SRR1545426_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545426_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	942254
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3414	0.3623226858150775	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2836	0.3009804150473227	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1019	0.10814493756460572	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTAGCG	60	0.0	45.000004	1
TCGCACC	20	7.0326374E-4	45.000004	45
CACGGTT	20	7.0326374E-4	45.000004	25
CAACGCG	20	7.0326374E-4	45.000004	41
ATTACGC	20	7.0326374E-4	45.000004	23
ATCAAGT	30	2.165083E-6	45.000004	37
CGTTAGA	20	7.0326374E-4	45.000004	16
GAACGTA	20	7.0326374E-4	45.000004	11
CATACGT	20	7.0326374E-4	45.000004	23
GTATACG	55	1.8189894E-12	45.000004	1
CACAACG	30	2.165083E-6	45.000004	12
ATTGACG	20	7.0326374E-4	45.000004	1
GCGTATG	20	7.0326374E-4	45.000004	1
AATCGAT	20	7.0326374E-4	45.000004	16
CGCTTAA	20	7.0326374E-4	45.000004	27
CGTTGTA	25	3.890269E-5	45.0	13
TGATTCG	35	1.2116107E-7	45.0	15
ACTAAGC	25	3.890269E-5	45.0	24
CCTATGC	140	0.0	45.0	35
TATCGCG	25	3.890269E-5	45.0	1