##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545453_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1214960 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.939049845262396 31.0 31.0 33.0 28.0 34.0 2 31.219516691907554 31.0 31.0 34.0 28.0 34.0 3 31.322255053664318 31.0 31.0 34.0 28.0 34.0 4 35.15594258247185 35.0 35.0 37.0 32.0 37.0 5 35.032661157568974 37.0 35.0 37.0 32.0 37.0 6 35.08656745901099 37.0 35.0 37.0 32.0 37.0 7 35.56991176664253 37.0 35.0 37.0 35.0 37.0 8 35.49135362481069 37.0 35.0 37.0 35.0 37.0 9 37.18988361756766 39.0 37.0 39.0 34.0 39.0 10 36.569647560413514 39.0 35.0 39.0 32.0 39.0 11 36.27012411931257 38.0 35.0 39.0 32.0 39.0 12 35.44288042404688 37.0 35.0 39.0 30.0 39.0 13 34.983562421808124 37.0 34.0 39.0 29.0 39.0 14 35.947971949693816 38.0 34.0 40.0 29.0 41.0 15 36.285003621518406 38.0 35.0 40.0 30.0 41.0 16 36.40499193389083 38.0 35.0 40.0 31.0 41.0 17 36.34642539672088 38.0 35.0 40.0 31.0 41.0 18 36.30764634226641 38.0 35.0 40.0 31.0 41.0 19 36.20943158622506 37.0 35.0 40.0 31.0 41.0 20 36.043760288404556 37.0 34.0 40.0 30.0 41.0 21 35.88489415289392 37.0 34.0 40.0 30.0 41.0 22 35.78007753341674 37.0 34.0 40.0 30.0 41.0 23 35.70715990649898 36.0 34.0 40.0 30.0 41.0 24 35.590846612234145 36.0 34.0 40.0 30.0 41.0 25 35.468634358332785 36.0 34.0 40.0 29.0 41.0 26 35.329717027721074 36.0 34.0 40.0 29.0 41.0 27 35.2260485941924 36.0 34.0 40.0 29.0 41.0 28 35.26798742345427 36.0 34.0 40.0 29.0 41.0 29 35.3384350102061 36.0 34.0 40.0 29.0 41.0 30 35.23344883782182 36.0 34.0 40.0 29.0 41.0 31 35.069695298610654 36.0 34.0 40.0 28.0 41.0 32 34.85367007967341 36.0 34.0 40.0 27.0 41.0 33 34.60321738987292 36.0 33.0 40.0 25.0 41.0 34 34.4384975637058 36.0 33.0 40.0 24.0 41.0 35 34.26099542371765 36.0 33.0 40.0 24.0 41.0 36 34.052663462171594 35.0 33.0 40.0 23.0 41.0 37 33.99641716599724 35.0 33.0 40.0 23.0 41.0 38 34.01588447356291 35.0 33.0 40.0 23.0 41.0 39 33.96891091064727 35.0 33.0 40.0 23.0 41.0 40 33.80873526700468 35.0 33.0 40.0 23.0 41.0 41 33.7827023111872 35.0 33.0 40.0 23.0 41.0 42 33.70806363995523 35.0 33.0 40.0 23.0 41.0 43 33.6195619608876 35.0 33.0 40.0 23.0 41.0 44 33.53724978600118 35.0 32.0 40.0 23.0 41.0 45 33.505802660169884 35.0 32.0 40.0 23.0 41.0 46 33.421148021334034 35.0 32.0 39.0 23.0 41.0 47 33.357568150391785 35.0 32.0 39.0 23.0 41.0 48 33.344636037400406 35.0 32.0 39.0 23.0 41.0 49 33.373976097978534 35.0 32.0 39.0 23.0 41.0 50 33.28866300125107 35.0 32.0 39.0 22.0 41.0 51 33.112640745374335 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 10.0 14 23.0 15 61.0 16 153.0 17 416.0 18 863.0 19 1701.0 20 3093.0 21 4691.0 22 7106.0 23 9804.0 24 13713.0 25 18765.0 26 24532.0 27 28785.0 28 30745.0 29 34335.0 30 40127.0 31 48645.0 32 60204.0 33 76496.0 34 123227.0 35 163934.0 36 88741.0 37 102480.0 38 138934.0 39 193268.0 40 102.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.58617567656548 24.19758675182722 27.175544873905316 16.04069269770198 2 31.37272008955027 26.197981826562188 29.56829854480806 12.860999539079476 3 28.658885889247383 25.444129847896228 32.08377230526108 13.813211957595312 4 26.3588924738263 28.034750115230132 30.750230460262067 14.856126950681503 5 22.690705866859815 32.80264370843485 30.166672153815767 14.339978270889578 6 20.664877856061107 40.34774807401067 28.601023902021467 10.386350167906762 7 84.52607493250807 5.326018963587279 8.253028906301441 1.8948771976032133 8 86.03484888391387 4.331665240007902 7.8121090406268525 1.8213768354513729 9 81.29839665503391 5.906284980575492 9.768716665569237 3.0266016988213607 10 48.76720221241852 24.42607164021861 15.745456640547836 11.061269506815039 11 43.5101567129782 21.151313623493778 21.97562059656285 13.362909066965168 12 40.17835978139198 21.85265358530322 25.3804240468822 12.588562586422597 13 21.829607559096594 39.7396622111016 23.909182195298612 14.521548034503192 14 15.722904457759926 40.80233094093633 27.70371041021927 15.77105419108448 15 14.45380917890301 23.68398959636531 46.81734378086521 15.044857443866464 16 15.202228879963126 19.150424705340093 45.52923553038783 20.118110884308948 17 16.286873641930598 19.490929742542964 31.068265621913476 33.15393099361296 18 20.87739514058076 23.1516263909923 35.29647066570093 20.674507802726016 19 29.34969052479094 24.0232600250214 26.11295845130704 20.514090998880622 20 30.23720945545532 22.68387436623428 27.26476591821953 19.81415026009087 21 21.875781918746295 28.147511029169685 29.01305392770132 20.963653124382695 22 22.73367024428788 26.006699809047213 25.546026206624084 25.713603740040824 23 19.806001843682097 29.929709620069794 26.675199183512216 23.589089352735893 24 18.879469282939358 23.396325804964775 40.66619477184434 17.058010140251533 25 17.134144333969843 26.373625469151246 35.873444393231054 20.618785803647857 26 16.912984789622705 34.00441166787384 28.35829986172384 20.724303680779617 27 17.814084414301707 34.362365839204585 29.122851781128595 18.700697965365116 28 15.231283334430762 28.885724632909728 37.939191413709096 17.943800618950416 29 16.155182063607032 24.223184302363865 37.34509778099691 22.276535853032197 30 17.63366695199842 32.35143543820373 31.949035359188784 18.065862250609076 31 27.312339500888918 27.626094686244812 26.66063080266017 18.400935010206098 32 28.878234674392573 26.598818068084544 27.24377757292421 17.27916968459867 33 27.265671297820504 28.291219464015278 24.791515770066503 19.651593468097715 34 18.422664120629488 27.79795219595707 29.72418845064858 24.055195232764863 35 20.479439652334232 26.36226707052084 31.254197669059064 21.904095608085864 36 28.31352472509383 27.980180417462304 24.957941002172912 18.748353855270956 37 19.200220583393694 35.35927108711398 28.15170869822875 17.28879963126358 38 19.834973990913284 33.409001119378416 25.724879831434777 21.031145058273523 39 19.848472377691447 33.57246329097254 26.99660894185817 19.582455389477843 40 23.139115691051558 28.037137025087244 26.214937117271354 22.608810166589848 41 17.307154144992428 25.556067689471256 28.52414894317508 28.612629222361228 42 20.28758148416409 27.050767103443736 25.300092184104827 27.36155922828735 43 20.799697109369855 27.51316915783236 26.42432672680582 25.262807005991966 44 19.205488246526635 30.522157108052937 28.77074142358596 21.501613221834464 45 17.167890300915257 37.5847764535458 23.238789754395206 22.008543491143744 46 19.49298742345427 35.39474550602489 25.83928689010338 19.272980180417463 47 21.00883979719497 28.6557582142622 27.620003950747353 22.715398037795484 48 20.900441166787385 25.132679265160995 32.08788766708369 21.878991900967932 49 20.112925528412458 26.622934088365046 32.62477777046158 20.639362612760912 50 18.830825706196087 34.34327056034767 27.948162902482387 18.87774083097386 51 18.00446105221571 33.017218673865806 25.828833871073947 23.149486402844538 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 635.0 1 1329.5 2 2024.0 3 7400.0 4 12776.0 5 9742.5 6 6709.0 7 6922.0 8 7135.0 9 7387.0 10 7639.0 11 7831.5 12 8024.0 13 7796.0 14 7568.0 15 7097.0 16 6626.0 17 6125.0 18 5624.0 19 5364.5 20 5105.0 21 5680.5 22 6256.0 23 5783.0 24 5310.0 25 6887.5 26 10051.5 27 11638.0 28 14452.0 29 17266.0 30 20125.5 31 22985.0 32 24606.0 33 26227.0 34 32504.5 35 38782.0 36 39652.0 37 40522.0 38 47541.5 39 54561.0 40 69433.5 41 84306.0 42 100594.0 43 116882.0 44 116724.0 45 116566.0 46 112050.0 47 107534.0 48 98958.0 49 90382.0 50 85332.5 51 80283.0 52 76246.5 53 72210.0 54 63485.5 55 54761.0 56 51915.5 57 49070.0 58 46465.0 59 43860.0 60 39042.5 61 34225.0 62 29903.0 63 25581.0 64 20449.0 65 15317.0 66 12240.0 67 9163.0 68 7377.5 69 5592.0 70 4326.5 71 3061.0 72 2408.0 73 1755.0 74 1431.0 75 875.5 76 644.0 77 513.5 78 383.0 79 293.5 80 204.0 81 160.5 82 117.0 83 87.0 84 57.0 85 38.5 86 20.0 87 10.5 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1214960.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.44330734081381 #Duplication Level Percentage of deduplicated Percentage of total 1 80.91135450491069 14.92272978495608 2 5.719516836417647 2.1097361371001955 3 2.0067611139147776 1.1103393595057236 4 1.091562783830412 0.805281116159144 5 0.7705661839115806 0.710589447815967 6 0.52522134920775 0.5812091259237258 7 0.4250960336230011 0.5488123758228951 8 0.37559665562300015 0.5541795644669436 9 0.2985903860008675 0.49562948322236067 >10 4.685762794522685 21.010154363387517 >50 2.068843624120665 27.7940311907689 >100 1.1175429929611835 27.83832789160754 >500 8.961852389424087E-4 0.10503937880431405 >1k 0.002240463097356022 0.8567610071316474 >5k 4.4809261947120435E-4 0.5571797733270537 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6742 0.5549153881609271 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4769 0.3925232106406796 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1785 0.14691841706722855 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1678 0.13811154276684004 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010946862448146442 0.0 2 0.0 0.0 0.0 0.040248238625139925 0.0 3 0.0 0.0 0.0 0.05432277605847106 0.0 4 0.0 0.0 0.0 0.08197800750641997 0.0 5 0.0 0.0 0.0 0.13128004214130506 0.0 6 0.0 0.0 0.0 0.1972081385395404 0.0 7 0.0 0.0 0.0 0.23679791927306248 0.0 8 0.0 0.0 0.0 0.359600316059788 0.0 9 0.0 0.0 0.0 0.4156515440837558 0.0 10 0.0 0.0 0.0 0.501991835122144 0.0 11 0.0 0.0 0.0 0.5703891486139462 0.0 12 0.0 0.0 0.0 0.640103377888984 0.0 13 0.0 0.0 0.0 0.6675939948640285 0.0 14 0.0 0.0 0.0 0.6781293211299138 0.0 15 0.0 0.0 0.0 0.6930269309277671 0.0 16 0.0 0.0 0.0 0.7283367353657734 0.0 17 0.0 0.0 0.0 0.7701488114835057 0.0 18 0.0 0.0 0.0 0.8396984262856391 0.0 19 0.0 0.0 0.0 0.8639790610390465 0.0 20 0.0 0.0 0.0 0.8973134918021992 0.0 21 0.0 0.0 0.0 0.9304833080924475 0.0 22 0.0 0.0 0.0 0.9709784684269441 0.0 23 0.0 0.0 0.0 1.0192105089879502 0.0 24 0.0 0.0 0.0 1.05797721735695 0.0 25 0.0 0.0 0.0 1.089253967208797 0.0 26 8.230723645222887E-5 0.0 0.0 1.1216830183709752 0.0 27 8.230723645222887E-5 0.0 0.0 1.1523836175676565 0.0 28 8.230723645222887E-5 0.0 0.0 1.1818496082175545 0.0 29 8.230723645222887E-5 0.0 0.0 1.2195463225126753 0.0 30 8.230723645222887E-5 0.0 0.0 1.276996773556331 0.0 31 1.6461447290445775E-4 0.0 0.0 1.324817277935076 0.0 32 1.6461447290445775E-4 0.0 0.0 1.3732139329689865 0.0 33 1.6461447290445775E-4 0.0 0.0 1.4184829130177126 0.0 34 1.6461447290445775E-4 0.0 0.0 1.469760321327451 0.0 35 1.6461447290445775E-4 0.0 0.0 1.531573055903075 0.0 36 1.6461447290445775E-4 0.0 0.0 1.5782412589714887 0.0 37 2.4692170935668666E-4 0.0 0.0 1.6270494501876605 0.0 38 2.4692170935668666E-4 0.0 0.0 1.6793968525712781 0.0 39 2.4692170935668666E-4 0.0 0.0 1.7313327187726344 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACCG 20 7.0334465E-4 45.0 19 GACACGT 35 1.2120108E-7 45.0 39 CAATTCG 50 2.1827873E-11 45.0 1 ATAGACG 35 1.2120108E-7 45.0 1 ACGGGTA 110 0.0 45.0 5 GTTACTA 35 1.2120108E-7 45.0 9 ACGATAT 20 7.0334465E-4 45.0 12 CCCGTAA 20 7.0334465E-4 45.0 21 CCGTAAA 20 7.0334465E-4 45.0 22 TCGCTAC 20 7.0334465E-4 45.0 41 TCTCGAG 25 3.8909384E-5 45.0 1 ACTACGT 25 3.8909384E-5 45.0 19 ACTACGG 45 3.8562575E-10 45.0 2 CAATCGA 25 3.8909384E-5 45.0 42 TATCGGA 25 3.8909384E-5 45.0 13 AATACGG 110 0.0 45.0 2 TACGTCC 20 7.0334465E-4 45.0 29 ATCGACG 35 1.2120108E-7 45.0 29 TGCGTAA 20 7.0334465E-4 45.0 34 ACTCTCG 30 2.165605E-6 44.999996 9 >>END_MODULE