##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545443_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1261554 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.907682905369093 31.0 31.0 33.0 28.0 34.0 2 31.194873148513658 31.0 31.0 34.0 28.0 34.0 3 31.283358461072613 31.0 31.0 34.0 28.0 34.0 4 35.13526571197111 35.0 35.0 37.0 32.0 37.0 5 35.015467431437735 35.0 35.0 37.0 32.0 37.0 6 35.06766416657551 37.0 35.0 37.0 32.0 37.0 7 35.55384232462502 37.0 35.0 37.0 35.0 37.0 8 35.46331429332395 37.0 35.0 37.0 35.0 37.0 9 37.14670477839236 39.0 37.0 39.0 34.0 39.0 10 36.520345542085394 38.0 35.0 39.0 32.0 39.0 11 36.248353221503 38.0 35.0 39.0 31.0 39.0 12 35.74771591227962 37.0 35.0 39.0 30.0 39.0 13 35.442215711733304 37.0 35.0 39.0 30.0 39.0 14 36.455913896670296 38.0 35.0 40.0 30.0 41.0 15 36.70583344034421 38.0 35.0 40.0 31.0 41.0 16 36.72667361048358 38.0 35.0 40.0 31.0 41.0 17 36.634137738059565 38.0 35.0 40.0 31.0 41.0 18 36.55252093846161 38.0 35.0 40.0 31.0 41.0 19 36.477808322117006 38.0 35.0 40.0 31.0 41.0 20 36.35268961931079 38.0 35.0 40.0 30.0 41.0 21 36.20132313004437 38.0 34.0 40.0 30.0 41.0 22 36.08387195474788 38.0 34.0 40.0 30.0 41.0 23 36.00770161245575 38.0 34.0 40.0 30.0 41.0 24 35.90575591690883 38.0 34.0 40.0 30.0 41.0 25 35.751316233787854 37.0 34.0 40.0 29.0 41.0 26 35.618518113374456 37.0 34.0 40.0 29.0 41.0 27 35.519424455869505 37.0 34.0 40.0 29.0 41.0 28 35.53183058355013 37.0 34.0 40.0 29.0 41.0 29 35.51310526541076 37.0 34.0 40.0 29.0 41.0 30 35.39358124979192 37.0 34.0 40.0 28.0 41.0 31 35.25834803742052 37.0 34.0 40.0 27.0 41.0 32 35.05334611122473 37.0 34.0 40.0 26.0 41.0 33 34.81328345833789 37.0 33.0 40.0 25.0 41.0 34 34.62458444109408 37.0 33.0 40.0 24.0 41.0 35 34.43915520064936 37.0 33.0 40.0 24.0 41.0 36 34.27634964496169 37.0 33.0 40.0 23.0 41.0 37 34.224263884066794 37.0 33.0 40.0 23.0 41.0 38 34.14737696523494 37.0 33.0 40.0 23.0 41.0 39 34.06436823156203 36.0 33.0 40.0 23.0 41.0 40 33.91967684300474 36.0 33.0 40.0 23.0 41.0 41 33.81978575629739 36.0 33.0 40.0 22.0 41.0 42 33.774115099314024 36.0 33.0 40.0 22.0 41.0 43 33.66620533088556 36.0 32.0 40.0 22.0 41.0 44 33.59302970780482 36.0 32.0 40.0 22.0 41.0 45 33.54705545699986 35.0 32.0 40.0 22.0 41.0 46 33.47522737829693 35.0 32.0 40.0 22.0 41.0 47 33.36823948875752 35.0 32.0 40.0 22.0 41.0 48 33.30425411833342 35.0 32.0 39.0 21.0 41.0 49 33.27883784602165 35.0 32.0 39.0 21.0 41.0 50 33.22600300898733 35.0 32.0 39.0 21.0 41.0 51 33.04444676961906 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 4.0 13 8.0 14 22.0 15 66.0 16 169.0 17 499.0 18 1042.0 19 2016.0 20 3342.0 21 5055.0 22 7406.0 23 10436.0 24 14494.0 25 19648.0 26 25424.0 27 29631.0 28 31798.0 29 35790.0 30 41225.0 31 48888.0 32 59275.0 33 74144.0 34 110060.0 35 137743.0 36 103009.0 37 124780.0 38 165926.0 39 209586.0 40 66.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.76014502748198 22.73656141552403 25.846297502921 16.65699605407299 2 34.304199423885144 24.20403724295591 28.110885463483925 13.38087786967502 3 29.2272863468389 25.193531152848 32.14432358820946 13.434858912103644 4 25.94736333125653 27.669128709512236 31.04187375253061 15.341634206700624 5 23.085971745957764 31.282450057627337 31.006916866023964 14.624661330390932 6 21.357785715078386 40.38939276479643 28.450862983273012 9.801958536852167 7 84.01574565971809 4.793928757706765 9.198258655594609 1.9920669269805336 8 84.5770375267329 4.088053305684893 9.332141152895556 2.0027680146866484 9 79.53341672255011 5.493938428319359 11.268800225753317 3.7038446233771998 10 43.427391930904264 24.928302712369028 18.215629295297706 13.428676061428998 11 35.84737553842325 24.367090112670564 24.5392587237645 15.246275625141688 12 32.263224562721845 22.766841530366516 29.183451520901997 15.786482386009638 13 22.560112369347646 31.20183519690794 29.10584881820358 17.132203615540835 14 18.82899978914894 33.241700315642454 31.016270409352277 16.91302948585633 15 18.417523150019736 23.501411750904044 40.789137841107085 17.29192725796914 16 20.235519050314135 21.077734286443544 39.253333586988745 19.433413076253572 17 20.45580292242742 20.976589190791675 31.42196053438854 27.145647352392366 18 22.814560454804152 23.37157188673652 33.442642962568385 20.37122469589094 19 28.153689814308386 23.68705580577605 27.827504807562736 20.331749572352827 20 28.93463141490574 23.66113539333235 28.313492724053035 19.090740467708873 21 24.702311593479152 26.09075790651847 30.239371441888334 18.967559058114038 22 23.968692580737724 24.21140910337568 28.834199725100945 22.98569859078565 23 21.731055507730943 27.469216537698742 28.73368876797981 22.066039186590505 24 20.835731169652664 24.50136894655322 35.63375012088266 19.02914976291146 25 20.746951775350084 25.495777430058485 33.03750770874652 20.71976308584492 26 20.003345080749614 28.991149011457296 29.440832497063145 21.564673410729938 27 19.97013207520249 29.3635468636301 30.83672993783857 19.829591123328846 28 19.405510980901333 27.08310543979885 34.36634499989695 19.14503857940286 29 19.824993618981036 24.723793036207724 34.727566160465585 20.723647184345655 30 20.82407887415045 27.490856515059996 32.241505318044254 19.443559292745295 31 25.645671925260434 26.586654237551464 28.1167512448932 19.6509225922949 32 27.12242202870428 25.811261349098018 28.589422252238112 18.47689436995959 33 25.856840055994436 26.60837348222906 27.395418666184725 20.139367795591788 34 20.760982090342544 26.991630956740654 30.005057254782592 22.242329698134206 35 22.17582441972361 26.23740244175041 30.516252177869518 21.07052096065646 36 26.25341443965141 27.36299833380101 26.677811651344296 19.70577557520328 37 21.633715243263467 30.54780056977347 28.53694728881998 19.281536898143084 38 22.45460757129699 30.586720822097192 26.50936860411841 20.449303002487408 39 21.728360418975328 30.150988384167466 27.027856120308762 21.092795076548448 40 23.8737303357605 26.753432671134174 27.51289282900296 21.85994416410237 41 20.064618716281664 26.34052922031082 28.19681123439821 25.3980408290093 42 22.058508791538056 27.203036889423682 26.684707907866013 24.053746411172252 43 22.11161789348692 27.333510892121936 27.766310439347023 22.78856077504411 44 20.763439377149133 28.351541035897 28.945808106509908 21.93921148044396 45 19.768317487796796 32.44371624203165 26.246835252395062 21.54113101777649 46 21.561899054657985 30.675103879818067 27.35721181970807 20.405785245815874 47 21.78083538239346 28.073788359436058 28.45419221055936 21.69118404761112 48 22.777384083439948 26.992661431853094 29.752194515652917 20.47775996905404 49 21.655513755257406 27.293480897369438 30.165652837690658 20.8853525096825 50 20.474430741767694 31.158555242185432 28.18682355253917 20.180190463507707 51 20.33785315571113 30.498099962427293 27.14089131341187 22.023155568449706 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 832.0 1 1618.0 2 2404.0 3 9502.0 4 16600.0 5 12189.0 6 7778.0 7 7827.0 8 7876.0 9 8102.0 10 8328.0 11 8193.5 12 8059.0 13 8067.5 14 8076.0 15 7680.5 16 7285.0 17 7100.0 18 6915.0 19 6662.5 20 6410.0 21 6570.0 22 6730.0 23 7156.5 24 7583.0 25 8942.5 26 11293.0 27 12284.0 28 14340.0 29 16396.0 30 20281.0 31 24166.0 32 26763.0 33 29360.0 34 32432.5 35 35505.0 36 37874.5 37 40244.0 38 45495.5 39 50747.0 40 60791.5 41 70836.0 42 83826.5 43 96817.0 44 97754.5 45 98692.0 46 95491.5 47 92291.0 48 90837.0 49 89383.0 50 85778.5 51 82174.0 52 80804.0 53 79434.0 54 72288.5 55 65143.0 56 64332.5 57 63522.0 58 59941.5 59 56361.0 60 52478.5 61 48596.0 62 41721.0 63 34846.0 64 29668.5 65 24491.0 66 20444.0 67 16397.0 68 13436.5 69 10476.0 70 8833.5 71 7191.0 72 6010.5 73 4830.0 74 3796.5 75 2213.5 76 1664.0 77 1268.5 78 873.0 79 674.0 80 475.0 81 369.5 82 264.0 83 186.0 84 108.0 85 65.5 86 23.0 87 17.5 88 12.0 89 10.5 90 9.0 91 5.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1261554.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.009476226717965 #Duplication Level Percentage of deduplicated Percentage of total 1 76.15652777923225 16.761652876663984 2 5.76890762034833 2.5394127024837734 3 2.637789431335064 1.7416909134017098 4 1.570002166481934 1.382197014363193 5 1.1429527674783204 1.25778958820378 6 0.9198609158648273 1.2147394175768358 7 0.759745257276299 1.1705116624869099 8 0.6683271292288512 1.1767624049946452 9 0.5920732897376593 1.172810069546014 >10 7.953132927197966 42.22423211828576 >50 1.7344243419940997 25.157255240276704 >100 0.09372331135534993 3.0447420528067473 >500 0.0014474642680360065 0.183740613561019 >1k 7.237321340180032E-4 0.2624297016400336 >5k 3.618660670090016E-4 0.7100336237089225 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8915 0.7066681251852873 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1882 0.14918108935487503 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1413 0.11200471799066865 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006341385307327312 0.0 2 0.0 0.0 0.0 0.022749719790036732 0.0 3 0.0 0.0 0.0 0.03400567871054271 0.0 4 0.0 0.0 0.0 0.048353062968370754 0.0 5 0.0 0.0 0.0 0.07704783148402684 0.0 6 0.0 0.0 0.0 0.13982754602656725 0.0 7 0.0 0.0 0.0 0.17510150179857542 0.0 8 0.0 0.0 0.0 0.27347224137849035 0.0 9 0.0 0.0 0.0 0.32563013553125747 0.0 10 0.0 0.0 0.0 0.40362917481138344 0.0 11 0.0 0.0 0.0 0.46720156251733974 0.0 12 0.0 0.0 0.0 0.5193594566701069 0.0 13 0.0 0.0 0.0 0.5467859481242975 0.0 14 0.0 0.0 0.0 0.5608162631167591 0.0 15 0.0 0.0 0.0 0.5731026971497059 0.0 16 0.0 0.0 0.0 0.6014803963999955 0.0 17 0.0 0.0 0.0 0.629699561017602 0.0 18 0.0 0.0 0.0 0.6791623664147551 0.0 19 0.0 0.0 0.0 0.7015157496230839 0.0 20 0.0 0.0 0.0 0.726326419638002 0.0 21 0.0 0.0 0.0 0.7574784749602474 0.0 22 0.0 0.0 0.0 0.7901366092929831 0.0 23 0.0 0.0 0.0 0.8269166440754815 0.0 24 0.0 0.0 0.0 0.858623570612118 0.0 25 0.0 0.0 0.0 0.8880317449748485 0.0 26 0.0 0.0 0.0 0.9168057808068462 0.0 27 0.0 0.0 0.0 0.9489090439251907 0.0 28 0.0 0.0 0.0 0.9766526046447477 0.0 29 0.0 0.0 0.0 1.011292421886023 0.0 30 0.0 0.0 0.0 1.0629747121407407 0.0 31 0.0 0.0 0.0 1.1058583302815417 0.0 32 0.0 0.0 0.0 1.1496138889021001 0.0 33 0.0 0.0 0.0 1.1925767743592426 0.0 34 0.0 0.0 0.0 1.2398200948988312 0.0 35 0.0 0.0 0.0 1.293166998796722 0.0 36 0.0 0.0 0.0 1.345166358316806 0.0 37 0.0 0.0 0.0 1.3952633022446919 0.0 38 0.0 0.0 0.0 1.4501162851530731 0.0 39 7.92673163415914E-5 0.0 0.0 1.5347737790058926 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGAACG 50 2.1827873E-11 45.0 1 CGTTTTT 6875 0.0 41.203636 1 TCGGACG 50 1.0822987E-9 40.5 1 TATACGG 100 0.0 40.5 2 GCGATCG 110 0.0 38.863632 9 TCGCACG 35 6.248776E-6 38.571426 35 ATTACGC 35 6.248776E-6 38.571426 25 CGTCTAC 35 6.248776E-6 38.571426 20 CGATACG 35 6.248776E-6 38.571426 10 TAGGGCG 450 0.0 38.5 5 AATGCGG 170 0.0 38.38235 2 GGCGATA 465 0.0 38.225807 8 GGGCGAT 2370 0.0 37.784813 7 TATGGGC 455 0.0 37.582417 4 GGTACGA 30 1.1399849E-4 37.500004 8 CTATCGT 30 1.1399849E-4 37.500004 14 TACGGAC 30 1.1399849E-4 37.500004 4 ATGCGTC 30 1.1399849E-4 37.500004 16 CGACGGT 110 0.0 36.81818 28 ATCGTAG 55 2.750312E-9 36.81818 1 >>END_MODULE