##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545434_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1145408 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.81769378247751 31.0 31.0 33.0 28.0 34.0 2 31.102698776331227 31.0 31.0 34.0 28.0 34.0 3 31.17974817706878 31.0 31.0 34.0 28.0 34.0 4 35.059274075264014 35.0 35.0 37.0 32.0 37.0 5 34.9421350296139 35.0 35.0 37.0 32.0 37.0 6 34.99291868050511 36.0 35.0 37.0 32.0 37.0 7 35.473335265686984 36.0 35.0 37.0 33.0 37.0 8 35.3753553318992 37.0 35.0 37.0 33.0 37.0 9 37.0627156436833 39.0 37.0 39.0 33.0 39.0 10 36.44792772531709 38.0 35.0 39.0 32.0 39.0 11 36.16121242386992 38.0 35.0 39.0 31.0 39.0 12 35.64325986897245 37.0 35.0 39.0 30.0 39.0 13 35.309025255629436 37.0 35.0 39.0 30.0 39.0 14 36.3081530773314 38.0 35.0 40.0 30.0 41.0 15 36.571977845448956 38.0 35.0 40.0 31.0 41.0 16 36.604664014918704 38.0 35.0 40.0 31.0 41.0 17 36.511108705369615 38.0 35.0 40.0 31.0 41.0 18 36.39710216796111 38.0 35.0 40.0 30.0 41.0 19 36.266290265128234 37.0 35.0 40.0 30.0 41.0 20 36.07536353858188 37.0 34.0 40.0 30.0 41.0 21 35.91097670000559 37.0 34.0 40.0 30.0 41.0 22 35.81228522936805 37.0 34.0 40.0 30.0 41.0 23 35.69342452645695 37.0 34.0 40.0 29.0 41.0 24 35.58048049254065 37.0 34.0 40.0 29.0 41.0 25 35.42431517852154 37.0 34.0 40.0 29.0 41.0 26 35.27080394060457 37.0 34.0 40.0 28.0 41.0 27 35.17809461781304 37.0 34.0 40.0 27.0 41.0 28 35.17826660892887 37.0 34.0 40.0 27.0 41.0 29 35.15688296222831 36.0 34.0 40.0 27.0 41.0 30 35.01595152120467 36.0 34.0 40.0 27.0 41.0 31 34.83828557160418 36.0 33.0 40.0 26.0 41.0 32 34.547363908755656 36.0 33.0 40.0 24.0 41.0 33 34.23713995362351 36.0 33.0 40.0 23.0 41.0 34 33.97527518578533 36.0 33.0 40.0 23.0 41.0 35 33.73268564563893 36.0 33.0 40.0 21.0 41.0 36 33.542991667597924 36.0 32.0 40.0 20.0 41.0 37 33.49291431524836 36.0 32.0 40.0 20.0 41.0 38 33.41391189864223 36.0 32.0 40.0 20.0 41.0 39 33.30440856009387 36.0 32.0 40.0 19.0 41.0 40 33.138522692350676 35.0 32.0 40.0 18.0 41.0 41 33.02109728585796 35.0 31.0 40.0 18.0 41.0 42 32.95427306252444 35.0 31.0 40.0 18.0 41.0 43 32.852379239537356 35.0 31.0 40.0 18.0 41.0 44 32.75860741325362 35.0 31.0 39.0 18.0 41.0 45 32.69681545789797 35.0 31.0 39.0 18.0 41.0 46 32.62075522433928 35.0 31.0 39.0 18.0 41.0 47 32.53886388081801 35.0 31.0 39.0 18.0 41.0 48 32.474352370509024 35.0 31.0 39.0 18.0 41.0 49 32.479664014918704 35.0 31.0 39.0 18.0 41.0 50 32.39467770436386 35.0 31.0 39.0 18.0 41.0 51 32.2136147119629 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 4.0 12 0.0 13 9.0 14 27.0 15 71.0 16 190.0 17 610.0 18 1342.0 19 2418.0 20 4015.0 21 5882.0 22 8588.0 23 12102.0 24 16286.0 25 22059.0 26 28043.0 27 31210.0 28 32925.0 29 35061.0 30 39743.0 31 46502.0 32 56192.0 33 68788.0 34 100827.0 35 123829.0 36 92583.0 37 110386.0 38 141341.0 39 164337.0 40 37.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.84391587975638 22.63481658937252 23.38494230876683 19.136325222104265 2 35.236003240766614 24.383713052466895 26.36676188746717 14.013521819299324 3 27.902808431580713 24.93879910040789 33.27364572274683 13.88474674526457 4 25.858384086718445 27.08100519640163 31.746766217801863 15.313844499078058 5 21.839903335754595 30.823165195284126 32.50806699446835 14.828864474492931 6 20.662680896239593 38.75928926635749 30.24380831983014 10.334221517572779 7 81.0068551991954 5.0125370173772135 11.51816645247807 2.462441330949321 8 81.78098983069788 4.42855296977147 11.647639967592333 2.142817231938314 9 76.86422654634855 5.790163854277253 13.486373414538749 3.8592361848354475 10 43.43116164720344 24.43260392803263 19.472537296753643 12.663697128010282 11 35.59072400402302 24.04304841593563 26.09725093591105 14.268976644130301 12 31.244499776498852 22.089159496004918 30.30064396267531 16.36569676482092 13 22.092913616807287 30.436839973179865 30.027640805721628 17.442605604291224 14 18.48433047438118 31.829618790858806 32.05870746493826 17.627343269821758 15 17.359927641504164 22.94221796949209 41.88036053528524 17.8174938537185 16 19.4904348494161 20.376843884449908 40.417301083980554 19.715420182153434 17 19.91857923115606 20.298793093814606 31.712891825445606 28.069735849583726 18 23.09063669888808 22.414021903112253 34.37779376431804 20.117547633681625 19 28.228718500307316 22.421268229312176 29.279086578756214 20.070926691624294 20 28.97587584511371 22.173408951220875 29.47124518075655 19.37947002290887 21 24.352021288484103 25.633922584790746 30.932122003687766 19.08193412303738 22 24.89732916131195 23.136209979326143 29.5208344974018 22.445626361960105 23 21.59021064982958 27.393557579482597 29.586400653740853 21.429831116946975 24 20.465807816952562 23.86154104039783 37.24681510867743 18.425836033972175 25 19.797399703860982 25.308274431468963 34.61552564675644 20.278800217913616 26 19.472013465944013 27.349817706878248 31.377640107280552 21.800528719897187 27 20.061934262725597 27.341436413924118 32.09790747052579 20.498721852824495 28 18.567881488517628 25.86405892048947 35.51110172095882 20.056957870034083 29 19.078965748449463 24.322512152874783 35.688767670559315 20.909754428116443 30 19.661814829301 26.85453567637034 33.15630762138906 20.3273418729396 31 26.081186791082306 24.721933145219868 29.36141532100352 19.835464742694306 32 26.398191736045145 24.869915348941163 29.56780465999888 19.164088255014807 33 25.684210342515506 25.411207185561825 27.933452533944237 20.971129937978432 34 20.76631209141197 26.263479912834555 30.359662233893946 22.61054576185953 35 22.021498016427334 25.887020170978374 30.86873847572219 21.222743336872103 36 26.393913784433142 26.978072442308765 26.346769011566185 20.281244761691905 37 21.091087193384368 30.834078337151478 28.06109264122479 20.01374182823937 38 22.44885665195284 30.226434597977313 26.307743616248537 21.016965133821312 39 21.9885839805554 29.493857210705706 27.0465196681008 21.471039140638094 40 24.78811043750349 25.770642426104935 27.56729479801084 21.873952338380732 41 20.324373498351676 25.249954601329833 28.611638822148965 25.814033078169523 42 22.50508115885344 25.903084315807117 26.478948985863553 25.112885539475887 43 22.669040202268537 26.173555623847573 27.555421299659162 23.60198287422473 44 21.53887523048556 27.58073978879142 28.647695842878697 22.232689137844332 45 19.890728893110577 31.030340280493938 26.044518634408004 23.03441219198748 46 21.337636894451585 29.461903531318097 27.345539755266245 21.85491981896407 47 21.38417053137397 27.729158518187408 28.616265994300722 22.270404956137902 48 22.025950578309214 26.61837528636084 30.36210677767224 20.993567357657707 49 22.046554590154773 26.550539196513384 30.28597670000559 21.116929513326255 50 20.586812733977762 30.336962898809855 28.627702966977708 20.448521400234675 51 19.986066100463766 30.655713946471476 26.656789545733922 22.70143040733084 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 921.0 1 1612.5 2 2304.0 3 11236.5 4 20169.0 5 14689.5 6 9210.0 7 9224.5 8 9239.0 9 9484.0 10 9729.0 11 9807.5 12 9886.0 13 9785.0 14 9684.0 15 9158.0 16 8632.0 17 8337.0 18 8042.0 19 7787.5 20 7533.0 21 7074.5 22 6616.0 23 6833.0 24 7050.0 25 7896.5 26 9547.0 27 10351.0 28 11959.0 29 13567.0 30 16559.5 31 19552.0 32 20632.0 33 21712.0 34 26016.0 35 30320.0 36 32847.5 37 35375.0 38 38278.0 39 41181.0 40 50368.0 41 59555.0 42 68638.5 43 77722.0 44 79053.0 45 80384.0 46 80099.5 47 79815.0 48 77590.0 49 75365.0 50 73599.0 51 71833.0 52 69644.0 53 67455.0 54 65183.0 55 62911.0 56 60308.5 57 57706.0 58 57015.5 59 56325.0 60 52022.5 61 47720.0 62 43202.5 63 38685.0 64 33421.0 65 28157.0 66 23370.0 67 18583.0 68 15689.5 69 12796.0 70 10440.0 71 8084.0 72 6730.5 73 5377.0 74 4303.5 75 2587.0 76 1944.0 77 1540.5 78 1137.0 79 788.0 80 439.0 81 322.0 82 205.0 83 150.0 84 95.0 85 73.0 86 51.0 87 30.5 88 10.0 89 7.5 90 5.0 91 3.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1145408.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.491522586726166 #Duplication Level Percentage of deduplicated Percentage of total 1 75.35500349157138 19.209137735282212 2 6.069496101106457 3.094413939028033 3 2.812778596336012 2.1510602735987807 4 1.8310646188243846 1.867065003540678 5 1.3887023776987781 1.7700069013674369 6 1.0947121236669912 1.674352729585204 7 0.9583204857538864 1.710033381554231 8 0.792085697168062 1.6153176351985914 9 0.6757704142912507 1.5503775101412043 >10 8.099665415275634 47.82463926585239 >50 0.8720942136129786 13.973211171143326 >100 0.0482390757340833 1.9646892675605216 >500 6.891296533432219E-4 0.09257790093022057 >1k 0.0010336944800148327 0.4918749954546824 >5k 0.0 0.0 >10k+ 3.4456482667161094E-4 1.011242289762457 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11513 1.005144018550595 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 2620 0.2287394535396994 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1963 0.17137997988489692 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011087752137229703 0.0 2 0.0 0.0 0.0 0.03885078504777337 0.0 3 0.0 0.0 0.0 0.05989132256802816 0.0 4 0.0 0.0 0.0 0.08774166061351064 0.0 5 0.0 0.0 0.0 0.16151449963681064 0.0 6 0.0 0.0 0.0 0.26235193049114375 0.0 7 0.0 0.0 0.0 0.33298178465664635 0.0 8 0.0 0.0 0.0 0.4938851483488853 0.0 9 0.0 0.0 0.0 0.5627688998156115 0.0 10 0.0 0.0 0.0 0.6437880650388333 0.0 11 0.0 0.0 0.0 0.6987029949153489 0.0 12 0.0 0.0 0.0 0.7563243839749678 0.0 13 0.0 0.0 0.0 0.7926433201095155 0.0 14 0.0 0.0 0.0 0.8087074649382578 0.0 15 0.0 0.0 0.0 0.8304464435380231 0.0 16 0.0 0.0 0.0 0.8601301894172207 0.0 17 0.0 0.0 0.0 0.8912981225903783 0.0 18 0.0 0.0 0.0 0.9397524724814215 0.0 19 0.0 0.0 0.0 0.9591342124378387 0.0 20 0.0 0.0 0.0 0.9863734145387495 0.0 21 0.0 0.0 0.0 1.0150968039336201 0.0 22 0.0 0.0 0.0 1.0454789908923283 0.0 23 0.0 0.0 0.0 1.085115522154551 0.0 24 0.0 0.0 0.0 1.1169818964072191 0.0 25 0.0 0.0 0.0 1.1544357992959713 0.0 26 0.0 0.0 0.0 1.1842068503101078 0.0 27 0.0 0.0 0.0 1.2177320221266135 0.0 28 0.0 0.0 0.0 1.2472411577359335 0.0 29 0.0 0.0 0.0 1.2830362630608483 0.0 30 0.0 0.0 0.0 1.3376019723976085 0.0 31 0.0 0.0 0.0 1.3748812650164832 0.0 32 8.730513493881655E-5 0.0 0.0 1.4223752584231995 0.0 33 8.730513493881655E-5 0.0 0.0 1.4639325026540762 0.0 34 8.730513493881655E-5 0.0 0.0 1.5138710398390791 0.0 35 8.730513493881655E-5 0.0 0.0 1.5635476616192658 0.0 36 8.730513493881655E-5 0.0 0.0 1.6069383136838575 0.0 37 8.730513493881655E-5 0.0 0.0 1.6552180533050231 0.0 38 8.730513493881655E-5 0.0 0.0 1.7069899983237413 0.0 39 8.730513493881655E-5 0.0 0.0 1.7825089400458178 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATAGCG 25 3.890798E-5 45.0 1 GTCACGC 20 7.0332777E-4 45.0 22 GTATACG 20 7.0332777E-4 45.0 1 CGGTCAT 20 7.0332777E-4 45.0 32 CGTTCGA 65 0.0 41.53846 14 CGTTTTT 8785 0.0 41.13261 1 TATACGG 90 0.0 40.0 2 ATAGGGC 475 0.0 39.789474 4 GTTACCG 35 6.2482686E-6 38.57143 38 CGTAAGG 140 0.0 38.57143 2 GGGCGAT 2220 0.0 38.412163 7 AGGGCGA 1105 0.0 37.66968 6 TAACGGG 305 0.0 37.62295 3 TATCGTG 30 1.1399197E-4 37.499996 1 CATTAGA 415 0.0 37.40964 17 TAGGGTC 325 0.0 37.384617 5 CGGTAGT 320 0.0 37.265625 12 GTTGATC 600 0.0 37.125 16 TAGTAGG 540 0.0 37.083336 2 TTGCGGG 605 0.0 36.818184 3 >>END_MODULE