##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545423_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5001419 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38501873168395 31.0 31.0 33.0 30.0 34.0 2 31.73075601144395 31.0 31.0 34.0 30.0 34.0 3 31.80573433259641 31.0 31.0 34.0 30.0 34.0 4 35.5024444062775 37.0 35.0 37.0 33.0 37.0 5 35.36647879331846 37.0 35.0 37.0 33.0 37.0 6 35.43108645766331 37.0 35.0 37.0 33.0 37.0 7 35.8927944249422 37.0 35.0 37.0 35.0 37.0 8 35.934789506737985 37.0 35.0 37.0 35.0 37.0 9 37.60020066305182 39.0 37.0 39.0 35.0 39.0 10 37.02151389435678 39.0 37.0 39.0 33.0 39.0 11 36.63167613031422 39.0 35.0 39.0 32.0 39.0 12 35.68591573711381 37.0 35.0 39.0 31.0 39.0 13 35.238047242192664 37.0 35.0 39.0 30.0 39.0 14 36.18477436103634 38.0 35.0 40.0 31.0 41.0 15 36.461822534764636 38.0 35.0 40.0 31.0 41.0 16 36.675039823698036 38.0 35.0 40.0 32.0 41.0 17 36.627887805440814 38.0 35.0 40.0 32.0 41.0 18 36.559244886301265 38.0 35.0 40.0 31.0 41.0 19 36.4692162364321 37.0 35.0 40.0 31.0 41.0 20 36.308440664539404 37.0 35.0 40.0 31.0 41.0 21 36.116510334367106 37.0 35.0 40.0 31.0 41.0 22 36.040296163948675 37.0 35.0 40.0 31.0 41.0 23 36.017171726663975 36.0 34.0 40.0 31.0 41.0 24 35.94500820667095 36.0 34.0 40.0 31.0 41.0 25 35.825314175836894 36.0 34.0 40.0 30.0 41.0 26 35.72623769374252 36.0 34.0 40.0 30.0 41.0 27 35.67490866092203 36.0 34.0 40.0 30.0 41.0 28 35.700424219606475 36.0 34.0 40.0 30.0 41.0 29 35.7297486973197 36.0 34.0 40.0 30.0 41.0 30 35.651000246130145 36.0 34.0 40.0 30.0 41.0 31 35.46041873316353 36.0 34.0 40.0 30.0 41.0 32 35.22266980630897 36.0 34.0 40.0 29.0 41.0 33 35.02683518417473 36.0 34.0 40.0 28.0 41.0 34 34.82460777631308 35.0 34.0 40.0 27.0 41.0 35 34.663455711269144 35.0 34.0 40.0 26.0 41.0 36 34.46735696409359 35.0 33.0 40.0 25.0 41.0 37 34.388215624405795 35.0 33.0 40.0 24.0 41.0 38 34.41805735532256 35.0 33.0 40.0 25.0 41.0 39 34.34349851512141 35.0 33.0 40.0 24.0 41.0 40 34.15533251663178 35.0 33.0 40.0 23.0 41.0 41 34.17175665546118 35.0 33.0 40.0 24.0 41.0 42 34.10115589195786 35.0 33.0 40.0 24.0 41.0 43 33.99796597725565 35.0 33.0 40.0 23.0 41.0 44 33.922256463615625 35.0 33.0 40.0 23.0 41.0 45 33.85307649689018 35.0 33.0 40.0 23.0 41.0 46 33.86067234118957 35.0 33.0 39.0 23.0 41.0 47 33.82943540623171 35.0 33.0 39.0 23.0 41.0 48 33.81430669975861 35.0 33.0 39.0 23.0 41.0 49 33.77653301992894 35.0 33.0 39.0 24.0 41.0 50 33.62725318554594 35.0 33.0 39.0 24.0 41.0 51 33.4539845591821 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 5.0 13 7.0 14 38.0 15 122.0 16 411.0 17 1220.0 18 2605.0 19 5296.0 20 9185.0 21 14973.0 22 22756.0 23 32471.0 24 46910.0 25 66077.0 26 85707.0 27 99628.0 28 108382.0 29 122412.0 30 145055.0 31 177294.0 32 222466.0 33 290985.0 34 509432.0 35 816067.0 36 341765.0 37 398529.0 38 555183.0 39 925761.0 40 673.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.371940443302194 24.556490867891693 30.04671274292356 15.024855945882559 2 30.215444856749656 26.75764618001411 29.955598601117 13.071310362119231 3 28.639232185905637 24.713026443095448 32.696360772812675 13.951380598186237 4 25.414707306066536 27.367992963596933 32.53712596365151 14.680173766685014 5 22.776915911264382 32.24940761811798 31.270325481628312 13.703350988989325 6 21.197524142648316 39.769753344000975 28.313844530922122 10.718877982428587 7 84.99969708596701 5.2036632003837315 7.947884390410001 1.8487553232392646 8 86.63575277336292 3.9712929470616243 7.2707365649628635 2.122217714612593 9 81.45606276938605 6.0773152579298 9.54769036547428 2.918931607209874 10 53.060841333229625 20.42246410468709 15.376916031230337 11.139778530852944 11 47.40138748623141 19.62990903181677 20.13412593505963 12.834577546892193 12 42.04792679837462 20.638962662396413 24.134630591838036 13.178479947390931 13 20.89063123885441 40.722742885569076 24.233962401470464 14.152663474106047 14 15.103073747670411 42.756085822843474 26.984821707599384 15.15601872188673 15 14.110835344929109 22.620920182852107 49.32782076446705 13.940423707751739 16 15.102493912227711 18.261937262204984 48.02846952035013 18.60709930521718 17 15.999079461248897 18.57024976311723 29.408193954555696 36.02247682107817 18 20.324112017009575 23.330078923601484 36.11281118418593 20.23299787520302 19 29.427628439049 23.52446375718571 26.862256491607685 20.18565131215761 20 31.83906407361591 21.533248863972403 25.736176073230414 20.89151098918127 21 21.442494620026835 28.03766291126578 29.096862310476286 21.422980158231095 22 21.38795009976169 25.379697241922745 24.974072358264724 28.25828030005085 23 19.240159642693403 29.732801830840405 25.490645754734807 25.536392771731382 24 19.72832110247112 22.96968120447417 40.47455332176728 16.827444371287427 25 16.70861809418487 24.35184894526933 37.80533084710559 21.134202113440207 26 16.4202599302318 34.15298738218094 28.94078660476157 20.485966082825694 27 17.319184815349402 35.36038472281567 28.618278132665946 18.70215232916898 28 14.891893680573453 29.675658048245907 38.533304248254346 16.899144022926293 29 15.046469811867391 23.946204067285702 38.28971337934294 22.717612741503963 30 17.72834869464046 31.28792048816546 32.44737143598647 18.53635938120761 31 28.509988865160068 27.170449026566263 25.840266532358118 18.479295575915554 32 29.41151301260702 25.71926087376403 28.109482528858308 16.759743584770643 33 29.39829676337855 27.70731666353089 24.615414145465518 18.27897242762504 34 20.13070690538025 27.869570615859217 28.009950775969777 23.989771702790748 35 20.464612143073797 25.7638482198752 31.36373897088006 22.407800666170942 36 30.205227756362746 25.568163755126292 26.404186491873606 17.822421996637356 37 19.89225457815072 33.93736857479847 29.69265322501474 16.477723622036066 38 21.069820384974744 33.09046892491911 24.41251172917126 21.427198960934888 39 20.8082546173396 32.900682786225275 27.552580577632067 18.73848201880306 40 24.248018412374567 26.518574028690654 26.502578568202345 22.73082899073243 41 16.833682600877868 25.66093742595851 27.394265507448985 30.11111446571463 42 21.086915533371627 25.66065750539997 25.275706754423094 27.97672020680531 43 22.130399392652365 25.531214241398292 26.33920493363983 25.99918143230951 44 18.994649318523404 30.176615876414274 29.302543938030386 21.526190867031936 45 16.53538725709644 38.2359486377766 23.809562846064285 21.41910125906268 46 21.384011217616443 33.7542605408585 25.999701284775377 18.862026956749673 47 21.652634982192055 28.016308971513887 26.51107615658676 23.8199798897073 48 23.283772065487813 23.96227950507646 31.54534743039925 21.208600999036474 49 21.538827280817703 24.202531321610927 33.095107608460715 21.16353378911065 50 19.951557747911142 33.71147268405227 26.967546610272002 19.369422957764588 51 19.157383134666382 33.32398265372287 24.500106869670386 23.018527341940356 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4169.0 1 7072.0 2 9975.0 3 26543.0 4 43111.0 5 31840.5 6 20570.0 7 21963.5 8 23357.0 9 25227.5 10 27098.0 11 28391.0 12 29684.0 13 29414.5 14 29145.0 15 28430.0 16 27715.0 17 26566.5 18 25418.0 19 25853.0 20 26288.0 21 24868.5 22 23449.0 23 23518.5 24 23588.0 25 27259.5 26 38963.5 27 46996.0 28 54750.5 29 62505.0 30 72490.0 31 82475.0 32 96499.5 33 110524.0 34 120620.0 35 130716.0 36 134786.5 37 138857.0 38 166497.5 39 194138.0 40 273016.5 41 351895.0 42 437984.0 43 524073.0 44 534703.5 45 545334.0 46 517140.0 47 488946.0 48 432001.0 49 375056.0 50 341432.0 51 307808.0 52 298472.0 53 289136.0 54 253596.5 55 218057.0 56 195913.5 57 173770.0 58 164205.0 59 154640.0 60 145708.0 61 136776.0 62 118705.0 63 100634.0 64 87747.0 65 74860.0 66 62632.0 67 50404.0 68 41642.0 69 32880.0 70 28875.0 71 24870.0 72 21433.5 73 17997.0 74 14654.0 75 8389.0 76 5467.0 77 4200.5 78 2934.0 79 2634.5 80 2335.0 81 1686.0 82 1037.0 83 651.5 84 266.0 85 191.5 86 117.0 87 88.0 88 59.0 89 37.0 90 15.0 91 15.5 92 16.0 93 12.0 94 8.0 95 8.0 96 8.0 97 4.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5001419.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.97662214969515 #Duplication Level Percentage of deduplicated Percentage of total 1 79.28653748136075 11.081579759346214 2 8.881140628597835 2.4825669364843606 3 3.2221472592570093 1.351042042599331 4 1.7029658329789168 0.9520683992554871 5 1.019185488057378 0.7122385233515307 6 0.6586633608198414 0.5523533350816348 7 0.4744945314510014 0.4642281544731102 8 0.36547239050210223 0.40864556065549745 9 0.2692455332360371 0.33868287751799503 >10 1.8908682639328087 5.58215423748076 >50 0.5493404379812475 5.630972094904273 >100 1.4545314574088488 48.469186803072404 >500 0.21253930826923123 18.348656116481703 >1k 0.012289687893118814 2.4858513932527337 >5k 2.8916912689691326E-4 0.2549041928453902 >10k+ 2.8916912689691326E-4 0.8848695731975541 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25750 0.5148538844675881 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 18038 0.36065764536024675 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 7537 0.15069723212552277 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5077 0.10151119112395902 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05120546788821333 0.0 2 0.0 0.0 0.0 0.17609002565072032 0.0 3 0.0 0.0 0.0 0.24569027310049407 0.0 4 0.0 0.0 0.0 0.3799521695742748 0.0 5 0.0 0.0 0.0 0.6006295413361687 0.0 6 0.0 0.0 0.0 0.8857686188659658 0.0 7 0.0 0.0 0.0 1.0644779011716474 0.0 8 0.0 0.0 0.0 1.5335447799914383 0.0 9 0.0 0.0 0.0 1.721331486124238 0.0 10 0.0 0.0 0.0 2.032083294760947 0.0 11 0.0 0.0 0.0 2.332178127847317 0.0 12 0.0 0.0 0.0 2.584666471655344 0.0 13 0.0 0.0 0.0 2.6828186160767573 0.0 14 0.0 0.0 0.0 2.719288265990112 0.0 15 0.0 0.0 0.0 2.773033013230845 0.0 16 0.0 0.0 0.0 2.8982974631799494 0.0 17 0.0 0.0 0.0 3.044435989066303 0.0 18 0.0 0.0 0.0 3.247978223780091 1.999432561039177E-5 19 0.0 0.0 0.0 3.3468901525746992 1.999432561039177E-5 20 3.998865122078354E-5 0.0 0.0 3.449201116723074 1.999432561039177E-5 21 3.998865122078354E-5 0.0 0.0 3.5862222301310887 1.999432561039177E-5 22 3.998865122078354E-5 0.0 0.0 3.72510281582087 1.999432561039177E-5 23 3.998865122078354E-5 0.0 0.0 3.8870768475906536 1.999432561039177E-5 24 3.998865122078354E-5 0.0 0.0 4.009602074931134 1.999432561039177E-5 25 3.998865122078354E-5 0.0 0.0 4.107074412281794 1.999432561039177E-5 26 3.998865122078354E-5 0.0 0.0 4.20840565447526 1.999432561039177E-5 27 3.998865122078354E-5 0.0 0.0 4.304478389033193 1.999432561039177E-5 28 3.998865122078354E-5 0.0 0.0 4.402650527780216 1.999432561039177E-5 29 3.998865122078354E-5 0.0 0.0 4.511959505892228 1.999432561039177E-5 30 3.998865122078354E-5 0.0 0.0 4.66265673801775 1.999432561039177E-5 31 3.998865122078354E-5 0.0 0.0 4.796758679886648 1.999432561039177E-5 32 3.998865122078354E-5 0.0 0.0 4.9196837937393365 1.999432561039177E-5 33 3.998865122078354E-5 0.0 0.0 5.038849974377272 3.998865122078354E-5 34 3.998865122078354E-5 0.0 0.0 5.16483422004835 3.998865122078354E-5 35 3.998865122078354E-5 0.0 0.0 5.334726004759849 3.998865122078354E-5 36 3.998865122078354E-5 0.0 0.0 5.468068162255552 3.998865122078354E-5 37 3.998865122078354E-5 0.0 0.0 5.6083683450636705 3.998865122078354E-5 38 5.998297683117531E-5 0.0 0.0 5.741350604698386 3.998865122078354E-5 39 5.998297683117531E-5 0.0 0.0 5.8761523479636475 3.998865122078354E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 130 0.0 45.000004 1 CGTGCTA 65 0.0 45.000004 19 TACGCCC 20 7.0355565E-4 45.000004 35 TACGATA 20 7.0355565E-4 45.000004 27 CGCTAAG 35 1.2130295E-7 45.000004 28 GTACGAC 35 1.2130295E-7 45.000004 34 CTTACCG 20 7.0355565E-4 45.000004 1 GGTACGA 25 3.8926883E-5 45.0 7 CGAATCG 25 3.8926883E-5 45.0 36 TATAGCG 600 0.0 42.750004 1 TATATCG 85 0.0 42.35294 1 AATACGG 455 0.0 42.032967 2 TACCTAG 150 0.0 42.000004 1 ACGTAAG 150 0.0 42.000004 1 GCGTAAT 75 0.0 42.000004 8 AGTAACG 290 0.0 41.896553 1 GCGAAGT 65 0.0 41.538464 28 ATGCGTC 60 3.6379788E-12 41.250004 43 CGTTTTT 19685 0.0 40.816612 1 CCACGTA 45 1.9304935E-8 40.0 11 >>END_MODULE