SRR1545432_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545432_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1344263
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10659	0.7929251939538617	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1882	0.14000236560851562	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGACGG	125	0.0	45.000004	2
ATTACCG	35	1.2121382E-7	45.000004	1
ACCGAAT	25	3.8911592E-5	45.000004	16
ATCGTAC	50	2.1827873E-11	45.000004	29
TATGTCG	25	3.8911592E-5	45.000004	1
CGTCAGT	35	1.2121382E-7	45.000004	42
TTGATCG	20	7.033715E-4	45.0	1
CAACGAC	20	7.033715E-4	45.0	12
CTATCGA	20	7.033715E-4	45.0	33
TAGCGAT	20	7.033715E-4	45.0	28
TAGCCGT	55	6.184564E-11	40.909092	44
CGTACTC	55	6.184564E-11	40.909092	31
CGTTTTT	8410	0.0	40.90666	1
CGGTCTA	155	0.0	40.645164	31
AGCGTAA	50	1.0822987E-9	40.500004	15
GCGCGAC	415	0.0	40.120483	9
ATCGTAG	45	1.9286745E-8	40.0	1
GCTACGA	125	0.0	39.600002	10
ACTAACC	165	0.0	39.545452	14
AGGGCGA	1410	0.0	38.617023	6