##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545425_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2604341 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.350245225183645 31.0 31.0 33.0 30.0 34.0 2 31.691104582694816 31.0 31.0 34.0 30.0 34.0 3 31.77431488426439 31.0 31.0 34.0 30.0 34.0 4 35.475351346079485 37.0 35.0 37.0 33.0 37.0 5 35.34000539867859 37.0 35.0 37.0 33.0 37.0 6 35.40832325720787 37.0 35.0 37.0 33.0 37.0 7 35.885278079944214 37.0 35.0 37.0 35.0 37.0 8 35.91896222499281 37.0 35.0 37.0 35.0 37.0 9 37.614868406249414 39.0 37.0 39.0 35.0 39.0 10 36.94967402502207 39.0 37.0 39.0 32.0 39.0 11 36.55845874253794 39.0 35.0 39.0 32.0 39.0 12 35.654874304094584 37.0 35.0 39.0 31.0 39.0 13 35.25028673280496 37.0 35.0 39.0 30.0 39.0 14 36.18342452082888 38.0 35.0 40.0 31.0 41.0 15 36.460812543365094 38.0 35.0 40.0 31.0 41.0 16 36.65418852600332 38.0 35.0 40.0 32.0 41.0 17 36.62882126418929 38.0 35.0 40.0 32.0 41.0 18 36.56454588704014 38.0 35.0 40.0 31.0 41.0 19 36.51247474889041 37.0 35.0 40.0 31.0 41.0 20 36.353088554839786 37.0 35.0 40.0 31.0 41.0 21 36.1554800235453 37.0 35.0 40.0 31.0 41.0 22 36.07257114179748 37.0 35.0 40.0 31.0 41.0 23 36.03238669590503 37.0 34.0 40.0 31.0 41.0 24 35.98624719266793 36.0 34.0 40.0 31.0 41.0 25 35.86789402770221 36.0 34.0 40.0 30.0 41.0 26 35.765497298548844 36.0 34.0 40.0 30.0 41.0 27 35.724794871332136 36.0 34.0 40.0 30.0 41.0 28 35.73872046709705 36.0 34.0 40.0 30.0 41.0 29 35.76249231571442 36.0 34.0 40.0 30.0 41.0 30 35.69240702350422 36.0 34.0 40.0 30.0 41.0 31 35.51925189520113 36.0 34.0 40.0 30.0 41.0 32 35.304717776973135 36.0 34.0 40.0 29.0 41.0 33 35.11645364412725 36.0 34.0 40.0 29.0 41.0 34 34.94192619169302 36.0 34.0 40.0 27.0 41.0 35 34.78321694432488 36.0 34.0 40.0 27.0 41.0 36 34.58947042649177 36.0 33.0 40.0 25.0 41.0 37 34.52624521904006 35.0 33.0 40.0 25.0 41.0 38 34.52215166907867 35.0 33.0 40.0 26.0 41.0 39 34.49729010141145 35.0 33.0 40.0 25.0 41.0 40 34.30674554522622 35.0 33.0 40.0 24.0 41.0 41 34.32390458853123 35.0 33.0 40.0 24.0 41.0 42 34.26473875732863 35.0 33.0 40.0 24.0 41.0 43 34.173134777665446 35.0 33.0 40.0 24.0 41.0 44 34.1144957591959 35.0 33.0 40.0 24.0 41.0 45 34.06202989547068 35.0 33.0 40.0 24.0 41.0 46 34.05592585609949 35.0 33.0 40.0 24.0 41.0 47 34.011864037773854 35.0 33.0 40.0 24.0 41.0 48 34.012115156962935 35.0 33.0 40.0 24.0 41.0 49 33.96414332838902 35.0 33.0 39.0 24.0 41.0 50 33.828057846495525 35.0 33.0 39.0 24.0 41.0 51 33.66035400126174 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 12.0 14 15.0 15 88.0 16 185.0 17 577.0 18 1323.0 19 2639.0 20 4635.0 21 7387.0 22 11297.0 23 16629.0 24 23347.0 25 33027.0 26 42682.0 27 49793.0 28 54602.0 29 63213.0 30 75421.0 31 92170.0 32 115963.0 33 150793.0 34 261411.0 35 417814.0 36 182585.0 37 210397.0 38 294521.0 39 491560.0 40 252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.6746539719645 24.48047317920349 29.773482044018046 14.071390804813962 2 30.568232040274296 25.098134230502072 31.08847881287435 13.24515491634928 3 27.95847394792003 25.454078402175444 32.54685158356759 14.040596066336935 4 25.015195782733517 28.711178758849165 31.247636158245022 15.02598930017229 5 22.175667472116746 33.237544545817926 30.574913193011206 14.01187478905412 6 21.295214413166324 40.32962657347866 27.86136684865768 10.513792164697326 7 86.07187000473441 4.922972836506433 7.1238750993053515 1.8812820594538118 8 87.44384855900206 3.6858460547217127 6.692249594043176 2.1780557922330446 9 82.98694372203947 5.392765386713952 8.464905325377899 3.1553855658686785 10 52.661767410642454 19.319743459093875 16.07270322895504 11.945785901308623 11 47.106465704759856 20.97701491471355 19.290100643502523 12.62641873702407 12 39.96200958323046 22.269817969305862 23.814584956424678 13.953587491038999 13 20.475659677438554 41.99595982246564 24.282035263431325 13.246345236664478 14 15.648373235302135 42.96534132819013 28.029969961690888 13.356315474816855 15 14.033454144445754 22.861483960817726 49.458538647588774 13.646523247147742 16 14.784469468475903 18.48732558447607 47.589812547588814 19.13839239945921 17 16.15030443401997 19.063747796467513 29.905031637562058 34.880916131950464 18 21.164739947648943 23.297832349911168 35.40154687884574 20.135880823594146 19 29.286986611968246 24.733781021763278 26.473338168849626 19.50589419741885 20 31.219222060398387 22.903836325581022 26.23968981020535 19.637251803815246 21 21.89432950600555 28.666061779160255 28.32977709140239 21.109831623431802 22 22.430664801575524 25.634354333783477 24.990621427839134 26.94435943680186 23 18.785788804154294 30.862586734993613 25.167211206213015 25.184413254639082 24 19.216915142832676 23.34932330290081 40.270916903738794 17.162844650527713 25 16.835276179271457 25.273802470567407 37.063810000303334 20.827111349857795 26 16.496418863735588 35.1132973754205 29.079486902828776 19.310796858015138 27 17.667348477023552 35.6850351010102 28.29521940483216 18.352397017134084 28 15.554798699555858 29.686742250726766 38.26538076235024 16.49307828736713 29 15.526154217132088 25.4536560304507 37.143523063992006 21.87666668842521 30 17.9673859913122 32.145444855339605 31.37899376464142 18.50817538870678 31 28.01756759195512 27.799393397408405 25.807795522936512 18.37524348769996 32 29.415272424002847 25.888698906940373 27.70819950229252 16.98782916676426 33 28.295526584268345 27.70105758040134 24.84098664499004 19.162429190340283 34 19.58602963283226 27.790638783477277 28.53501135220004 24.088320231490425 35 20.29292631034108 26.49150015301376 31.422882026585615 21.79269151005955 36 29.973647844118723 25.761948992086676 26.443656955828747 17.820746207965854 37 20.017655138094437 33.49073719608914 28.44312630335275 18.048481362463672 38 19.583648992201866 33.68483620232527 25.344760920324948 21.386753885147915 39 20.987881387268413 32.32994450419511 27.256607333678655 19.425566774857824 40 23.882126034954716 25.883937625679586 26.332496397361176 23.901439942004522 41 17.141303692565604 24.839258760661526 27.980091700741184 30.039345846031683 42 21.184591418712063 25.54358281039234 25.614925234445106 27.65690053645049 43 21.28784210669801 26.23250949088464 27.809607113661382 24.670041288755964 44 19.146187077652275 30.133189163784618 29.448371008251222 21.272252750311882 45 16.719047160106914 38.43636451601384 23.62651434662358 21.218073977255667 46 21.22847968065626 33.37197394657612 26.37949485109669 19.020051521670933 47 20.812213147203074 27.987540802068544 27.56797208967643 23.63227396105195 48 22.313552641531963 24.43397389205177 31.624660518726234 21.627812947690032 49 21.307923962338265 24.69557557938841 32.56063626076616 21.43586419750716 50 19.5085436200559 33.85140425159378 26.57213475501096 20.06791737333936 51 18.68745298714723 33.61717993150666 24.86083811605316 22.834528965292947 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1792.0 1 2632.5 2 3473.0 3 9967.0 4 16461.0 5 12613.0 6 8765.0 7 9635.0 8 10505.0 9 11527.0 10 12549.0 11 13131.0 12 13713.0 13 13873.0 14 14033.0 15 13653.5 16 13274.0 17 13415.0 18 13556.0 19 12223.0 20 10890.0 21 10702.5 22 10515.0 23 12206.0 24 13897.0 25 13888.5 26 15967.5 27 18055.0 28 22332.0 29 26609.0 30 34566.0 31 42523.0 32 47429.5 33 52336.0 34 62422.0 35 72508.0 36 77316.0 37 82124.0 38 99894.0 39 117664.0 40 161883.5 41 206103.0 42 244894.0 43 283685.0 44 285578.0 45 287471.0 46 275034.0 47 262597.0 48 240019.0 49 217441.0 50 200922.5 51 184404.0 52 165328.0 53 146252.0 54 128325.0 55 110398.0 56 99025.0 57 87652.0 58 79336.0 59 71020.0 60 63049.5 61 55079.0 62 47505.5 63 39932.0 64 33645.5 65 27359.0 66 23494.0 67 19629.0 68 15771.0 69 11913.0 70 10639.5 71 9366.0 72 7596.0 73 5826.0 74 4784.0 75 3223.5 76 2705.0 77 1962.5 78 1220.0 79 937.5 80 655.0 81 488.5 82 322.0 83 307.5 84 293.0 85 184.5 86 76.0 87 63.5 88 51.0 89 30.0 90 9.0 91 10.5 92 12.0 93 9.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2604341.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.122883789218506 #Duplication Level Percentage of deduplicated Percentage of total 1 79.53485608087605 13.618660978650594 2 8.063297406311518 2.7613380889235817 3 2.869747150135022 1.4741504086860888 4 1.4191420979627623 0.9719922089521648 5 0.8862464044384366 0.7587547095906046 6 0.5819973222672344 0.5979283508890924 7 0.4429912908562679 0.5309701875077438 8 0.3645650925471446 0.49939245706323565 9 0.2770598078600536 0.42696566033858135 >10 2.933974088158165 11.530113159949527 >50 1.0561389838496773 13.143926188151841 >100 1.5505235300323994 50.881107100147084 >500 0.018329306059648564 1.8979435607905586 >1k 6.788631873943912E-4 0.13762929032374627 >5k 2.2628772913146374E-4 0.35682098383766314 >10k+ 2.2628772913146374E-4 0.4123066661979122 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 10641 0.40858704754868885 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9209 0.3536019284725003 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04461781310511949 0.0 2 0.0 0.0 0.0 0.1481372830977203 0.0 3 0.0 0.0 0.0 0.216868681942956 0.0 4 0.0 0.0 0.0 0.3531795567477531 0.0 5 0.0 0.0 0.0 0.5831801595873966 0.0 6 0.0 0.0 0.0 0.9613564429542829 0.0 7 0.0 0.0 0.0 1.190205122908252 0.0 8 0.0 0.0 0.0 1.7862484213856789 0.0 9 0.0 0.0 0.0 2.066280874893111 0.0 10 0.0 0.0 0.0 2.4793220242664074 0.0 11 0.0 0.0 0.0 2.7847735761177206 0.0 12 0.0 0.0 0.0 3.0583552614653766 0.0 13 0.0 0.0 0.0 3.178884792736435 0.0 14 0.0 0.0 0.0 3.2272655539347572 0.0 15 3.839742952247805E-5 0.0 0.0 3.2822890704404686 0.0 16 3.839742952247805E-5 0.0 0.0 3.4061591780799825 0.0 17 3.839742952247805E-5 0.0 0.0 3.550111141359753 0.0 18 3.839742952247805E-5 0.0 0.0 3.7657511055579893 0.0 19 3.839742952247805E-5 0.0 0.0 3.8648548711555053 0.0 20 3.839742952247805E-5 0.0 0.0 3.969564661463303 0.0 21 3.839742952247805E-5 0.0 0.0 4.112095919850741 0.0 22 3.839742952247805E-5 0.0 0.0 4.256163075419079 0.0 23 3.839742952247805E-5 0.0 0.0 4.425649329331297 0.0 24 3.839742952247805E-5 0.0 0.0 4.558581230338116 0.0 25 3.839742952247805E-5 0.0 0.0 4.666554802155325 0.0 26 3.839742952247805E-5 0.0 0.0 4.772301323060229 0.0 27 3.839742952247805E-5 0.0 0.0 4.87209624238915 0.0 28 3.839742952247805E-5 0.0 0.0 4.9827960317024536 0.0 29 3.839742952247805E-5 0.0 0.0 5.103095178396377 0.0 30 3.839742952247805E-5 0.0 0.0 5.259103934546205 0.0 31 3.839742952247805E-5 0.0 0.0 5.40390064127547 0.0 32 3.839742952247805E-5 0.0 0.0 5.531994466162457 0.0 33 7.67948590449561E-5 0.0 0.0 5.655749381513404 0.0 34 7.67948590449561E-5 0.0 0.0 5.790946730862049 0.0 35 7.67948590449561E-5 0.0 0.0 5.9542509986211485 0.0 36 7.67948590449561E-5 0.0 0.0 6.09993084622943 0.0 37 7.67948590449561E-5 0.0 0.0 6.239159925677935 0.0 38 7.67948590449561E-5 0.0 0.0 6.387450798493745 0.0 39 7.67948590449561E-5 0.0 0.0 6.528407762270763 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCACGA 35 1.2127202E-7 45.000004 39 TATCGCC 35 1.2127202E-7 45.000004 41 TTCGAAC 35 1.2127202E-7 45.000004 17 TACCCGC 20 7.034933E-4 45.0 35 TACGCTA 20 7.034933E-4 45.0 15 TTACGAT 25 3.8921717E-5 45.0 39 GACGAAC 55 1.8189894E-12 45.0 12 ATCGACT 25 3.8921717E-5 45.0 12 TACGTCA 25 3.8921717E-5 45.0 34 CTAGACG 115 0.0 43.043476 1 GCTACGA 215 0.0 42.906975 10 TACGGGT 310 0.0 42.096775 4 CACGATA 60 3.6379788E-12 41.249996 30 AGGATCG 60 3.6379788E-12 41.249996 1 CGGGTCA 115 0.0 41.086956 6 TATACGA 55 6.184564E-11 40.909092 8 ATTGACG 165 0.0 40.90909 1 CGTTTTT 8395 0.0 40.65813 1 ACGGGAT 410 0.0 40.60976 5 CGCGAGG 275 0.0 40.090908 2 >>END_MODULE