##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545430_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 974319 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.007979932650393 31.0 31.0 33.0 30.0 34.0 2 31.29427425719913 31.0 31.0 34.0 30.0 34.0 3 31.388861348285314 31.0 31.0 34.0 30.0 34.0 4 35.21231034189008 37.0 35.0 37.0 33.0 37.0 5 35.07948423462952 37.0 35.0 37.0 32.0 37.0 6 35.138826195527336 37.0 35.0 37.0 32.0 37.0 7 35.606609334314534 37.0 35.0 37.0 35.0 37.0 8 35.54866835194633 37.0 35.0 37.0 35.0 37.0 9 37.2665266714495 39.0 37.0 39.0 34.0 39.0 10 36.67579714651978 39.0 35.0 39.0 32.0 39.0 11 36.32838628826904 38.0 35.0 39.0 32.0 39.0 12 35.35595426138667 37.0 35.0 39.0 30.0 39.0 13 34.81051380502689 37.0 34.0 39.0 27.0 39.0 14 35.73840908367794 37.0 34.0 40.0 29.0 41.0 15 36.154398097543 37.0 34.0 40.0 30.0 41.0 16 36.3012904397841 37.0 35.0 40.0 31.0 41.0 17 36.239903973955144 37.0 34.0 40.0 31.0 41.0 18 36.179331409938634 37.0 35.0 40.0 31.0 41.0 19 36.0848705608738 37.0 35.0 40.0 31.0 41.0 20 35.9299295200032 36.0 34.0 40.0 31.0 41.0 21 35.75904195648448 36.0 34.0 40.0 30.0 41.0 22 35.65550502453509 36.0 34.0 40.0 30.0 41.0 23 35.61934540946035 36.0 34.0 40.0 30.0 41.0 24 35.50581585702424 35.0 34.0 40.0 30.0 41.0 25 35.34891139349638 35.0 34.0 40.0 29.0 41.0 26 35.21164423561483 35.0 34.0 40.0 29.0 41.0 27 35.101763385503105 35.0 34.0 40.0 29.0 41.0 28 35.184897348814914 36.0 34.0 40.0 29.0 41.0 29 35.2833117284996 36.0 34.0 40.0 29.0 41.0 30 35.209388300956874 36.0 34.0 40.0 29.0 41.0 31 35.021065995839145 35.0 34.0 40.0 29.0 41.0 32 34.776041522335085 35.0 34.0 40.0 27.0 41.0 33 34.54216329559415 35.0 33.0 40.0 26.0 41.0 34 34.401951516905655 35.0 34.0 40.0 25.0 41.0 35 34.21636650829964 35.0 33.0 40.0 24.0 41.0 36 33.988298493614515 35.0 33.0 40.0 23.0 41.0 37 33.93520397323669 35.0 33.0 40.0 23.0 41.0 38 33.957110556193605 35.0 33.0 40.0 23.0 41.0 39 33.9220614603636 35.0 33.0 40.0 23.0 41.0 40 33.7070138219618 35.0 33.0 40.0 23.0 41.0 41 33.70323374582657 35.0 33.0 40.0 23.0 41.0 42 33.67881053330583 35.0 33.0 39.0 23.0 41.0 43 33.55943381992961 35.0 33.0 39.0 23.0 41.0 44 33.478620451823275 35.0 33.0 39.0 23.0 41.0 45 33.42527036832906 35.0 33.0 39.0 23.0 41.0 46 33.357556406064134 35.0 32.0 39.0 23.0 41.0 47 33.29403922124068 35.0 32.0 39.0 23.0 41.0 48 33.29744878217504 35.0 32.0 39.0 23.0 41.0 49 33.324390676975405 35.0 32.0 39.0 23.0 41.0 50 33.198546882489204 35.0 32.0 39.0 23.0 41.0 51 33.02849169522508 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 3.0 12 2.0 13 4.0 14 15.0 15 31.0 16 138.0 17 291.0 18 641.0 19 1381.0 20 2324.0 21 3505.0 22 5174.0 23 7493.0 24 10677.0 25 14702.0 26 18995.0 27 21985.0 28 24021.0 29 27206.0 30 32205.0 31 39447.0 32 49695.0 33 63995.0 34 107555.0 35 146873.0 36 68454.0 37 78835.0 38 105924.0 39 142688.0 40 59.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.38581922347814 23.294116198082968 28.842914897482242 16.47714968095665 2 30.878182607544346 26.854038564371628 29.64901638990926 12.618762438174766 3 29.190747588828707 25.17132479198291 32.50167552926711 13.13625208992127 4 26.2153360449709 27.460205538432486 31.725030508488494 14.599427908108126 5 22.843339809651663 31.168744528229457 31.927530921597548 14.060384740521329 6 21.363126450372004 39.93343042679041 28.542499940984424 10.160943181853172 7 84.866250170632 5.528168905666419 7.974287681960426 1.6312932417411545 8 87.04151309786631 3.81199586583039 7.405993314304658 1.7404977219986473 9 82.70381671711216 5.574047103669332 9.067358842432508 2.6547773367860015 10 53.04258666822673 21.623000269932128 14.784274965386079 10.550138096455063 11 48.3935959372649 19.79875174352548 20.00504968085401 11.80260263835561 12 42.98992424452361 21.395456724132444 23.96083828807608 11.653780743267863 13 21.24293994061493 42.535658239241975 23.20933903577781 13.012062784365286 14 15.0951587724349 44.476295751186214 26.99731812681473 13.431227349564157 15 13.728152689211646 22.433617737106633 49.86785642074105 13.970373152940669 16 14.758718653746875 17.54497243715867 48.504134682788695 19.19217422630576 17 15.869545805839772 18.25059349145403 29.621715269844884 36.25814543286131 18 21.14615439091304 22.73249315675872 36.60967301263754 19.511679439690695 19 30.48016101502691 22.737009131506213 26.792662362121643 19.990167491345236 20 32.412279756424745 22.088761483661923 25.698872751121556 19.80008600879178 21 22.189652464952445 28.30140847094227 28.53469962096603 20.974239443139258 22 22.627702015459004 26.18454530805619 24.796601523730935 26.39115115275387 23 19.07311671023556 30.664289621776852 25.47512672954135 24.787466938446236 24 19.52563790709203 23.47198402166026 41.40071167656589 15.601666394681823 25 16.56326110852811 25.754501349147457 37.98612158851464 19.69611595380979 26 15.614085325237422 35.28043690002966 28.5305941893774 20.574883585355515 27 16.93983182099497 35.373424925512076 28.90747280921341 18.779270444279543 28 14.531996194264918 29.746725661718592 38.895064142236784 16.826214001779704 29 14.781093255904892 24.24318934558394 38.97080935504696 22.004908043464205 30 16.861828620811046 32.01015273231867 32.492438308192696 18.635580338677578 31 29.02314334422299 27.773142061275617 25.222232143681893 17.981482450819495 32 31.020127904721146 25.72483960591962 27.226401209460143 16.028631279899088 33 28.590225583202216 27.265915988500687 25.334926240789724 18.808932187507377 34 19.125153055621414 27.006760619468572 29.098683285453735 24.769403039456275 35 20.20816590870136 25.438896295771713 31.816581632914886 22.53635616261204 36 30.561859103640593 25.727302864872797 25.796171479772024 17.914666551714582 37 20.14904769382512 34.76674477250264 28.441814231273334 16.642393302398904 38 19.64602968842853 34.415935643254414 25.458089188448547 20.4799454798685 39 20.503346439923682 34.19701350379085 26.77162202522993 18.528018031055538 40 24.178323526483624 26.93378657298072 25.728534494349386 23.15935540618627 41 16.982425673726983 25.752345997563424 27.616211938800333 29.64901638990926 42 20.600131989625574 26.462277755026843 24.767966138400258 28.169624116947322 43 21.62269236256298 26.587698690059412 26.592933115334915 25.196675832042686 44 19.17113388941404 30.545437377286085 29.101043908617196 21.182384824682675 45 16.54376030848213 39.02633531728315 22.749325426272094 21.68057894796263 46 20.274673900437126 34.90827952652057 26.2467425966239 18.5703039764184 47 21.562137246630726 28.34985256368807 27.427362085723466 22.66064810395774 48 22.3934871433278 24.69386309822553 31.776143131766904 21.13650662667976 49 20.61809325282582 25.25456241744234 33.189643227731366 20.937701102000474 50 18.56486427956347 35.154092242889654 27.319286599152843 18.961756878394038 51 18.02520529723838 34.67221721017449 24.89071854290022 22.41185894968691 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 702.0 1 1120.5 2 1539.0 3 5766.0 4 9993.0 5 7295.5 6 4598.0 7 4797.0 8 4996.0 9 5428.5 10 5861.0 11 5990.0 12 6119.0 13 5916.0 14 5713.0 15 5443.0 16 5173.0 17 4901.5 18 4630.0 19 4478.5 20 4327.0 21 4451.5 22 4576.0 23 4506.0 24 4436.0 25 5325.5 26 7091.0 27 7967.0 28 10154.0 29 12341.0 30 13686.0 31 15031.0 32 17819.0 33 20607.0 34 23766.0 35 26925.0 36 27443.5 37 27962.0 38 34867.5 39 41773.0 40 57417.0 41 73061.0 42 88109.5 43 103158.0 44 102767.0 45 102376.0 46 95314.0 47 88252.0 48 81077.5 49 73903.0 50 70291.0 51 66679.0 52 60547.0 53 54415.0 54 49887.5 55 45360.0 56 42204.0 57 39048.0 58 35695.5 59 32343.0 60 28932.0 61 25521.0 62 22552.0 63 19583.0 64 16035.0 65 12487.0 66 9805.5 67 7124.0 68 5559.5 69 3995.0 70 3265.0 71 2535.0 72 1922.0 73 1309.0 74 1073.0 75 602.5 76 368.0 77 305.0 78 242.0 79 186.5 80 131.0 81 89.0 82 47.0 83 40.5 84 34.0 85 24.5 86 15.0 87 11.0 88 7.0 89 4.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 974319.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.498521737108593 #Duplication Level Percentage of deduplicated Percentage of total 1 80.6635180035013 14.921558411794189 2 5.41515288527469 2.003446467160403 3 1.929305008276692 1.0706787189935658 4 1.0902827333506802 0.806744753699269 5 0.7000481082951769 0.6474927574160041 6 0.5709980171081361 0.6337571538792456 7 0.4543833852788348 0.588379465069306 8 0.3893061196384112 0.576127017321644 9 0.3491682924513104 0.5813187523037691 >10 5.121617964202227 23.13348027164668 >50 2.4065388867858184 31.85463569486513 >100 0.9063443589327362 21.906002152367897 >500 0.0016681184520234411 0.2236156503901837 >1k 0.0011120789680156274 0.43272816982129847 >5k 5.560394840078137E-4 0.6200345632714017 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6028 0.6186885404061709 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3203 0.3287424344593506 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1004 0.10304633287455135 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012624202135029699 0.0 2 0.0 0.0 0.0 0.04967572222239328 0.0 3 0.0 0.0 0.0 0.06907388647865843 0.0 4 0.0 0.0 0.0 0.10201997497739447 0.0 5 0.0 0.0 0.0 0.1656541646011214 0.0 6 0.0 0.0 0.0 0.26151599219557453 0.0 7 0.0 0.0 0.0 0.3186841270672131 0.0 8 0.0 0.0 0.0 0.4939860559016092 0.0 9 0.0 0.0 0.0 0.5722971634546796 0.0 10 0.0 0.0 0.0 0.6825280016093291 0.0 11 0.0 0.0 0.0 0.772231681820841 0.0 12 0.0 0.0 0.0 0.8577272946540097 0.0 13 1.026357897156886E-4 0.0 0.0 0.8929313705264909 0.0 14 1.026357897156886E-4 0.0 0.0 0.9086346463529912 0.0 15 1.026357897156886E-4 0.0 0.0 0.9309066127212956 0.0 16 1.026357897156886E-4 0.0 0.0 0.9772979896727868 0.0 17 1.026357897156886E-4 0.0 0.0 1.020097113984229 0.0 18 1.026357897156886E-4 0.0 0.0 1.094302789948672 0.0 19 1.026357897156886E-4 0.0 0.0 1.1260172489708196 0.0 20 1.026357897156886E-4 0.0 0.0 1.1580396153621144 0.0 21 1.026357897156886E-4 0.0 0.0 1.2024809123090077 0.0 22 1.026357897156886E-4 0.0 0.0 1.2449721292513027 0.0 23 1.026357897156886E-4 0.0 0.0 1.2964952956885785 0.0 24 1.026357897156886E-4 0.0 0.0 1.3431945800092167 0.0 25 1.026357897156886E-4 0.0 0.0 1.376038032718237 0.0 26 1.026357897156886E-4 0.0 0.0 1.4064182264740808 0.0 27 1.026357897156886E-4 0.0 0.0 1.441314394977415 0.0 28 1.026357897156886E-4 0.0 0.0 1.4775448287470532 0.0 29 1.026357897156886E-4 0.0 0.0 1.5148016204138481 0.0 30 1.026357897156886E-4 0.0 0.0 1.5741251068695161 0.0 31 1.026357897156886E-4 0.0 0.0 1.6253403659376446 0.0 32 1.026357897156886E-4 0.0 0.0 1.6675236755107927 0.0 33 1.026357897156886E-4 0.0 0.0 1.7138124166725681 0.0 34 1.026357897156886E-4 0.0 0.0 1.7611275157315007 0.0 35 1.026357897156886E-4 0.0 0.0 1.830919852738169 0.0 36 1.026357897156886E-4 0.0 0.0 1.8868563581332192 0.0 37 1.026357897156886E-4 0.0 0.0 1.9395085182573675 0.0 38 1.026357897156886E-4 0.0 0.0 1.9956502952318491 0.0 39 1.026357897156886E-4 0.0 0.0 2.0507657143091738 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGT 50 2.1827873E-11 45.000004 28 ACTCTCG 25 3.8903658E-5 45.000004 42 ACTTACG 25 3.8903658E-5 45.000004 10 TACGCTT 30 2.1651595E-6 45.000004 34 TACGCAT 25 3.8903658E-5 45.000004 25 GTCACGG 30 2.1651595E-6 45.000004 2 ACTACGC 30 2.1651595E-6 45.000004 32 CATACGC 25 3.8903658E-5 45.000004 23 GCGATCC 50 2.1827873E-11 45.000004 9 TTAACGG 90 0.0 45.000004 2 TCGTAGA 25 3.8903658E-5 45.000004 12 GTATAAC 25 3.8903658E-5 45.000004 9 ACGTAAG 25 3.8903658E-5 45.000004 1 TCATACG 30 2.1651595E-6 45.000004 1 TAGTGTA 30 2.1651595E-6 45.000004 22 TCGCGCG 30 2.1651595E-6 45.000004 1 GTACGCG 25 3.8903658E-5 45.000004 20 CTTACGA 25 3.8903658E-5 45.000004 11 TGATCGG 20 7.0327584E-4 45.0 2 GGTCGGA 20 7.0327584E-4 45.0 7 >>END_MODULE