SRR1545425_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545425_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2604341
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	10641	0.40858704754868885	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9209	0.3536019284725003	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCACGA	35	1.2127202E-7	45.000004	39
TATCGCC	35	1.2127202E-7	45.000004	41
TTCGAAC	35	1.2127202E-7	45.000004	17
TACCCGC	20	7.034933E-4	45.0	35
TACGCTA	20	7.034933E-4	45.0	15
TTACGAT	25	3.8921717E-5	45.0	39
GACGAAC	55	1.8189894E-12	45.0	12
ATCGACT	25	3.8921717E-5	45.0	12
TACGTCA	25	3.8921717E-5	45.0	34
CTAGACG	115	0.0	43.043476	1
GCTACGA	215	0.0	42.906975	10
TACGGGT	310	0.0	42.096775	4
CACGATA	60	3.6379788E-12	41.249996	30
AGGATCG	60	3.6379788E-12	41.249996	1
CGGGTCA	115	0.0	41.086956	6
TATACGA	55	6.184564E-11	40.909092	8
ATTGACG	165	0.0	40.90909	1
CGTTTTT	8395	0.0	40.65813	1
ACGGGAT	410	0.0	40.60976	5
CGCGAGG	275	0.0	40.090908	2