SRR1545441_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545441_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1386554
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	7272	0.5244656897603699	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7189	0.5184796264696506	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGTACG	115	0.0	45.000004	1
TGATCGC	20	7.033791E-4	45.0	40
CTATGCG	20	7.033791E-4	45.0	1
AAGTACG	20	7.033791E-4	45.0	44
TAATACG	105	0.0	45.0	1
GGTACGA	35	1.2121745E-7	45.0	8
ACACGGT	40	6.8175723E-9	45.0	3
TCACCGT	20	7.033791E-4	45.0	13
GATCGAC	20	7.033791E-4	45.0	16
GTACAAC	20	7.033791E-4	45.0	40
GCGGTAC	20	7.033791E-4	45.0	17
TAGACCG	35	1.2121745E-7	45.0	1
GTTTACG	40	6.8175723E-9	45.0	1
GCAACGA	20	7.033791E-4	45.0	11
ATAGCCG	45	3.8562575E-10	45.0	2
CGACACT	20	7.033791E-4	45.0	42
TATGCGT	20	7.033791E-4	45.0	21
CGTTCGA	20	7.033791E-4	45.0	14
TCGATAT	20	7.033791E-4	45.0	17
TCGATAG	90	0.0	45.0	1