##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545431_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1655465 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.9412038309478 31.0 31.0 33.0 28.0 34.0 2 31.22972155859532 31.0 31.0 34.0 28.0 34.0 3 31.314380551687893 31.0 31.0 34.0 28.0 34.0 4 35.144431322921356 35.0 35.0 37.0 32.0 37.0 5 35.00757732721622 35.0 35.0 37.0 32.0 37.0 6 35.04358473299043 37.0 35.0 37.0 32.0 37.0 7 35.57055993331179 37.0 35.0 37.0 35.0 37.0 8 35.52001643042891 37.0 35.0 37.0 35.0 37.0 9 37.27803849673656 39.0 37.0 39.0 34.0 39.0 10 36.69441576837928 39.0 37.0 39.0 32.0 39.0 11 36.257707653136734 38.0 35.0 39.0 32.0 39.0 12 34.953290465216725 35.0 34.0 39.0 30.0 39.0 13 34.231071028381756 35.0 33.0 39.0 25.0 39.0 14 35.12009918663336 36.0 33.0 40.0 25.0 41.0 15 35.669243988849054 36.0 33.0 40.0 30.0 41.0 16 35.90911737789685 36.0 34.0 40.0 31.0 41.0 17 35.860506262590874 36.0 34.0 40.0 31.0 41.0 18 35.81528815166735 36.0 34.0 40.0 30.0 41.0 19 35.69996043407743 36.0 34.0 40.0 30.0 41.0 20 35.50178107057533 35.0 34.0 40.0 30.0 41.0 21 35.26039209527232 35.0 34.0 40.0 29.0 41.0 22 35.12865629898548 35.0 34.0 40.0 29.0 41.0 23 35.138527845650614 35.0 34.0 40.0 29.0 41.0 24 35.06638557746615 35.0 34.0 40.0 29.0 41.0 25 34.93576789602921 35.0 34.0 39.0 29.0 41.0 26 34.77124070880387 35.0 34.0 39.0 29.0 41.0 27 34.584985487461225 35.0 33.0 39.0 27.0 41.0 28 34.70308946428949 35.0 34.0 39.0 28.0 41.0 29 34.814420721670345 35.0 34.0 39.0 29.0 41.0 30 34.761917044455785 35.0 34.0 39.0 29.0 41.0 31 34.508327267565306 35.0 33.0 39.0 27.0 41.0 32 34.194948851229114 35.0 33.0 39.0 25.0 41.0 33 33.91118567894821 35.0 33.0 39.0 24.0 41.0 34 33.76816906428103 35.0 33.0 39.0 23.0 41.0 35 33.59111850748883 35.0 33.0 39.0 23.0 41.0 36 33.30143011178128 35.0 33.0 39.0 22.0 41.0 37 33.25912961010955 35.0 32.0 39.0 23.0 41.0 38 33.30098914806414 35.0 32.0 39.0 23.0 41.0 39 33.30855681032217 35.0 33.0 39.0 23.0 41.0 40 33.1121032459158 35.0 32.0 39.0 22.0 41.0 41 33.12029792233602 35.0 32.0 39.0 22.0 41.0 42 33.06109642909998 35.0 32.0 39.0 22.0 41.0 43 32.8970319517477 35.0 32.0 39.0 21.0 41.0 44 32.85050363493037 35.0 32.0 38.0 21.0 41.0 45 32.80574521358047 35.0 32.0 38.0 22.0 40.0 46 32.768730839975476 35.0 32.0 38.0 22.0 40.0 47 32.68354571072176 35.0 32.0 38.0 21.0 40.0 48 32.698368736276514 35.0 32.0 38.0 20.0 40.0 49 32.76387963502702 35.0 32.0 38.0 20.0 40.0 50 32.63322631405678 35.0 32.0 38.0 20.0 40.0 51 32.425081774607136 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 5.0 12 1.0 13 6.0 14 25.0 15 66.0 16 262.0 17 697.0 18 1647.0 19 2986.0 20 4955.0 21 7561.0 22 11225.0 23 16027.0 24 21821.0 25 29305.0 26 37923.0 27 42711.0 28 46204.0 29 50790.0 30 59160.0 31 71737.0 32 88530.0 33 113483.0 34 196128.0 35 272199.0 36 102106.0 37 113982.0 38 153977.0 39 209868.0 40 76.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.076202154681614 25.152449613854717 28.220953025282924 16.550395206180742 2 30.61405707761867 25.653819319647347 30.453014711878534 13.27910889085544 3 26.796338188968054 25.771792215480243 33.55770131050792 13.874168285043778 4 25.205546477877817 28.774694723234862 31.649536535052086 14.370222263835236 5 22.963699021120952 32.477279797519124 31.361883217102143 13.197137964257777 6 20.876672113273308 39.97620004047201 28.460281552313095 10.686846293941581 7 85.09433905277369 5.342184824203471 8.01267317641871 1.5508029466041264 8 87.69016560301787 3.657643018728877 7.302177937920766 1.3500134403324746 9 84.76923402186092 4.837009541125907 8.448744008481 1.9450124285321648 10 60.65027046781418 19.045766597300457 11.86222602108773 8.441736913797634 11 54.58049551032489 17.354338509119792 18.39948292473716 9.665683055818155 12 47.10905999220763 20.97211357533986 21.949603283669543 9.96922314878297 13 19.48787802822772 47.978845822774865 22.0439574379404 10.489318711057013 14 13.368751378011618 49.051414557239205 27.28598913296264 10.293844931786538 15 11.126541485322855 21.24714204166201 56.84741145237139 10.778905020643746 16 13.005832198204129 15.649681509424845 53.661901640928676 17.682584651442344 17 13.42921777264998 16.128338563485183 29.41463576698994 41.0278078968749 18 20.11042214725168 21.17900408646513 39.0369473229576 19.673626443325592 19 32.4934081964886 21.693663109760703 25.700211118930333 20.11271757482037 20 35.118833681171154 21.561434400606476 24.83048569435174 18.489246223870634 21 22.210436342659012 30.05638899040451 28.881432105178906 18.851742561757572 22 23.054791252004726 24.970204746098528 24.74114523713881 27.23385876475794 23 17.91828881915353 32.79767316131721 24.827827830851152 24.456210188678106 24 17.486023564376172 22.843732727662623 44.68732350125191 14.982920206709293 25 14.773734268015332 24.441169097504325 41.57375722229102 19.211339412189325 26 14.410815088207846 37.98080901740599 28.405795350551056 19.202580543835115 27 15.784628488068305 38.853554741417064 29.409501257954712 15.952315512559915 28 12.879946117858124 28.49972666290136 43.820920406049055 14.79940681319146 29 12.915585651161457 23.971270911798197 42.9751761589644 20.137967278075948 30 15.90495721745854 33.72375737330599 32.83917207551957 17.532113333715905 31 32.44659355528507 26.401283023198918 24.36668851349923 16.78543490801678 32 34.149800811252426 25.28135599363321 26.581655305306967 13.987187889807394 33 30.326222541702784 27.125852857052244 24.542409534481248 18.00551506676372 34 18.143784374782914 28.16785616125983 28.280875766023446 25.407483697933813 35 19.61279761275533 24.784033489080105 33.2028765331795 22.400292364985063 36 34.111865850380404 23.24241225275074 25.596071194498222 17.049650702370634 37 19.50672469668643 34.79995046708931 28.60114831784423 17.092176518380032 38 18.755153385906677 36.26026524269616 23.720646464890528 21.26393490650663 39 19.116502010009274 34.67164814719732 27.13195386190587 19.079895980887546 40 25.821143908207063 25.296215866841038 23.512668645969562 25.36997157898234 41 15.659890121506645 23.304147173150746 27.253973958978296 33.78198874636432 42 20.303902528896714 24.305376435019767 24.592969346981057 30.79775168910246 43 20.94861564575512 25.50606627141015 25.61811938035537 27.927198702479362 44 18.133152920780564 30.360593549244474 30.3968371424343 21.109416387540662 45 15.366437828646331 41.966094118570915 21.51178067793641 21.155687374846345 46 21.06097078464359 36.34356510104412 24.478016750580654 18.11744736373164 47 21.04544644556061 27.62843068261788 25.84705807733779 25.479064794483726 48 23.043253708172628 22.70884615500781 33.57020535015842 20.67769478666115 49 21.011075438018924 22.404702002156494 35.549830410186864 21.034392149637714 50 18.26640853174184 37.201873793767916 24.836043045307513 19.69567462918274 51 16.87012410410368 37.705720145095185 23.198436693013747 22.225719057787387 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1865.0 1 2277.0 2 2689.0 3 8408.5 4 14128.0 5 11077.0 6 8026.0 7 9028.0 8 10030.0 9 10889.0 10 11748.0 11 12180.0 12 12612.0 13 12399.0 14 12186.0 15 11634.0 16 11082.0 17 10606.5 18 10131.0 19 9535.5 20 8940.0 21 8136.5 22 7333.0 23 7872.0 24 8411.0 25 8516.5 26 9190.5 27 9759.0 28 11354.5 29 12950.0 30 14733.5 31 16517.0 32 21542.0 33 26567.0 34 28539.5 35 30512.0 36 36255.5 37 41999.0 38 55587.5 39 69176.0 40 101027.5 41 132879.0 42 166810.5 43 200742.0 44 199006.5 45 197271.0 46 178512.5 47 159754.0 48 145725.0 49 131696.0 50 120038.0 51 108380.0 52 104084.0 53 99788.0 54 87156.0 55 74524.0 56 68693.5 57 62863.0 58 58641.5 59 54420.0 60 47269.0 61 40118.0 62 33211.5 63 26305.0 64 20366.5 65 14428.0 66 10947.5 67 7467.0 68 5689.5 69 3912.0 70 3178.5 71 2445.0 72 1985.0 73 1525.0 74 1163.5 75 643.0 76 484.0 77 349.5 78 215.0 79 145.5 80 76.0 81 53.5 82 31.0 83 20.5 84 10.0 85 16.0 86 22.0 87 20.5 88 19.0 89 12.5 90 6.0 91 3.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1655465.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.285727415570335 #Duplication Level Percentage of deduplicated Percentage of total 1 83.86398647820698 13.657860237671555 2 6.123221011352239 1.99442216592351 3 1.9262132366060183 0.9410935114688731 4 0.9219468716891095 0.6005830177586655 5 0.5544181269895311 0.45145512452012815 6 0.37757856522246247 0.36894849547051023 7 0.28595441126611765 0.3259882916611921 8 0.21797600446953505 0.28399182335407913 9 0.17600053171818686 0.2579667016102049 >10 2.4761193474803807 9.882468515915093 >50 1.1108233962195975 13.25780994625901 >100 1.95046861407968 55.64416640404934 >500 0.014174375087976256 1.3782363482854905 >1k 3.730098707362173E-4 0.08200895055471669 >5k 7.460197414724346E-4 0.8730004654976544 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7227 0.4365540799714884 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7144 0.431540382913562 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012987287559688667 0.0 2 0.0 0.0 0.0 0.046029363351082625 0.0 3 0.0 0.0 0.0 0.06403034796869762 0.0 4 0.0 0.0 0.0 0.10528763821645278 0.0 5 0.0 0.0 0.0 0.16514997296832007 0.0 6 0.0 0.0 0.0 0.27122288903721914 0.0 7 6.040598864971473E-5 0.0 0.0 0.3231720392759738 0.0 8 6.040598864971473E-5 0.0 0.0 0.48167735349282526 0.0 9 6.040598864971473E-5 0.0 0.0 0.5509026164853984 0.0 10 6.040598864971473E-5 0.0 0.0 0.6502704678141791 0.0 11 6.040598864971473E-5 0.0 0.0 0.7374363094357175 0.0 12 6.040598864971473E-5 0.0 0.0 0.8123397353613637 0.0 13 6.040598864971473E-5 0.0 0.0 0.8480396746533452 0.0 14 6.040598864971473E-5 0.0 0.0 0.8631411718157738 0.0 15 6.040598864971473E-5 0.0 0.0 0.8821086522517843 0.0 16 6.040598864971473E-5 0.0 0.0 0.917083719679969 0.0 17 6.040598864971473E-5 0.0 0.0 0.9565288302682328 0.0 18 6.040598864971473E-5 0.0 0.0 1.0281099268181448 0.0 19 6.040598864971473E-5 0.0 0.0 1.0532992240850758 0.0 20 6.040598864971473E-5 0.0 0.0 1.0806631369433966 0.0 21 6.040598864971473E-5 0.0 0.0 1.1154569864056323 0.0 22 6.040598864971473E-5 0.0 0.0 1.1494051520267718 0.0 23 6.040598864971473E-5 0.0 0.0 1.193622335718363 0.0 24 6.040598864971473E-5 0.0 0.0 1.2247314198729662 0.0 25 6.040598864971473E-5 0.0 0.0 1.2507059949923436 0.0 26 6.040598864971473E-5 0.0 0.0 1.278130313839314 0.0 27 6.040598864971473E-5 0.0 0.0 1.304165294947341 0.0 28 6.040598864971473E-5 0.0 0.0 1.330623117975916 0.0 29 6.040598864971473E-5 0.0 0.0 1.3587723086866832 0.0 30 6.040598864971473E-5 0.0 0.0 1.4060097918107601 0.0 31 6.040598864971473E-5 0.0 0.0 1.4463609922287695 0.0 32 6.040598864971473E-5 0.0 0.0 1.4764431745763276 0.0 33 6.040598864971473E-5 0.0 0.0 1.5115994599704614 0.0 34 6.040598864971473E-5 0.0 0.0 1.5534608101047138 0.0 35 6.040598864971473E-5 0.0 0.0 1.6095779735602989 0.0 36 6.040598864971473E-5 0.0 0.0 1.6547616530702853 0.0 37 6.040598864971473E-5 0.0 0.0 1.6994620846710742 0.0 38 6.040598864971473E-5 0.0 0.0 1.7419879006804735 0.0 39 1.2081197729942946E-4 0.0 0.0 1.786748738269912 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 65 0.0 45.000004 1 GCGAATC 35 1.2123564E-7 45.000004 32 ATCGTAC 35 1.2123564E-7 45.000004 28 CGGTGTC 35 1.2123564E-7 45.000004 14 ACGTCGA 35 1.2123564E-7 45.000004 16 TATACGT 35 1.2123564E-7 45.000004 13 TATCGAC 35 1.2123564E-7 45.000004 23 ATCGACG 35 1.2123564E-7 45.000004 24 TCGCCTA 20 7.0341874E-4 45.0 33 CTTCGAA 25 3.8915525E-5 45.0 36 AGGTAGC 20 7.0341874E-4 45.0 45 TCCGCGT 25 3.8915525E-5 45.0 31 ACGCCCG 25 3.8915525E-5 45.0 40 GTCGACA 20 7.0341874E-4 45.0 28 CGACGTG 25 3.8915525E-5 45.0 42 ACGCATC 25 3.8915525E-5 45.0 29 CTATCGT 20 7.0341874E-4 45.0 13 ACGTTAG 80 0.0 45.0 1 CGGTTAC 25 3.8915525E-5 45.0 34 CCGCTAG 25 3.8915525E-5 45.0 1 >>END_MODULE