##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545450_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2062602 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.909141463064614 31.0 31.0 33.0 28.0 34.0 2 31.20966187369158 31.0 31.0 34.0 30.0 34.0 3 31.29771473119875 31.0 31.0 34.0 28.0 34.0 4 35.16086622625208 35.0 35.0 37.0 32.0 37.0 5 35.057367344742225 37.0 35.0 37.0 32.0 37.0 6 35.115742154812224 37.0 35.0 37.0 32.0 37.0 7 35.596957629246944 37.0 35.0 37.0 35.0 37.0 8 35.52015706374763 37.0 35.0 37.0 35.0 37.0 9 37.24123606977982 39.0 37.0 39.0 34.0 39.0 10 36.36464330006468 38.0 35.0 39.0 32.0 39.0 11 36.277225562663084 38.0 35.0 39.0 32.0 39.0 12 35.94001751186123 37.0 35.0 39.0 31.0 39.0 13 35.69080898787066 37.0 35.0 39.0 30.0 39.0 14 36.74990133821261 38.0 35.0 40.0 31.0 41.0 15 36.95649136382104 39.0 35.0 41.0 31.0 41.0 16 36.912983212466585 38.0 35.0 41.0 31.0 41.0 17 36.83524645084219 38.0 35.0 40.0 31.0 41.0 18 36.73384298085622 38.0 35.0 40.0 31.0 41.0 19 36.64047111367098 38.0 35.0 40.0 31.0 41.0 20 36.50305390957635 38.0 35.0 40.0 31.0 41.0 21 36.37374006230964 38.0 35.0 40.0 30.0 41.0 22 36.28426763864284 38.0 35.0 40.0 30.0 41.0 23 36.18027278166122 38.0 34.0 40.0 30.0 41.0 24 36.05240274177956 38.0 34.0 40.0 30.0 41.0 25 35.92819167246032 38.0 34.0 40.0 30.0 41.0 26 35.81903440411674 38.0 34.0 40.0 30.0 41.0 27 35.73155315470459 38.0 34.0 40.0 29.0 41.0 28 35.747177109301745 38.0 34.0 40.0 29.0 41.0 29 35.73654296854168 38.0 34.0 40.0 29.0 41.0 30 35.584905861625266 37.0 34.0 40.0 29.0 41.0 31 35.42560513370975 38.0 34.0 40.0 28.0 41.0 32 35.181130436216 38.0 34.0 40.0 26.0 41.0 33 34.895267724941604 38.0 34.0 40.0 25.0 41.0 34 34.65863118526987 37.0 33.0 40.0 24.0 41.0 35 34.42435137753188 37.0 33.0 40.0 23.0 41.0 36 34.2619181984697 37.0 33.0 40.0 23.0 41.0 37 34.22596555224905 37.0 33.0 40.0 23.0 41.0 38 34.15078187648417 37.0 33.0 40.0 23.0 41.0 39 34.07394931256733 37.0 33.0 40.0 22.0 41.0 40 33.931599503927565 37.0 33.0 40.0 21.0 41.0 41 33.841426024022084 37.0 33.0 40.0 21.0 41.0 42 33.78588743732431 37.0 33.0 40.0 21.0 41.0 43 33.70218781907513 36.0 33.0 40.0 21.0 41.0 44 33.614929104112186 36.0 33.0 40.0 20.0 41.0 45 33.55008237168392 36.0 32.0 40.0 20.0 41.0 46 33.498440804382035 36.0 32.0 40.0 20.0 41.0 47 33.39842441731366 36.0 32.0 40.0 20.0 41.0 48 33.33060861959797 36.0 32.0 40.0 20.0 41.0 49 33.32612108395124 36.0 32.0 40.0 20.0 41.0 50 33.26451928195551 35.0 32.0 40.0 20.0 41.0 51 33.07868410871317 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 3.0 13 11.0 14 22.0 15 67.0 16 256.0 17 750.0 18 1582.0 19 3028.0 20 5195.0 21 8050.0 22 12130.0 23 16843.0 24 23913.0 25 33665.0 26 43964.0 27 49757.0 28 52194.0 29 55965.0 30 64530.0 31 76364.0 32 93826.0 33 114880.0 34 166030.0 35 207916.0 36 172361.0 37 209758.0 38 286108.0 39 363355.0 40 77.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.0759894540973 22.69022331986491 26.904075531779764 18.32971169425803 2 33.96816254420387 24.14998143122134 28.940629360390417 12.941226664184367 3 28.388996035105173 24.602565109507314 34.24858503967319 12.759853815714326 4 24.589280917986116 27.422546860712828 33.55824342262831 14.429928798672744 5 22.05607286330567 30.763569510744198 32.97616311823609 14.204194507714044 6 20.14504009983506 39.53026323061841 30.17310174236232 10.151594927184208 7 84.63101461164102 3.6291053727282336 10.318520005313676 1.4213600103170656 8 85.57952527923469 3.033692394364012 9.955241001414718 1.4315413249865947 9 80.94135465785449 4.078440726810117 12.129436507867247 2.8507681074681397 10 36.30773169036004 22.87222644019544 27.144451522882264 13.675590346562256 11 33.87216729160546 24.541622668842557 25.483442758224804 16.10276728132718 12 29.517861419701912 23.817488783585006 29.55247788957831 17.112171907134773 13 22.528388899070205 29.20791311169096 29.78296346071612 18.48073452852271 14 19.744720503519343 31.081275010884312 31.52498640067255 17.6490180849238 15 20.872034449690247 23.21892444591831 38.43446287747224 17.474578226919203 16 20.789420353514636 21.774923131074246 38.065753839082866 19.36990267632825 17 21.082690698447884 21.866457998198392 32.12059330884 24.930257994513727 18 23.386819173063927 22.586616322489746 34.67043084414734 19.356133660298983 19 26.717660508425766 23.839693746054742 30.06639186813549 19.376253877384002 20 28.351131241024685 23.772060727178584 29.63358902977889 18.24321900201784 21 24.400490254542564 26.052723695603902 31.311809064472936 18.2349769853806 22 23.61284435872747 23.01151652136476 30.733025566735613 22.642613553172158 23 21.588556590171056 27.409941423502936 30.146436394418313 20.8550655919077 24 20.59427848901533 24.395981386617485 36.81990030068816 18.189839823679023 25 21.003858233435242 25.584286255903947 34.02886257261459 19.382992938046215 26 20.802122755626147 28.815641602209247 29.812731685511796 20.56950395665281 27 19.393368182518973 28.469089043838803 31.907270525287963 20.230272248354265 28 18.50114564031258 27.283790086502393 35.33430104305145 18.88076323013359 29 19.745156845576606 24.998084943193113 34.7793224286605 20.477435782569785 30 20.284427145905997 27.14963914511864 33.940818441948565 18.625115267026796 31 24.627097229615796 26.16142135031383 30.799107147185932 18.412374272884442 32 25.18411210694065 25.72168552149179 30.414932206989036 18.679270164578526 33 24.310749238098285 26.85084180079337 28.72425218243752 20.114156778670825 34 20.609308048765588 27.52896584023481 30.541956228104112 21.31976988289549 35 21.285589755076355 27.084963555741727 30.95342678810551 20.676019901076405 36 24.98421896226223 28.507050802820906 27.39001513622114 19.118715098695723 37 21.25160355706045 30.253388680899175 29.04632110315029 19.448686658890082 38 22.017674762266303 30.21033626458231 27.574587826444464 20.197401146706927 39 21.50860902878985 30.26720617937925 27.811570045990454 20.41261474584045 40 23.777054419611733 27.043995884809576 28.416534067163706 20.76241562841498 41 20.571879596742367 26.305850571268717 28.709755929646146 24.41251390234277 42 21.932733508451946 27.250385677896173 27.57032137077342 23.24655944287846 43 21.683776123556555 27.291256383926708 28.383856895319603 22.641110597197134 44 21.13000957043579 27.90295946576218 29.834694235727493 21.132336728074538 45 20.07498295841854 31.623987565221018 27.059849646223554 21.241179830136886 46 21.69570280645515 29.864995767482043 28.037692196555614 20.401609229507194 47 21.380760806011047 28.771619536876237 28.694241545387815 21.153378111724898 48 21.85365863118527 27.931127769681208 29.95643366970458 20.258779929428943 49 21.507057590364013 27.129034103525544 30.63562432306378 20.728283983046655 50 20.524512242303654 30.492504128280686 29.000990011645484 19.981993617770176 51 20.28399080384873 30.44431257217825 28.061594044803602 21.21010257916942 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1406.0 1 2264.0 2 3122.0 3 18596.0 4 34070.0 5 25077.5 6 16085.0 7 16177.5 8 16270.0 9 16551.5 10 16833.0 11 16578.5 12 16324.0 13 15919.0 14 15514.0 15 14677.0 16 13840.0 17 13078.5 18 12317.0 19 11934.0 20 11551.0 21 11293.5 22 11036.0 23 11492.0 24 11948.0 25 13113.0 26 16903.0 27 19528.0 28 23534.0 29 27540.0 30 30712.5 31 33885.0 32 39759.5 33 45634.0 34 55233.0 35 64832.0 36 70440.5 37 76049.0 38 81905.0 39 87761.0 40 104617.0 41 121473.0 42 134043.5 43 146614.0 44 150166.0 45 153718.0 46 155554.0 47 157390.0 48 151657.0 49 145924.0 50 144036.0 51 142148.0 52 138974.0 53 135800.0 54 128332.5 55 120865.0 56 110184.0 57 99503.0 58 90330.5 59 81158.0 60 74414.5 61 67671.0 62 58793.0 63 49915.0 64 41888.0 65 33861.0 66 27703.0 67 21545.0 68 17294.0 69 13043.0 70 10787.5 71 8532.0 72 7267.5 73 6003.0 74 4854.0 75 2840.5 76 1976.0 77 1460.0 78 944.0 79 747.5 80 551.0 81 418.0 82 285.0 83 184.5 84 84.0 85 60.5 86 37.0 87 29.5 88 22.0 89 12.5 90 3.0 91 4.5 92 6.0 93 3.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2062602.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.69153085785006 #Duplication Level Percentage of deduplicated Percentage of total 1 76.67453537566283 15.86513514736844 2 5.856551679203332 2.423620395816587 3 2.512276583281569 1.5594854533927414 4 1.5490080000411754 1.2820538732763438 5 1.1024942039560848 1.1406146420879086 6 0.9060389724338149 1.1248400013917426 7 0.7316909844949043 1.0597864608860903 8 0.6024013478525017 0.9971684862320406 9 0.5432410700539754 1.011644042784599 >10 7.185207199946351 35.617048077423085 >50 2.0619973402375527 29.34663003422794 >100 0.2726686296799669 7.275453173236627 >500 9.443065780166463E-4 0.1317427100983028 >1k 7.082299335124848E-4 0.2797029136161965 >5k 0.0 0.0 >10k+ 2.3607664450416157E-4 0.8850745881613454 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18119 0.8784535261771297 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2669 0.12939966120463375 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0063996835065611305 0.0 2 0.0 0.0 0.0 0.022059515117312987 0.0 3 0.0 0.0 0.0 0.031852970180383806 0.0 4 0.0 0.0 0.0 0.04528260905400072 0.0 5 0.0 0.0 0.0 0.07602048286581706 0.0 6 0.0 0.0 0.0 0.1316298539417687 0.0 7 0.0 0.0 0.0 0.16469488539233454 0.0 8 0.0 0.0 0.0 0.24449699942111955 0.0 9 0.0 0.0 0.0 0.28769486309040715 0.0 10 0.0 0.0 0.0 0.3492675756156544 0.0 11 0.0 0.0 0.0 0.40410122747868954 0.0 12 0.0 0.0 0.0 0.4461839947794097 0.0 13 0.0 0.0 0.0 0.4676617204870353 0.0 14 0.0 0.0 0.0 0.47895813152513184 0.0 15 0.0 0.0 0.0 0.4922423230463269 0.0 16 0.0 0.0 0.0 0.5177925746217642 0.0 17 0.0 0.0 0.0 0.5455730189343363 0.0 18 0.0 0.0 0.0 0.5875103388826346 0.0 19 0.0 0.0 0.0 0.6070002841071618 0.0 20 0.0 0.0 0.0 0.6284780098147873 0.0 21 0.0 0.0 0.0 0.6544646034474901 0.0 22 0.0 0.0 0.0 0.684087380890739 0.0 23 0.0 0.0 0.0 0.7225824468317203 0.0 24 0.0 0.0 0.0 0.7540475574056459 0.0 25 0.0 0.0 0.0 0.7798887036859268 0.0 26 0.0 0.0 0.0 0.8062631569250879 0.0 27 0.0 0.0 0.0 0.8386009516135444 0.0 28 4.848245080728129E-5 0.0 0.0 0.8680297992535642 0.0 29 4.848245080728129E-5 0.0 0.0 0.9033735058920722 0.0 30 4.848245080728129E-5 0.0 0.0 0.9502560358227132 0.0 31 4.848245080728129E-5 0.0 0.0 0.9864724265757524 0.0 32 4.848245080728129E-5 0.0 0.0 1.0270522379014468 0.0 33 4.848245080728129E-5 0.0 0.0 1.0662745406045373 0.0 34 4.848245080728129E-5 0.0 0.0 1.1087451675117157 0.0 35 4.848245080728129E-5 0.0 0.0 1.1588760216464447 0.0 36 4.848245080728129E-5 0.0 0.0 1.2020738853157322 0.0 37 4.848245080728129E-5 0.0 0.0 1.249247309951217 0.0 38 4.848245080728129E-5 0.0 0.0 1.3031113127981064 0.0 39 4.848245080728129E-5 0.0 0.0 1.38044082183572 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15290 0.0 42.880966 1 CGGTCTA 130 0.0 41.538464 31 TATAGCG 125 0.0 41.4 1 CGTTCGA 110 0.0 40.909092 14 TCGTTAG 80 0.0 39.375004 1 TACGGGA 475 0.0 38.84211 4 TACGGGT 600 0.0 38.625 4 TAGGGCG 820 0.0 37.865852 5 CTAAGCG 90 0.0 37.5 1 CCCGCTA 30 1.14023656E-4 37.499996 29 AGGGCGA 2170 0.0 37.430874 6 TAGGGTA 1680 0.0 37.366074 5 AGGGTGC 1345 0.0 37.137547 6 GGGCGAT 4550 0.0 36.890106 7 GCGCGAC 500 0.0 36.45 9 GTTTTTT 19030 0.0 36.357067 2 CGTAAGG 155 0.0 36.29032 2 TAAGGGT 1690 0.0 36.213017 4 CGAGGGA 995 0.0 36.180904 4 TTACGGG 585 0.0 36.153843 3 >>END_MODULE