##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545433_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1128173 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.960530876026993 31.0 31.0 33.0 30.0 34.0 2 31.237714428549523 31.0 31.0 34.0 28.0 34.0 3 31.344880616713926 31.0 31.0 34.0 28.0 34.0 4 35.150155162373146 37.0 35.0 37.0 32.0 37.0 5 35.02590826052387 37.0 35.0 37.0 32.0 37.0 6 35.07320863023668 37.0 35.0 37.0 32.0 37.0 7 35.58507782051157 37.0 35.0 37.0 35.0 37.0 8 35.5202801343411 37.0 35.0 37.0 35.0 37.0 9 37.23386572803994 39.0 37.0 39.0 34.0 39.0 10 36.64496225312962 39.0 35.0 39.0 32.0 39.0 11 36.26663463848186 38.0 35.0 39.0 32.0 39.0 12 35.322232494484446 37.0 35.0 39.0 30.0 39.0 13 34.776007757675465 37.0 33.0 39.0 27.0 39.0 14 35.72606151716093 38.0 34.0 40.0 27.0 41.0 15 36.15283471595225 38.0 34.0 40.0 30.0 41.0 16 36.29283097539118 38.0 34.0 40.0 31.0 41.0 17 36.21194355830178 37.0 34.0 40.0 31.0 41.0 18 36.15795272533556 37.0 35.0 40.0 31.0 41.0 19 36.076261353533546 37.0 35.0 40.0 30.0 41.0 20 35.9363838702043 36.0 34.0 40.0 30.0 41.0 21 35.74311563917945 36.0 34.0 40.0 30.0 41.0 22 35.61107915186766 36.0 34.0 40.0 30.0 41.0 23 35.593862820684414 36.0 34.0 40.0 30.0 41.0 24 35.497276570171415 36.0 34.0 40.0 29.0 41.0 25 35.370270339743996 35.0 34.0 40.0 29.0 41.0 26 35.23178625973144 35.0 34.0 40.0 29.0 41.0 27 35.103492992652725 35.0 34.0 40.0 29.0 41.0 28 35.173566465426845 36.0 34.0 40.0 29.0 41.0 29 35.25473043584628 36.0 34.0 40.0 29.0 41.0 30 35.185601853616426 36.0 34.0 40.0 29.0 41.0 31 35.01356884094904 36.0 34.0 40.0 29.0 41.0 32 34.77854194347853 35.0 34.0 40.0 27.0 41.0 33 34.53247507252877 35.0 33.0 40.0 26.0 41.0 34 34.38197155932645 35.0 33.0 40.0 25.0 41.0 35 34.19243325270149 35.0 33.0 40.0 24.0 41.0 36 33.968987912314866 35.0 33.0 40.0 23.0 41.0 37 33.927850604472894 35.0 33.0 40.0 23.0 41.0 38 33.94778283117926 35.0 33.0 40.0 23.0 41.0 39 33.90183065895036 35.0 33.0 40.0 23.0 41.0 40 33.7276109249202 35.0 33.0 40.0 23.0 41.0 41 33.719032453356 35.0 33.0 40.0 23.0 41.0 42 33.67976808521388 35.0 33.0 40.0 23.0 41.0 43 33.57663408005687 35.0 33.0 40.0 23.0 41.0 44 33.513852928584534 35.0 33.0 39.0 23.0 41.0 45 33.461393775600015 35.0 32.0 39.0 23.0 41.0 46 33.42305568383572 35.0 32.0 39.0 23.0 41.0 47 33.347202069186196 35.0 32.0 39.0 23.0 41.0 48 33.320072364788025 35.0 32.0 39.0 23.0 41.0 49 33.37750415937981 35.0 32.0 39.0 23.0 41.0 50 33.254940510010435 35.0 32.0 39.0 23.0 41.0 51 33.06659085087128 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 2.0 12 2.0 13 3.0 14 14.0 15 65.0 16 151.0 17 427.0 18 964.0 19 1666.0 20 2843.0 21 4424.0 22 6587.0 23 9142.0 24 12912.0 25 17727.0 26 22993.0 27 26597.0 28 29000.0 29 32338.0 30 37848.0 31 45823.0 32 56463.0 33 71804.0 34 118186.0 35 159520.0 36 78159.0 37 91318.0 38 126019.0 39 175101.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.14764047712541 23.192542278533523 28.252315912541782 16.40750133179929 2 30.91236893632448 25.670442387825272 30.34844833194909 13.068740343901156 3 28.734334184562123 24.992354895924652 32.25214572587715 14.021165193636081 4 25.868550302125648 27.58548555939559 31.816485592191977 14.729478546286783 5 22.503729481205454 32.15721347701106 30.86911315906337 14.469943882720116 6 21.546872687079023 40.16724385355792 27.97301477698899 10.312868682374068 7 85.35942625820685 4.914139941303328 8.031480987401755 1.6949528130880636 8 86.89598137874245 3.8294658709258247 7.610268992432897 1.664283757898833 9 82.8232903996107 5.3112421587823855 9.297244305616248 2.568223135990668 10 51.66450535511841 24.125289295170155 14.256678718600782 9.953526631110654 11 46.50412658342293 20.226419175073325 21.750033017985718 11.519421223518025 12 41.446391643834765 22.237369623275864 24.348127459175146 11.968111273714227 13 21.169536941586088 40.085341521202864 25.04952697857509 13.695594558635953 14 14.868907516843604 42.72128476749577 28.718733740304014 13.691073975356616 15 14.682056741297655 23.105144335132998 49.383294937921754 12.829503985647591 16 15.825675672082207 18.875296607878404 47.748882485221685 17.55014523481771 17 16.064646113672282 18.660258666002466 30.6207469953633 34.65434822496195 18 21.042162859774166 22.858816865853022 36.91428530907937 19.184734965293444 19 30.611173995477643 22.988584197636357 27.315048312625812 19.08519349426019 20 33.2687451304011 22.286741483797254 25.86376380218282 18.580749583618825 21 22.934514476059967 28.60846696384331 28.768105600825404 19.688912959271317 22 22.354107038548165 25.448136057147263 26.020388716978694 26.17736818732588 23 18.80048538654976 31.43507245785886 27.021210399468877 22.74323175612251 24 19.45880640646426 23.465284136386884 41.3165356731636 15.759373783985259 25 16.890317353810097 25.40558939098879 38.245375487624685 19.458717767576427 26 16.911945242440655 35.238123940211295 28.39103577199596 19.458895045352087 27 17.220142655426073 35.447400354378274 29.6213435350784 17.711113455117257 28 14.683829519054258 28.772626184104745 39.88395396805277 16.659590328788227 29 15.644940979796537 24.77084631523711 39.048443811365814 20.53576889360054 30 17.692322010897264 31.191935988540763 33.22717349200876 17.88856850855321 31 28.274830190050636 26.996834705315585 26.95508578914759 17.77324931548619 32 30.640424828461594 25.80012108072078 27.96574638818692 15.593707702630713 33 28.645163463404995 27.72376222441062 25.702972859658935 17.928101452525453 34 19.504278155921124 26.938687594899008 29.890008004091573 23.667026245088298 35 20.52034572711809 25.889380440765734 32.56317958327313 21.02709424884304 36 29.227432317561224 27.351744812187494 25.996190300601064 17.42463256965022 37 20.205766314208905 34.583703031361324 28.54003774243844 16.670492911991335 38 19.972557400327787 34.87098166681883 24.88776100828508 20.268699924568306 39 20.60384355945409 33.25562657500224 27.026440093850855 19.114089771692814 40 24.468233152184993 26.924859928397503 26.2056439925437 22.401262926873805 41 16.743619994451205 25.641812027056133 28.012459082073406 29.602108896419253 42 21.08240491484905 27.12598156488411 24.46787859663367 27.323734923633165 43 21.470288687993776 27.164450842202392 26.21317829800926 25.152082171794575 44 18.94000299599441 31.50527445702033 29.123104346585144 20.431618200400116 45 17.063517740630203 37.80430838178187 23.623061356724545 21.509112520863376 46 19.90864876220225 34.78030408456859 26.330979379935528 18.980067773293634 47 21.374381411361558 27.75700180734692 27.462100227536023 23.406516553755495 48 21.982621459652023 24.571674734282777 32.39822261302123 21.047481193043975 49 20.441013922510113 25.284951864651962 33.8344385125331 20.43959570030483 50 18.370054947246565 35.126261663769654 26.718685875304587 19.784997513679194 51 17.584182567744485 35.64089904651148 25.15970511614797 21.615213269596065 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 726.0 1 1309.5 2 1893.0 3 6964.5 4 12036.0 5 8890.5 6 5745.0 7 6092.0 8 6439.0 9 6815.0 10 7191.0 11 7345.0 12 7499.0 13 7248.0 14 6997.0 15 6423.0 16 5849.0 17 5673.0 18 5497.0 19 5599.5 20 5702.0 21 5937.5 22 6173.0 23 6600.0 24 7027.0 25 6863.0 26 7934.0 27 9169.0 28 12175.0 29 15181.0 30 18258.0 31 21335.0 32 23547.0 33 25759.0 34 28275.5 35 30792.0 36 32733.5 37 34675.0 38 41710.5 39 48746.0 40 66634.0 41 84522.0 42 101467.5 43 118413.0 44 119949.5 45 121486.0 46 110746.0 47 100006.0 48 91291.5 49 82577.0 50 76790.0 51 71003.0 52 67131.0 53 63259.0 54 56865.0 55 50471.0 56 47039.5 57 43608.0 58 41689.5 59 39771.0 60 35392.5 61 31014.0 62 26691.5 63 22369.0 64 17308.0 65 12247.0 66 9339.0 67 6431.0 68 5204.0 69 3977.0 70 3152.5 71 2328.0 72 2028.5 73 1729.0 74 1298.5 75 684.5 76 501.0 77 371.0 78 241.0 79 178.5 80 116.0 81 90.0 82 64.0 83 41.0 84 18.0 85 13.0 86 8.0 87 8.0 88 8.0 89 6.5 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1128173.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.963049816380522 #Duplication Level Percentage of deduplicated Percentage of total 1 81.06880958679318 14.562430651622327 2 5.383585461927471 1.934112276866902 3 1.8826058342192393 1.0145202715406643 4 1.0185376490626246 0.7318417011988412 5 0.6912087963542973 0.620810902121633 6 0.5316581621897765 0.5730121231620161 7 0.42150491458281103 0.5300059644950176 8 0.35272899255009965 0.5068870771887324 9 0.3110846322311641 0.5029225871290934 >10 4.906448601201636 21.733130888032502 >50 2.3698660806927183 30.927223546225964 >100 1.0575075828856928 24.979420720585555 >500 0.002969136872865773 0.3117416345520052 >1k 9.897122909552575E-4 0.4591233368865432 >5k 4.948561454776288E-4 0.6128163183922225 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6894 0.6110764927010308 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3759 0.3331935793535211 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1406 0.12462627628918614 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006204722148110263 0.0 2 0.0 0.0 0.0 0.025971194134232958 0.0 3 0.0 0.0 0.0 0.03696241622517114 0.0 4 0.0 0.0 0.0 0.06080627705148058 0.0 5 0.0 0.0 0.0 0.10512572096655388 0.0 6 0.0 0.0 0.0 0.162031886953508 0.0 7 0.0 0.0 0.0 0.19970341428132032 0.0 8 0.0 0.0 0.0 0.29853577421193384 0.0 9 0.0 0.0 0.0 0.3425893014635167 0.0 10 0.0 0.0 0.0 0.4061433840377318 0.0 11 0.0 0.0 0.0 0.4669496610892124 0.0 12 0.0 0.0 0.0 0.5252740492814488 0.0 13 0.0 0.0 0.0 0.5450405212675715 0.0 14 0.0 0.0 0.0 0.554347604489737 0.0 15 0.0 0.0 0.0 0.5668456876737876 0.0 16 0.0 0.0 0.0 0.5964510762090566 0.0 17 0.0 0.0 0.0 0.6301338535845123 0.0 18 0.0 0.0 0.0 0.68313990850694 0.0 19 0.0 0.0 0.0 0.7084019915385318 0.0 20 8.863888783014661E-5 0.0 0.0 0.7329549634674823 0.0 21 8.863888783014661E-5 0.0 0.0 0.7662831852916175 0.0 22 8.863888783014661E-5 0.0 0.0 0.7989022960131115 0.0 23 8.863888783014661E-5 0.0 0.0 0.8417148788350722 0.0 24 8.863888783014661E-5 0.0 0.0 0.8726498506877934 0.0 25 8.863888783014661E-5 0.0 0.0 0.898355128158536 0.0 26 8.863888783014661E-5 0.0 0.0 0.9246808778440895 0.0 27 8.863888783014661E-5 0.0 0.0 0.9510952664174732 0.0 28 8.863888783014661E-5 0.0 0.0 0.9809665716162326 0.0 29 8.863888783014661E-5 0.0 0.0 1.0105719601515015 0.0 30 8.863888783014661E-5 0.0 0.0 1.0542709318517638 0.0 31 8.863888783014661E-5 0.0 0.0 1.0937152369361791 0.0 32 8.863888783014661E-5 0.0 0.0 1.1297026253952187 0.0 33 8.863888783014661E-5 0.0 0.0 1.1658672916299184 0.0 34 8.863888783014661E-5 0.0 0.0 1.2045138467238623 0.0 35 8.863888783014661E-5 0.0 0.0 1.2626609571404386 0.0 36 8.863888783014661E-5 0.0 0.0 1.3103486787930574 0.0 37 8.863888783014661E-5 0.0 0.0 1.3518316782975661 0.0 38 8.863888783014661E-5 0.0 0.0 1.398278455520563 0.0 39 1.7727777566029323E-4 0.0 0.0 1.4481821493689355 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 20 7.0332305E-4 45.000004 16 AACCCGT 20 7.0332305E-4 45.000004 32 CGTGACC 20 7.0332305E-4 45.000004 27 CCGTGTA 20 7.0332305E-4 45.000004 29 CCGTCGA 20 7.0332305E-4 45.000004 5 CCGTAGA 20 7.0332305E-4 45.000004 2 TCCGTAG 20 7.0332305E-4 45.000004 1 TATAGCG 40 6.8157533E-9 45.000004 1 ACCGTTG 20 7.0332305E-4 45.000004 20 ACGTATC 20 7.0332305E-4 45.000004 22 TAAATCG 20 7.0332305E-4 45.000004 17 CCGTTGA 20 7.0332305E-4 45.000004 21 CGACACT 25 3.89076E-5 45.0 39 ACGGGTA 70 0.0 45.0 5 TCTCGAG 25 3.89076E-5 45.0 1 ACTACGC 25 3.89076E-5 45.0 35 GTACTAC 25 3.89076E-5 45.0 31 CAAATCG 25 3.89076E-5 45.0 1 CCACGTG 75 0.0 45.0 21 GTGCGAC 25 3.89076E-5 45.0 30 >>END_MODULE