##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545437_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1052555 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.00482730118616 31.0 31.0 33.0 30.0 34.0 2 31.290966267795984 31.0 31.0 34.0 30.0 34.0 3 31.383096370260937 31.0 31.0 34.0 30.0 34.0 4 35.224855708252775 37.0 35.0 37.0 33.0 37.0 5 35.10077668150358 37.0 35.0 37.0 32.0 37.0 6 35.15874799891692 37.0 35.0 37.0 32.0 37.0 7 35.61854154889768 37.0 35.0 37.0 35.0 37.0 8 35.531405009714454 37.0 35.0 37.0 35.0 37.0 9 37.234108431388385 39.0 37.0 39.0 34.0 39.0 10 36.66378954068909 39.0 35.0 39.0 32.0 39.0 11 36.37388164989003 38.0 35.0 39.0 32.0 39.0 12 35.62228197101339 37.0 35.0 39.0 31.0 39.0 13 35.1263829443592 37.0 35.0 39.0 30.0 39.0 14 36.155037979012974 38.0 35.0 40.0 30.0 41.0 15 36.51676824488982 38.0 35.0 40.0 31.0 41.0 16 36.60446437478326 38.0 35.0 40.0 31.0 41.0 17 36.52830208397661 38.0 35.0 40.0 31.0 41.0 18 36.4659528480697 38.0 35.0 40.0 31.0 41.0 19 36.38470103700044 37.0 35.0 40.0 31.0 41.0 20 36.21933770681817 37.0 35.0 40.0 31.0 41.0 21 36.04251559300939 37.0 34.0 40.0 30.0 41.0 22 35.94447036021871 37.0 34.0 40.0 30.0 41.0 23 35.899908318330155 37.0 34.0 40.0 30.0 41.0 24 35.77547776600748 37.0 34.0 40.0 30.0 41.0 25 35.61935860833876 36.0 34.0 40.0 30.0 41.0 26 35.49731177943195 36.0 34.0 40.0 29.0 41.0 27 35.39586054885493 36.0 34.0 40.0 29.0 41.0 28 35.43744412406002 36.0 34.0 40.0 29.0 41.0 29 35.481170105125145 36.0 34.0 40.0 29.0 41.0 30 35.38457657794604 36.0 34.0 40.0 29.0 41.0 31 35.20350955532015 36.0 34.0 40.0 29.0 41.0 32 34.98312962268005 36.0 34.0 40.0 27.0 41.0 33 34.72461866600795 36.0 33.0 40.0 26.0 41.0 34 34.54905064343431 36.0 34.0 40.0 25.0 41.0 35 34.35806964956701 36.0 33.0 40.0 24.0 41.0 36 34.15803259687142 36.0 33.0 40.0 23.0 41.0 37 34.099266071606706 36.0 33.0 40.0 23.0 41.0 38 34.07087895644408 36.0 33.0 40.0 23.0 41.0 39 34.01190911638822 36.0 33.0 40.0 23.0 41.0 40 33.83658526157778 35.0 33.0 40.0 23.0 41.0 41 33.786955551016334 35.0 33.0 40.0 23.0 41.0 42 33.76938307261853 35.0 33.0 40.0 23.0 41.0 43 33.67594187477139 35.0 33.0 40.0 23.0 41.0 44 33.632619673081216 35.0 33.0 40.0 23.0 41.0 45 33.56911990347298 35.0 33.0 40.0 23.0 41.0 46 33.494143298924996 35.0 32.0 39.0 23.0 41.0 47 33.432446760501826 35.0 32.0 39.0 23.0 41.0 48 33.38221280598164 35.0 32.0 39.0 22.0 41.0 49 33.39657405076219 35.0 32.0 39.0 22.0 41.0 50 33.293517203376545 35.0 32.0 39.0 22.0 41.0 51 33.10580064699707 35.0 32.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 6.0 14 15.0 15 33.0 16 128.0 17 321.0 18 766.0 19 1421.0 20 2464.0 21 3822.0 22 5749.0 23 8247.0 24 11424.0 25 16160.0 26 20714.0 27 23969.0 28 26373.0 29 28800.0 30 33680.0 31 41290.0 32 50514.0 33 64563.0 34 104043.0 35 136515.0 36 78726.0 37 93669.0 38 126934.0 39 172154.0 40 52.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.070575884395595 23.56057403176081 27.00371952059512 16.365130563248474 2 32.852154994275836 25.078404453924026 29.111447857831656 12.957992693968487 3 29.175007481794303 24.600139660160277 32.455311123884265 13.769541734161162 4 26.051750264831767 27.3941029209875 31.684615055745308 14.869531758435425 5 22.782467424505132 31.0298274199448 31.741334182061742 14.446370973488321 6 21.379595365562846 40.35418576701455 28.485827343939274 9.780391523483335 7 84.27455097358333 4.780557785578901 9.130069212535211 1.814822028302559 8 85.04458199334002 4.117314534632395 8.94936606638133 1.8887374056462607 9 80.1611317223328 6.224472830398412 10.480212435454678 3.1341830118141094 10 48.176579846183806 23.427089320748085 16.828289258043522 11.568041575024584 11 43.119646954315925 22.490226163953427 21.356318672183402 13.033808209547246 12 39.2177130886272 21.965788011077805 25.581466051655262 13.235032848639738 13 21.948401746227038 36.94001738626485 25.793236457952318 15.318344409555795 14 15.436057973217551 39.499883616533104 29.532328476896698 15.53172993335265 15 15.11778481884557 23.917229978480933 46.63480768225888 14.330177520414612 16 16.923676197443363 19.626242809164367 45.225380146405655 18.224700846986618 17 16.91911586567923 19.590330196521798 31.47046947665443 32.02008446114455 18 21.01125356869712 23.271658013120454 34.99646099253721 20.720627425645215 19 30.16716466122911 23.558008845143487 27.375006531725184 18.899819961902228 20 31.36890708799065 22.46476431160367 26.992128677361276 19.1741999230444 21 23.280968690472232 26.627777170789173 29.478364551021087 20.612889587717508 22 22.51549800247968 25.989900765280677 26.623026825201535 24.871574407038114 23 21.03595536575286 29.432001178085702 27.506306083767594 22.02573737239384 24 20.034107481319268 23.436209984276356 38.55237968562213 17.977302848782248 25 18.302891535359198 25.577570768273393 36.270978713701425 19.84855898266599 26 18.272584330510043 32.952102265439805 29.001334847110126 19.773978556940015 27 19.043280398649003 33.369562635681746 30.011448332866212 17.575708632803035 28 16.836459852454265 28.93463999505964 37.515759271487 16.71314088099909 29 17.507968704723268 25.687303751347912 36.56968044425232 20.2350470996765 30 19.35015272361064 29.60272859850554 31.963175321004606 19.083943356879214 31 27.499560593033145 26.431397884196073 27.040107167796457 19.028934354974325 32 29.577266746155782 26.676515716518377 27.618224225812426 16.127993311513414 33 27.283039841148444 27.209409484539997 26.402895810670223 19.10465486364133 34 20.51940278655272 27.720546669770226 29.006275206521277 22.75377533715578 35 22.019181895482898 25.052182546280243 30.980328818921578 21.948306739315285 36 28.769042947874457 27.183377590719726 25.740792642664758 18.306786818741063 37 21.384915752621005 33.669404449173676 28.13696196398288 16.80871783422244 38 21.818432290949165 33.40281505479524 24.192465001828882 20.586287652426712 39 22.125494629734312 31.480445202388474 26.400615644788157 19.993444523089053 40 24.008151593028394 26.503128102569462 27.40844896466218 22.080271339739966 41 17.368783579005374 26.85921400781907 28.64220872068443 27.129793692491127 42 21.805986385509545 27.638650711839286 25.06909377657224 25.48626912607892 43 21.720955199490763 27.798072309760535 27.023955992798477 23.457016497950224 44 19.88228643633824 31.120654027580507 28.539981283638383 20.457078252442866 45 18.548864429887274 35.848863004783595 24.2014906584454 21.400781906883726 46 20.361691313043025 33.54760558830655 26.10333901791355 19.987364080736874 47 22.470844753955852 28.332391181458448 27.036021870591085 22.16074219399461 48 22.655253169668093 25.720461163549647 30.493798423835333 21.130487242946923 49 20.853162067540413 26.784633582093097 31.490230914299016 20.871973436067474 50 19.52430039285358 34.1938426020493 26.421422158462025 19.86043484663509 51 19.2312040700961 33.205485699084605 25.382901606091846 22.18040862472745 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 796.0 1 1512.5 2 2229.0 3 7238.0 4 12247.0 5 9277.5 6 6308.0 7 6449.5 8 6591.0 9 6915.5 10 7240.0 11 7341.0 12 7442.0 13 7179.0 14 6916.0 15 6639.5 16 6363.0 17 6416.0 18 6469.0 19 6045.0 20 5621.0 21 5459.0 22 5297.0 23 5585.0 24 5873.0 25 6866.0 26 8561.0 27 9263.0 28 11551.5 29 13840.0 30 16670.0 31 19500.0 32 22043.5 33 24587.0 34 26461.0 35 28335.0 36 28673.0 37 29011.0 38 35846.5 39 42682.0 40 56663.0 41 70644.0 42 81084.0 43 91524.0 44 95571.0 45 99618.0 46 94577.5 47 89537.0 48 81980.0 49 74423.0 50 72029.0 51 69635.0 52 64491.0 53 59347.0 54 55550.5 55 51754.0 56 47808.5 57 43863.0 58 43246.5 59 42630.0 60 40829.5 61 39029.0 62 32575.5 63 26122.0 64 20934.0 65 15746.0 66 12648.0 67 9550.0 68 7638.5 69 5727.0 70 4675.0 71 3623.0 72 2951.5 73 2280.0 74 1926.5 75 1191.0 76 809.0 77 580.0 78 351.0 79 250.0 80 149.0 81 100.5 82 52.0 83 52.0 84 52.0 85 43.5 86 35.0 87 20.0 88 5.0 89 4.0 90 3.0 91 3.0 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1052555.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.150016266587404 #Duplication Level Percentage of deduplicated Percentage of total 1 78.82766807040466 15.095511258054017 2 5.380839425772833 2.0608632506288913 3 2.093704963437638 1.2028345232179665 4 1.2193831360349119 0.9340482756108371 5 0.8438294585987083 0.8079673929195452 6 0.6803994346076719 0.7817796144308273 7 0.574248520350832 0.7697807954047526 8 0.4859237158519385 0.7444357650308174 9 0.4377240150459194 0.7544179807564776 >10 6.4589032029972335 30.431272386022645 >50 2.574662786275995 34.69485248536744 >100 0.41922389220853856 10.401458563903507 >500 0.0014954478913503158 0.2033287452608659 >1k 0.0014954478913503158 0.48693893407308775 >5k 4.984826304501053E-4 0.6305100293183189 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6605 0.6275206521274423 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2245 0.2132905168851034 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1665 0.158186508068462 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1191 0.11315323189762054 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007410539116720741 0.0 2 0.0 0.0 0.0 0.024416776320477316 0.0 3 0.0 0.0 0.0 0.03515255734854711 0.0 4 0.0 0.0 0.0 0.05472398116963009 0.0 5 0.0 0.0 0.0 0.09614699469386398 0.0 6 0.0 0.0 0.0 0.15201105880452803 0.0 7 0.0 0.0 0.0 0.18307831894770343 0.0 8 0.0 0.0 0.0 0.26810950496648633 0.0 9 0.0 0.0 0.0 0.3037370968737976 0.0 10 0.0 0.0 0.0 0.36957688671850875 0.0 11 0.0 0.0 0.0 0.4260109922996898 0.0 12 0.0 0.0 0.0 0.4741794965583746 0.0 13 0.0 0.0 0.0 0.497456189937818 0.0 14 0.0 0.0 0.0 0.5070518880248538 0.0 15 0.0 0.0 0.0 0.522633021552318 0.0 16 0.0 0.0 0.0 0.5489499361078518 0.0 17 0.0 0.0 0.0 0.5811572791920612 0.0 18 0.0 0.0 0.0 0.6330310530091064 0.0 19 0.0 0.0 0.0 0.6547876358005045 0.0 20 0.0 0.0 0.0 0.6770192531506667 0.0 21 0.0 0.0 0.0 0.7100816584406515 0.0 22 0.0 0.0 0.0 0.7480844231417836 0.0 23 0.0 0.0 0.0 0.7878923191662194 0.0 24 0.0 0.0 0.0 0.8166794134273269 0.0 25 0.0 0.0 0.0 0.8427113072476022 0.0 26 0.0 0.0 0.0 0.8701683047441702 0.0 27 0.0 0.0 0.0 0.8966752331232097 0.0 28 0.0 0.0 0.0 0.926697417237104 0.0 29 0.0 0.0 0.0 0.959664815615336 0.0 30 0.0 0.0 0.0 1.003272988109885 0.0 31 0.0 0.0 0.0 1.0431758910460736 0.0 32 0.0 0.0 0.0 1.082033717952981 0.0 33 0.0 0.0 0.0 1.1226016692714396 0.0 34 0.0 0.0 0.0 1.1646897311779432 0.0 35 0.0 0.0 0.0 1.2150433944069432 0.0 36 0.0 0.0 0.0 1.265397057635943 0.0 37 0.0 0.0 0.0 1.3147056448356618 0.0 38 0.0 0.0 0.0 1.3589788657124806 0.0 39 0.0 0.0 0.0 1.4100925842355032 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACC 20 7.033014E-4 45.000004 18 ACGCCTA 20 7.033014E-4 45.000004 38 ACACCGT 20 7.033014E-4 45.000004 19 TTCGTAC 20 7.033014E-4 45.000004 33 CGTTATG 20 7.033014E-4 45.000004 2 GCGATAT 85 0.0 45.000004 9 CGTACAT 20 7.033014E-4 45.000004 35 CTCGACC 20 7.033014E-4 45.000004 28 ATCGGAT 20 7.033014E-4 45.000004 40 TGCGTTA 20 7.033014E-4 45.000004 22 GTCGATG 50 2.1827873E-11 45.0 1 CTAACCG 25 3.890582E-5 45.0 3 CGGATAT 25 3.890582E-5 45.0 34 TACGAAG 35 1.2117926E-7 45.0 1 ACGGATA 25 3.890582E-5 45.0 33 CGGGCTA 45 3.8562575E-10 45.0 6 ACGTAAG 25 3.890582E-5 45.0 1 CGCGTAA 25 3.890582E-5 45.0 31 CGTAAGG 125 0.0 41.399998 2 ACGTAGG 60 3.6379788E-12 41.249996 2 >>END_MODULE