##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545445_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1520242 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.901296635667215 31.0 31.0 33.0 28.0 34.0 2 31.186881430719584 31.0 31.0 34.0 28.0 34.0 3 31.294557050785336 31.0 31.0 34.0 28.0 34.0 4 35.11101324657522 35.0 35.0 37.0 32.0 37.0 5 34.97201629740528 35.0 35.0 37.0 32.0 37.0 6 35.02136567730664 37.0 35.0 37.0 32.0 37.0 7 35.55067745793104 37.0 35.0 37.0 35.0 37.0 8 35.48037878179921 37.0 35.0 37.0 35.0 37.0 9 37.18088764815076 39.0 37.0 39.0 34.0 39.0 10 36.58894439174816 39.0 35.0 39.0 32.0 39.0 11 36.234078521709044 38.0 35.0 39.0 31.0 39.0 12 35.14956303009652 37.0 34.0 39.0 30.0 39.0 13 34.53052803435243 37.0 33.0 39.0 26.0 39.0 14 35.451889238686995 37.0 33.0 40.0 27.0 41.0 15 35.95373236629431 37.0 34.0 40.0 30.0 41.0 16 36.11387200195758 37.0 34.0 40.0 31.0 41.0 17 36.02831128201957 37.0 34.0 40.0 31.0 41.0 18 35.979692706819044 37.0 34.0 40.0 30.0 41.0 19 35.86553653957725 36.0 34.0 40.0 30.0 41.0 20 35.700935772067865 36.0 34.0 40.0 30.0 41.0 21 35.49831934652509 35.0 34.0 40.0 29.0 41.0 22 35.36174569575107 35.0 34.0 40.0 29.0 41.0 23 35.372251259996766 35.0 34.0 40.0 29.0 41.0 24 35.2512547344436 35.0 34.0 40.0 29.0 41.0 25 35.13506468049166 35.0 34.0 40.0 29.0 41.0 26 34.974831638647004 35.0 34.0 40.0 29.0 41.0 27 34.812833746206195 35.0 34.0 40.0 27.0 41.0 28 34.90890266154994 36.0 34.0 40.0 28.0 41.0 29 34.9957085779764 36.0 34.0 40.0 29.0 41.0 30 34.890295097754176 36.0 34.0 40.0 29.0 41.0 31 34.68897517632061 35.0 33.0 40.0 27.0 41.0 32 34.43120371625044 35.0 33.0 40.0 26.0 41.0 33 34.16811994406154 35.0 33.0 40.0 24.0 41.0 34 34.00674629433998 35.0 33.0 40.0 23.0 41.0 35 33.82693150169513 35.0 33.0 40.0 23.0 41.0 36 33.59622678494608 35.0 33.0 40.0 23.0 41.0 37 33.56315244546592 35.0 33.0 40.0 23.0 41.0 38 33.58308085160126 35.0 33.0 39.0 23.0 41.0 39 33.53563906272817 35.0 33.0 39.0 23.0 41.0 40 33.35073955330796 35.0 32.0 39.0 22.0 41.0 41 33.33825009439287 35.0 32.0 39.0 22.0 41.0 42 33.30257419542415 35.0 32.0 39.0 23.0 41.0 43 33.17325859961769 35.0 32.0 39.0 22.0 41.0 44 33.09982292292938 35.0 32.0 39.0 22.0 41.0 45 33.05001966792129 35.0 32.0 39.0 22.0 41.0 46 32.994773200582536 35.0 32.0 39.0 22.0 41.0 47 32.91567658307033 35.0 32.0 39.0 22.0 40.0 48 32.92763060091749 35.0 32.0 39.0 22.0 40.0 49 32.98797757199183 35.0 32.0 39.0 22.0 40.0 50 32.849001672102204 35.0 32.0 38.0 21.0 40.0 51 32.649856404440875 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 5.0 12 6.0 13 8.0 14 39.0 15 79.0 16 245.0 17 628.0 18 1532.0 19 2704.0 20 4376.0 21 6656.0 22 9787.0 23 13793.0 24 18908.0 25 26006.0 26 33419.0 27 38433.0 28 41480.0 29 45973.0 30 53636.0 31 63795.0 32 79165.0 33 100944.0 34 167018.0 35 226154.0 36 103137.0 37 117947.0 38 156992.0 39 207292.0 40 82.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.98316978481058 23.595190765680726 26.926305154047842 16.495334295460854 2 30.331815592517508 26.515317955957013 30.141911616703133 13.01095483482235 3 28.61241828603604 24.887221902828628 32.62158261645185 13.878777194683478 4 26.043879855970296 27.28322201333735 31.725672623174468 14.947225507517883 5 22.68092843113136 32.018915409520325 31.52037636113198 13.779779798216337 6 20.68157569650095 40.50960307635232 28.664449475807142 10.14437175133959 7 85.0214636880181 4.998414726076506 8.327292628410476 1.6528289574949253 8 86.57700550307122 3.776569782968764 7.938407174647194 1.70801753931282 9 81.86959707730743 5.317377101803529 9.784823732011088 3.028202088877955 10 54.22202517757041 20.10857481900908 14.803893064393694 10.865506939026814 11 49.69938996554496 18.826015858001554 19.653252574261202 11.821341602192282 12 44.3512282912852 20.590734896154693 23.222026493150434 11.836010319409674 13 20.210663828522037 43.209765287368725 23.766347726217273 12.813223157891967 14 14.109661488105182 44.28505461630451 27.63382408853327 13.971459807057036 15 13.782410958255332 22.028729636465773 51.16461721225962 13.024242193019269 16 15.618565991467149 16.4337651505484 49.435945066640706 18.511723791343744 17 15.708420106798787 17.92010745657599 29.140557884863068 37.230914551762154 18 21.0224424795526 21.967884060564042 37.669265814258516 19.34040764562484 19 31.222594823718858 22.440440403567326 26.438816977823265 19.89814779489055 20 33.06749846406033 21.098614562681465 26.58760907802837 19.246277895229838 21 22.085891588312915 29.35144536198842 28.553085627156726 20.009577422541938 22 22.787161517705734 24.503730327145284 25.1116598541548 27.59744830099418 23 19.10241922009785 30.894554945857305 25.603357886441763 24.399667947603078 24 18.825226509989857 22.735853896945354 42.91152329694877 15.527396296116013 25 16.323322207911637 24.130697612616938 40.005538591882086 19.540441587589346 26 16.16084807550377 34.90056188422633 28.259185050801122 20.679404989468782 27 16.780617822688757 36.66087372931415 29.519773825483046 17.03873462251405 28 14.731601942322342 28.83448819332711 40.1579485371408 16.27596132720975 29 15.637378785745954 23.633013691241263 39.08390900922353 21.645698513789252 30 17.189302755745466 32.83266743058013 31.742314710421105 18.2357151032533 31 29.969439076147086 26.584649022984497 25.83483419087224 17.611077709996174 32 32.229934444647625 24.458869048480437 26.94840689837539 16.36278960849654 33 29.75769647200906 26.41697834949962 25.301892724974053 18.52343245351727 34 19.47860932667299 26.664965183174782 28.619390860139372 25.237034630012857 35 19.935181372439388 25.25558430828776 32.50423287871273 22.305001440560122 36 31.483408562584113 25.817402755613912 24.94056867261923 17.75862000918275 37 20.163960737829896 34.78235701947453 28.50953992851138 16.54414231418419 38 19.83868357800929 35.249585263398856 24.026635233074735 20.88509592551712 39 20.287756817664558 33.61780558621588 27.31920312687059 18.775234469248975 40 25.533434808405502 25.692883106768527 24.89551005695146 23.87817202787451 41 15.908454048763291 25.027660069909924 27.61422194624277 31.449663935084022 42 20.79925432924495 25.15132459174263 24.35592491195481 29.693496167057614 43 21.276612539319398 25.72090496118381 26.408032405367038 26.59445009412975 44 18.873508296705392 29.6255464590506 29.486029197982955 22.014916046261057 45 16.98893991877609 39.707165043460186 21.78034812878476 21.523546908978965 46 20.918708995015265 35.33529530166908 24.750598917803877 18.99539678551178 47 20.884306577505424 27.957785668334385 27.03503784265926 24.12286991150093 48 22.645802444610794 24.162403091086816 32.36201867860512 20.829775785697276 49 21.564987679593116 24.265676122617318 33.999060675866076 20.170275521923482 50 19.519721202282266 35.27412083076247 26.068810097339767 19.137347869615496 51 17.372826168465284 35.996637377470165 23.986049589473254 22.644486864591297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1157.0 1 2008.5 2 2860.0 3 9083.0 4 15306.0 5 11571.0 6 7836.0 7 8146.5 8 8457.0 9 9201.5 10 9946.0 11 10138.5 12 10331.0 13 10275.5 14 10220.0 15 9570.5 16 8921.0 17 8340.0 18 7759.0 19 7428.0 20 7097.0 21 6891.5 22 6686.0 23 6997.5 24 7309.0 25 7443.0 26 9320.0 27 11063.0 28 13472.5 29 15882.0 30 18559.0 31 21236.0 32 25258.5 33 29281.0 34 31353.0 35 33425.0 36 35697.0 37 37969.0 38 48915.0 39 59861.0 40 83992.5 41 108124.0 42 136469.5 43 164815.0 44 163470.0 45 162125.0 46 151440.0 47 140755.0 48 127106.5 49 113458.0 50 109084.0 51 104710.0 52 99787.0 53 94864.0 54 84908.0 55 74952.0 56 68229.0 57 61506.0 58 57111.5 59 52717.0 60 47907.5 61 43098.0 62 37213.5 63 31329.0 64 25729.0 65 20129.0 66 15822.0 67 11515.0 68 9105.5 69 6696.0 70 5405.0 71 4114.0 72 3153.5 73 2193.0 74 1831.0 75 1090.5 76 712.0 77 564.5 78 417.0 79 305.0 80 193.0 81 129.0 82 65.0 83 70.5 84 76.0 85 46.0 86 16.0 87 12.0 88 8.0 89 7.0 90 6.0 91 3.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1520242.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.137435928002393 #Duplication Level Percentage of deduplicated Percentage of total 1 82.5715718865925 14.150650226809228 2 6.049422279600693 2.073431734361741 3 1.9731554399674418 1.0144447478529421 4 1.047235244226541 0.7178770759791313 5 0.6660279476207656 0.5707005639304903 6 0.4463678366850447 0.45897601209065936 7 0.33055860232244566 0.3965448807425655 8 0.2675569087135413 0.36681915041381596 9 0.21404118918953124 0.33013054491201277 >10 3.28197069237509 13.679184412504085 >50 1.4489672759347907 18.391432933437418 >100 1.693482912935744 45.817345554338466 >500 0.007327755715276506 0.7772014754101063 >1k 0.001542685413742422 0.3329163901386772 >5k 7.71342706871211E-4 0.9223442970786659 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8525 0.5607659833105518 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5430 0.3571799752934072 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009209060136478271 0.0 2 0.0 0.0 0.0 0.03446819651081867 0.0 3 0.0 0.0 0.0 0.05091294675452987 0.0 4 0.0 0.0 0.0 0.08524958526339885 0.0 5 0.0 0.0 0.0 0.13938570306569611 0.0 6 0.0 0.0 0.0 0.21279506815362292 0.0 7 0.0 0.0 0.0 0.2565381038018947 0.0 8 0.0 0.0 0.0 0.3976340608929368 0.0 9 0.0 0.0 0.0 0.45808496278881916 0.0 10 0.0 0.0 0.0 0.5447159070726898 0.0 11 0.0 0.0 0.0 0.6157572281255221 0.0 12 0.0 0.0 0.0 0.6871932231842036 0.0 13 0.0 0.0 0.0 0.7187013646511542 0.0 14 0.0 0.0 0.0 0.7286339937983558 0.0 15 0.0 0.0 0.0 0.7469205560693627 0.0 16 0.0 0.0 0.0 0.7832963436084518 0.0 17 0.0 0.0 0.0 0.8232241972001826 0.0 18 0.0 0.0 0.0 0.8882138501633292 0.0 19 0.0 0.0 0.0 0.9139992185454684 0.0 20 0.0 0.0 0.0 0.9434682109821989 0.0 21 0.0 0.0 0.0 0.9810937995398101 0.0 22 0.0 0.0 0.0 1.0180615980876728 0.0 23 0.0 0.0 0.0 1.0625939817476429 0.0 24 0.0 0.0 0.0 1.0976541892672351 0.0 25 0.0 0.0 0.0 1.1267942866990914 0.0 26 0.0 0.0 0.0 1.156657953141671 0.0 27 0.0 0.0 0.0 1.1885607686144706 0.0 28 0.0 0.0 0.0 1.2178982030492513 0.0 29 0.0 0.0 0.0 1.2512481565434976 0.0 30 6.577900097484479E-5 0.0 0.0 1.3010428602814552 0.0 31 6.577900097484479E-5 0.0 0.0 1.345575243941425 0.0 32 6.577900097484479E-5 0.0 0.0 1.387213351558502 0.0 33 6.577900097484479E-5 0.0 0.0 1.428719901173629 0.0 34 6.577900097484479E-5 0.0 0.0 1.4751598758618694 0.0 35 6.577900097484479E-5 0.0 0.0 1.5380446007938209 0.0 36 6.577900097484479E-5 0.0 0.0 1.583761006471338 0.0 37 6.577900097484479E-5 0.0 0.0 1.6294774121488553 0.0 38 6.577900097484479E-5 0.0 0.0 1.6767725138497687 0.0 39 6.577900097484479E-5 0.0 0.0 1.7299219466374431 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATATCG 20 7.034005E-4 45.000004 1 CCGTAAG 40 6.8175723E-9 45.000004 1 TACGAGT 20 7.034005E-4 45.000004 38 TCGTATA 20 7.034005E-4 45.000004 22 CATCGTA 20 7.034005E-4 45.000004 35 ACCCGTA 20 7.034005E-4 45.000004 33 TTGCAAC 20 7.034005E-4 45.000004 27 GTCCAAT 20 7.034005E-4 45.000004 36 TCAACTT 20 7.034005E-4 45.000004 39 TACCCGC 25 3.8914026E-5 45.0 40 TAACGCG 35 1.2122837E-7 45.0 1 CATTACG 25 3.8914026E-5 45.0 35 CGTTAGT 25 3.8914026E-5 45.0 22 TCGCTCA 25 3.8914026E-5 45.0 40 TGTTACG 25 3.8914026E-5 45.0 1 TTACGAG 35 1.2122837E-7 45.0 1 TAGTGCG 110 0.0 45.0 1 AATACGC 25 3.8914026E-5 45.0 17 GTGCCGT 35 1.2122837E-7 45.0 41 CTTATCG 30 2.165967E-6 44.999996 27 >>END_MODULE