SRR1545445_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545445_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1520242
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8525	0.5607659833105518	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5430	0.3571799752934072	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATATCG	20	7.034005E-4	45.000004	1
CCGTAAG	40	6.8175723E-9	45.000004	1
TACGAGT	20	7.034005E-4	45.000004	38
TCGTATA	20	7.034005E-4	45.000004	22
CATCGTA	20	7.034005E-4	45.000004	35
ACCCGTA	20	7.034005E-4	45.000004	33
TTGCAAC	20	7.034005E-4	45.000004	27
GTCCAAT	20	7.034005E-4	45.000004	36
TCAACTT	20	7.034005E-4	45.000004	39
TACCCGC	25	3.8914026E-5	45.0	40
TAACGCG	35	1.2122837E-7	45.0	1
CATTACG	25	3.8914026E-5	45.0	35
CGTTAGT	25	3.8914026E-5	45.0	22
TCGCTCA	25	3.8914026E-5	45.0	40
TGTTACG	25	3.8914026E-5	45.0	1
TTACGAG	35	1.2122837E-7	45.0	1
TAGTGCG	110	0.0	45.0	1
AATACGC	25	3.8914026E-5	45.0	17
GTGCCGT	35	1.2122837E-7	45.0	41
CTTATCG	30	2.165967E-6	44.999996	27