SRR1545431_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545431_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1655465
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7227	0.4365540799714884	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	7144	0.431540382913562	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACG	65	0.0	45.000004	1
GCGAATC	35	1.2123564E-7	45.000004	32
ATCGTAC	35	1.2123564E-7	45.000004	28
CGGTGTC	35	1.2123564E-7	45.000004	14
ACGTCGA	35	1.2123564E-7	45.000004	16
TATACGT	35	1.2123564E-7	45.000004	13
TATCGAC	35	1.2123564E-7	45.000004	23
ATCGACG	35	1.2123564E-7	45.000004	24
TCGCCTA	20	7.0341874E-4	45.0	33
CTTCGAA	25	3.8915525E-5	45.0	36
AGGTAGC	20	7.0341874E-4	45.0	45
TCCGCGT	25	3.8915525E-5	45.0	31
ACGCCCG	25	3.8915525E-5	45.0	40
GTCGACA	20	7.0341874E-4	45.0	28
CGACGTG	25	3.8915525E-5	45.0	42
ACGCATC	25	3.8915525E-5	45.0	29
CTATCGT	20	7.0341874E-4	45.0	13
ACGTTAG	80	0.0	45.0	1
CGGTTAC	25	3.8915525E-5	45.0	34
CCGCTAG	25	3.8915525E-5	45.0	1