.0010585710555739002 0.17389031601368854 >1k 5.292855277869501E-4 0.22616631915767846 >5k 0.0 0.0 >10k+ 2.6464276389347505E-4 0.8597103341122132 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14209 0.8531418062301147 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2224 0.13353419502116795 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00840592954269942 0.0 2 0.0 0.0 0.0 0.030501515769223612 0.0 3 0.0 0.0 0.0 0.04773367133175742 0.0 4 0.0 0.0 0.0 0.0673675210493482 0.0 5 0.0 0.0 0.0 0.11119843937913805 0.0 6 0.0 0.0 0.0 0.19825985249995345 0.0 7 0.0 0.0 0.0 0.25283835217362327 0.0 8 0.0 0.0 0.0 0.39243682493631005 0.0 9 0.0 0.0 0.0 0.465568411957795 0.0 10 0.0 0.0 0.0 0.5762865125059217 0.0 11 0.0 0.0 0.0 0.6565030972848247 0.0 12 0.0 0.0 0.0 0.7208084582864753 0.0 13 0.0 0.0 0.0 0.7571340823817121 0.0 14 0.0 0.0 0.0 0.7765878050376736 0.0 15 0.0 0.0 0.0 0.7953810618009944 0.0 16 0.0 0.0 0.0 0.8316466435423547 0.0 17 0.0 0.0 0.0 0.873255994778717 0.0 18 0.0 0.0 0.0 0.9313769933310958 0.0 19 0.0 0.0 0.0 0.9597770267146445 0.0 20 6.004235387642443E-5 0.0 0.0 0.9918996860385316 0.0 21 6.004235387642443E-5 0.0 0.0 1.0302067078116903 0.0 22 6.004235387642443E-5 0.0 0.0 1.073437202602716 0.0 23 6.004235387642443E-5 0.0 0.0 1.1224317633658782 0.0 24 6.004235387642443E-5 0.0 0.0 1.1606187004312842 0.0 25 6.004235387642443E-5 0.0 0.0 1.194242418602082 0.0 26 1.2008470775284887E-4 0.0 0.0 1.2276860097112503 0.0 27 1.2008470775284887E-4 0.0 0.0 1.2646720996991279 0.0 28 1.2008470775284887E-4 0.0 0.0 1.3055609426889727 0.0 29 1.2008470775284887E-4 0.0 0.0 1.3529343598974717 0.0 30 1.2008470775284887E-4 0.0 0.0 1.4144777726208067 0.0 31 1.8012706162927328E-4 0.0 0.0 1.465153519292509 0.0 32 1.8012706162927328E-4 0.0 0.0 1.515228842425447 0.0 33 1.8012706162927328E-4 0.0 0.0 1.5636830220037214 0.0 34 1.8012706162927328E-4 0.0 0.0 1.6189820299239084 0.0 35 1.8012706162927328E-4 0.0 0.0 1.6831072638639297 0.0 36 1.8012706162927328E-4 0.0 0.0 1.7439301683407475 0.0 37 2.4016941550569773E-4 0.0 0.0 1.804272733986554 0.0 38 3.0021176938212213E-4 0.0 0.0 1.8750626692068586 0.0 39 3.0021176938212213E-4 0.0 0.0 1.984339753261951 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCC 75 0.0 42.0 12 CGTTTTT 10945 0.0 41.751938 1 TCGACGG 70 0.0 38.57143 2 GCCCTAC 1185 0.0 38.16456 26 GGGCGAT 3835 0.0 37.842247 7 CGAGGGC 400 0.0 37.6875 4 ACGCATT 30 1.1401421E-4 37.499996 13 TATACTA 1175 0.0 37.148937 44 AGGGCGA 1945 0.0 36.902313 6 GGCGATT 1075 0.0 36.627907 8 AAGGGCG 870 0.0 36.206898 5 TTTACGG 175 0.0 36.0 2 TAACGCG 50 4.881258E-8 36.0 1 TCGGTAA 25 0.00210738 36.0 15 TCGTCCC 470 0.0 35.904255 38 TATGGGC 640 0.0 35.859375 4 TGGGCGA 1135 0.0 35.68282 6 ACCCACC 385 0.0 35.649353 13 GCGTAAG 120 0.0 35.625 1 TACGGGA 405 0.0 35.555553 4 >>END_MODULE