SRR1545429_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545429_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1312101
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8605	0.6558184164176386	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3590	0.27360698604756795	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGACT	20	7.033652E-4	45.0	39
ACTCCGA	20	7.033652E-4	45.0	37
AGTACGG	85	0.0	42.352943	2
CGGTCTA	110	0.0	40.909092	31
ACGGTCT	110	0.0	40.909092	30
CGTTTTT	6500	0.0	40.880768	1
TCGTAAG	50	1.0822987E-9	40.499996	1
CATACGA	335	0.0	40.298504	18
AGGGCGA	1190	0.0	40.27311	6
CCAAGCG	510	0.0	39.264706	20
ACATACG	345	0.0	39.130436	17
CGTAAGG	180	0.0	38.75	2
TCCGTAG	35	6.248967E-6	38.571426	1
TCGCGCA	440	0.0	38.352272	34
TCTCGCG	455	0.0	38.076923	32
TACGGGT	95	0.0	37.894737	4
TGATTCG	95	0.0	37.894737	15
ACGTAGG	155	0.0	37.74194	2
CGACGTC	30	1.14001E-4	37.500004	18
ATCCCGT	30	1.14001E-4	37.500004	31