##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545448_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1071964 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.938770331839503 31.0 31.0 33.0 28.0 34.0 2 31.23465340253964 31.0 31.0 34.0 30.0 34.0 3 31.25423428398715 31.0 31.0 34.0 28.0 34.0 4 35.136722875021924 35.0 35.0 37.0 32.0 37.0 5 35.039431361500945 35.0 35.0 37.0 32.0 37.0 6 35.09308428268113 37.0 35.0 37.0 32.0 37.0 7 35.576724591497474 37.0 35.0 37.0 35.0 37.0 8 35.48523271303887 37.0 35.0 37.0 35.0 37.0 9 37.15616569213145 39.0 37.0 39.0 34.0 39.0 10 36.56541637592307 39.0 35.0 39.0 32.0 39.0 11 36.32327951311798 38.0 35.0 39.0 32.0 39.0 12 35.936922322018276 37.0 35.0 39.0 31.0 39.0 13 35.65498748092287 37.0 35.0 39.0 30.0 39.0 14 36.70198812646694 38.0 35.0 41.0 31.0 41.0 15 36.910278703389295 39.0 35.0 41.0 31.0 41.0 16 36.90010578713464 38.0 35.0 41.0 31.0 41.0 17 36.786474172640126 38.0 35.0 40.0 31.0 41.0 18 36.648583347948254 38.0 35.0 40.0 31.0 41.0 19 36.50149818464053 38.0 35.0 40.0 31.0 41.0 20 36.317449093439706 38.0 35.0 40.0 30.0 41.0 21 36.171707258825855 38.0 34.0 40.0 30.0 41.0 22 36.095751349858766 38.0 34.0 40.0 30.0 41.0 23 35.9940595019982 38.0 34.0 40.0 30.0 41.0 24 35.84564500300383 37.0 34.0 40.0 30.0 41.0 25 35.68745592202723 37.0 34.0 40.0 29.0 41.0 26 35.555571828904704 37.0 34.0 40.0 29.0 41.0 27 35.47353176039494 37.0 34.0 40.0 29.0 41.0 28 35.44252605497946 37.0 34.0 40.0 29.0 41.0 29 35.396766122742925 37.0 34.0 40.0 28.0 41.0 30 35.227439540880106 37.0 34.0 40.0 27.0 41.0 31 35.03981476989899 37.0 34.0 40.0 26.0 41.0 32 34.730921933945545 37.0 33.0 40.0 25.0 41.0 33 34.35864077524992 37.0 33.0 40.0 23.0 41.0 34 34.02236548988586 37.0 33.0 40.0 21.0 41.0 35 33.762645014198235 37.0 33.0 40.0 20.0 41.0 36 33.58624263501386 36.0 33.0 40.0 19.0 41.0 37 33.513743931699196 36.0 32.0 40.0 18.0 41.0 38 33.43049953170069 36.0 32.0 40.0 18.0 41.0 39 33.31854148087063 36.0 32.0 40.0 18.0 41.0 40 33.164101592963945 36.0 32.0 40.0 18.0 41.0 41 33.04059464683515 36.0 32.0 40.0 18.0 41.0 42 32.976849035975086 36.0 31.0 40.0 18.0 41.0 43 32.89302905694594 35.0 31.0 40.0 17.0 41.0 44 32.78634170550504 35.0 31.0 40.0 17.0 41.0 45 32.71827412114586 35.0 31.0 40.0 18.0 41.0 46 32.66274986846573 35.0 31.0 39.0 18.0 41.0 47 32.55490389602636 35.0 31.0 39.0 18.0 41.0 48 32.4653411868309 35.0 31.0 39.0 17.0 41.0 49 32.44101947453459 35.0 31.0 39.0 17.0 41.0 50 32.380805698698836 35.0 31.0 39.0 17.0 41.0 51 32.207179532148466 35.0 31.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 2.0 13 4.0 14 12.0 15 61.0 16 174.0 17 453.0 18 998.0 19 1926.0 20 3330.0 21 5088.0 22 7486.0 23 10477.0 24 14832.0 25 20870.0 26 27054.0 27 30191.0 28 30944.0 29 32045.0 30 35918.0 31 41729.0 32 49309.0 33 61534.0 34 87667.0 35 106832.0 36 89432.0 37 107771.0 38 138287.0 39 167486.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.02629565918259 22.533032825729222 23.61273326343049 20.827938251657706 2 38.013776582049395 23.445376896985344 26.084644633588443 12.456201887376816 3 28.489482855767545 24.112190334750046 34.7351217018482 12.663205107634212 4 25.462888679097436 26.583448697904032 33.440581959841936 14.5130806631566 5 22.17201323925057 29.64455895906952 33.71456504136333 14.468862760316577 6 20.842957412748937 38.233653368956425 31.28659171390084 9.636797504393805 7 80.41221533558964 4.4723516834520565 13.28841267057476 1.8270203103835578 8 80.39411771290827 4.0637558723986995 13.349049035228793 2.1930773794642358 9 75.13228056166066 5.888350728196096 15.19407368157886 3.7852950285643923 10 40.16478165311522 24.428152437955006 21.848588198857424 13.558477710072353 11 32.288304457985525 24.723498177177593 27.851308439462517 15.13688892537436 12 29.036049718087547 21.97424540376356 32.852129362553214 16.137575515595675 13 22.772126675895834 26.794276673470378 33.035810904097524 17.397785746536265 14 18.983380038881904 29.311805247191135 34.862178207477115 16.842636506449843 15 18.746898216731157 22.57827688243262 41.412771324410144 17.262053576426073 16 21.15238944591423 20.917027064341713 39.38191954207417 18.548663947669887 17 21.257523573552845 20.733158949367702 34.11075371934132 23.898563757738135 18 23.048441925288536 22.381255340664424 35.341018914814306 19.229283819232734 19 27.377691788157065 23.016444582094174 31.1055222003724 18.50034142937636 20 28.414853483885654 22.565776462642404 30.873798000679127 18.14557205279282 21 24.604557615740827 24.114429215906505 32.821344746651945 18.45966842170073 22 23.510491023952294 23.176338011351127 31.791086267822426 21.52208469687415 23 22.55654107787202 24.677321253325673 31.948367669063515 20.817769999738797 24 21.465273087529056 23.061875212227275 36.40430089070155 19.068550809542113 25 21.71434861618487 23.85033452615946 34.391640017761794 20.043676839893877 26 20.344619782007605 26.79940744278726 32.150333406718886 20.705639368486256 27 20.23668705292342 26.55051848756115 32.97041691698602 20.242377542529415 28 19.787511520909284 25.62576728322966 35.758943397352894 18.82777779850816 29 20.644070136683695 23.94809900332474 35.4553884272233 19.952442432768265 30 21.229630845811986 25.63005847211287 34.07922280972122 19.061087872353923 31 25.023228391998238 24.97033482467695 30.927624435148942 19.078812348175873 32 26.225600859730363 24.734412722815318 30.627521073468884 18.41246534398543 33 25.775958894141965 25.7833285446153 29.12243321604084 19.31827934520189 34 21.821628338265093 26.571228138258373 31.008224156781385 20.59891936669515 35 22.52930135713513 26.22289554499965 30.654667507490924 20.593135590374303 36 25.14319510729838 27.891328440134185 27.823508998436512 19.141967454130924 37 22.587512267203003 29.988600363445038 28.721393628890524 18.702493740461435 38 22.664473806956202 29.14342272688262 27.772201305267714 20.419902160893464 39 22.692179961267357 28.866920904060212 27.864928299830964 20.57597083484147 40 23.711710467888846 26.4460373669265 28.867853771208736 20.974398393975918 41 20.460015448279982 26.675615972178168 29.10358929964066 23.76077927990119 42 21.944860088585063 27.12563108462598 28.051501729535694 22.878007097253267 43 21.923870577743283 26.95528954330556 28.84154691762037 22.27929296133079 44 21.570407215167673 27.68563123388472 29.78029112917971 20.963670421767898 45 20.732226082219178 29.304902030292062 28.435376561153173 21.527495326335586 46 21.407528611035445 29.338205387494355 28.324272083764008 20.92999391770619 47 21.701568336250098 28.064935016474436 29.245664966360813 20.987831680914656 48 22.29235310141012 26.752390938501662 30.36734442574564 20.58791153434257 49 21.608561481542292 26.85836464657395 30.86764107749887 20.665432794384884 50 20.439678944442164 29.465168606408426 29.342030142803306 20.753122306346107 51 20.616084122227985 29.64259993805762 28.76467866458202 20.976637275132372 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1069.0 1 1736.0 2 2403.0 3 13936.0 4 25469.0 5 18225.5 6 10982.0 7 10931.0 8 10880.0 9 11228.0 10 11576.0 11 11345.5 12 11115.0 13 10745.5 14 10376.0 15 9909.5 16 9443.0 17 9133.5 18 8824.0 19 8371.0 20 7918.0 21 7637.0 22 7356.0 23 7728.0 24 8100.0 25 8648.5 26 9983.5 27 10770.0 28 12583.5 29 14397.0 30 16157.5 31 17918.0 32 20017.0 33 22116.0 34 26067.0 35 30018.0 36 32395.5 37 34773.0 38 36768.0 39 38763.0 40 45453.0 41 52143.0 42 58434.5 43 64726.0 44 66521.5 45 68317.0 46 69016.5 47 69716.0 48 67112.0 49 64508.0 50 64775.5 51 65043.0 52 61871.5 53 58700.0 54 56519.5 55 54339.0 56 55505.5 57 56672.0 58 54296.5 59 51921.0 60 48897.5 61 45874.0 62 41324.0 63 36774.0 64 31578.5 65 26383.0 66 22239.0 67 18095.0 68 15196.0 69 12297.0 70 10627.5 71 8958.0 72 7574.5 73 6191.0 74 4964.5 75 2835.5 76 1933.0 77 1459.0 78 985.0 79 837.0 80 689.0 81 478.0 82 267.0 83 194.0 84 121.0 85 92.5 86 64.0 87 45.5 88 27.0 89 19.0 90 11.0 91 8.5 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1071964.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.89304261014759 #Duplication Level Percentage of deduplicated Percentage of total 1 72.93957010600792 21.074461070387347 2 6.220381488450699 3.594514947943587 3 3.1929872483178094 2.767653498579131 4 2.1660132617340193 2.503308538617032 5 1.6506011865427523 2.3845445207569957 6 1.3967175649877306 2.4213252071719253 7 1.2078973471111343 2.4429880663136365 8 1.0089773263534758 2.3321939906403015 9 0.8761924370706853 2.2784278877075135 >10 9.152686857163442 52.5739958884141 >50 0.16658503195051386 2.946693029204305 >100 0.01944558573629125 0.9606564143368579 >500 0.0012963723823575801 0.2586346638387355 >1k 3.2409309558939503E-4 0.10244254968847816 >5k 0.0 0.0 >10k+ 3.2409309558939503E-4 1.3581597264000798 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14504 1.3530305122186939 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1094 0.1020556660484867 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009048811340679351 0.0 2 0.0 0.0 0.0 0.028265874600266427 0.0 3 0.0 0.0 0.0 0.04729636443014877 0.0 4 0.0 0.0 0.0 0.0684724487016355 0.0 5 0.0 0.0 0.0 0.1133433585456228 0.0 6 0.0 0.0 0.0 0.20952196155841055 0.0 7 0.0 0.0 0.0 0.2668932911926147 0.0 8 0.0 0.0 0.0 0.38975189465317867 0.0 9 0.0 0.0 0.0 0.4655939938281509 0.0 10 0.0 0.0 0.0 0.5650376318607715 0.0 11 0.0 0.0 0.0 0.6366818288673873 0.0 12 0.0 0.0 0.0 0.6954524592243769 0.0 13 0.0 0.0 0.0 0.7288491031415234 0.0 14 0.0 0.0 0.0 0.7482527398308152 0.0 15 0.0 0.0 0.0 0.7668167960864357 0.0 16 0.0 0.0 0.0 0.7977879854174207 0.0 17 0.0 0.0 0.0 0.8267068670216537 0.0 18 0.0 0.0 0.0 0.8728837908735742 0.0 19 0.0 0.0 0.0 0.8962987563015176 0.0 20 0.0 0.0 0.0 0.9216727427413607 0.0 21 0.0 0.0 0.0 0.9508714844901508 0.0 22 0.0 0.0 0.0 0.9838949815478878 0.0 23 0.0 0.0 0.0 1.0222358213522096 0.0 24 0.0 0.0 0.0 1.0547928848356847 0.0 25 0.0 0.0 0.0 1.085017780447851 0.0 26 0.0 0.0 0.0 1.1123507878995937 0.0 27 0.0 0.0 0.0 1.1500386206999489 0.0 28 0.0 0.0 0.0 1.182315824038867 0.0 29 0.0 0.0 0.0 1.2215895309917124 0.0 30 0.0 0.0 0.0 1.2708449164337607 0.0 31 0.0 0.0 0.0 1.3129172248321772 0.0 32 0.0 0.0 0.0 1.3600270158326213 0.0 33 0.0 0.0 0.0 1.4013530305122186 0.0 34 0.0 0.0 0.0 1.4499554089503006 0.0 35 0.0 0.0 0.0 1.5085394658775855 0.0 36 0.0 0.0 0.0 1.5620860402028427 0.0 37 0.0 0.0 0.0 1.6136735935162 0.0 38 0.0 0.0 0.0 1.6772018463306604 0.0 39 0.0 0.0 0.0 1.7695556940345012 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGACG 25 3.8906284E-5 45.000004 1 ACACGAC 40 6.8139343E-9 45.0 26 CGTTTTT 10630 0.0 42.75635 1 TACGGGA 220 0.0 41.93182 4 GTATACG 40 3.4579352E-7 39.375 1 CGTTAGG 145 0.0 38.793102 2 TAGGGCG 490 0.0 38.112244 5 CGTAAGG 160 0.0 37.96875 2 GGGCGAT 2270 0.0 37.1696 7 AGGGCGA 1185 0.0 36.835445 6 ACGGGTA 110 0.0 36.81818 5 GTTTTTT 12890 0.0 36.813423 2 TTACACG 130 0.0 36.346157 34 TAGCATA 590 0.0 36.228813 30 CGATTCG 50 4.8783477E-8 36.000004 10 ACGGGAT 200 0.0 36.000004 5 CGTGTAC 25 0.0021070451 36.000004 18 GTTGATC 615 0.0 35.853657 16 TATGGGC 365 0.0 35.75342 4 AGGGCGT 120 0.0 35.625 6 >>END_MODULE