##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545422_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 9216950 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.194279344034634 31.0 31.0 33.0 30.0 34.0 2 31.56001074108029 31.0 31.0 34.0 30.0 34.0 3 31.590764515376563 31.0 31.0 34.0 30.0 34.0 4 35.364760359988935 37.0 35.0 37.0 33.0 37.0 5 35.2523982445386 37.0 35.0 37.0 32.0 37.0 6 35.32058153727643 37.0 35.0 37.0 32.0 37.0 7 35.7839149610229 37.0 35.0 37.0 35.0 37.0 8 35.8057972539723 37.0 35.0 37.0 35.0 37.0 9 37.45169432404429 39.0 37.0 39.0 35.0 39.0 10 36.82913404108734 39.0 37.0 39.0 32.0 39.0 11 36.51056303874926 39.0 35.0 39.0 32.0 39.0 12 36.08075805987881 38.0 35.0 39.0 31.0 39.0 13 35.88945800942828 38.0 35.0 39.0 31.0 39.0 14 36.93525656534971 39.0 35.0 41.0 31.0 41.0 15 37.05855852532562 39.0 35.0 41.0 31.0 41.0 16 37.15037230320225 39.0 35.0 41.0 32.0 41.0 17 37.066879065200524 39.0 35.0 41.0 32.0 41.0 18 36.87793239629161 38.0 35.0 40.0 31.0 41.0 19 36.72883253136884 38.0 35.0 40.0 31.0 41.0 20 36.47329496199936 38.0 35.0 40.0 31.0 41.0 21 36.2790060703378 38.0 35.0 40.0 30.0 41.0 22 36.25597665171234 38.0 35.0 40.0 30.0 41.0 23 36.14965243383115 38.0 35.0 40.0 30.0 41.0 24 36.0621491925203 38.0 35.0 40.0 30.0 41.0 25 35.94212554044451 37.0 34.0 40.0 30.0 41.0 26 35.86461692859351 37.0 34.0 40.0 30.0 41.0 27 35.82597204064251 37.0 34.0 40.0 30.0 41.0 28 35.74930199252464 37.0 34.0 40.0 29.0 41.0 29 35.69567297207862 37.0 34.0 40.0 29.0 41.0 30 35.54911841769783 37.0 34.0 40.0 29.0 41.0 31 35.32854414963735 37.0 34.0 40.0 27.0 41.0 32 35.02443020738965 37.0 34.0 40.0 26.0 41.0 33 34.67309370236358 37.0 33.0 40.0 24.0 41.0 34 34.2880366064696 37.0 33.0 40.0 23.0 41.0 35 34.01765128377609 37.0 33.0 40.0 21.0 41.0 36 33.83846619543341 37.0 33.0 40.0 21.0 41.0 37 33.75605357520655 37.0 33.0 40.0 20.0 41.0 38 33.66927302415658 36.0 33.0 40.0 19.0 41.0 39 33.533814222709246 36.0 33.0 40.0 18.0 41.0 40 33.37100797986319 36.0 32.0 40.0 18.0 41.0 41 33.250977384058714 36.0 32.0 40.0 18.0 41.0 42 33.12520389065797 36.0 32.0 40.0 18.0 41.0 43 33.02336206662725 35.0 32.0 40.0 18.0 41.0 44 32.92103287964023 35.0 32.0 40.0 17.0 41.0 45 32.876153608297756 35.0 31.0 40.0 18.0 41.0 46 32.83013947130016 35.0 31.0 40.0 18.0 41.0 47 32.779597155241156 35.0 31.0 40.0 18.0 41.0 48 32.719960182055885 35.0 31.0 39.0 18.0 41.0 49 32.64579389060373 35.0 31.0 39.0 18.0 41.0 50 32.52416450127211 35.0 31.0 39.0 18.0 41.0 51 32.37734402378227 35.0 31.0 39.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 4.0 12 13.0 13 31.0 14 108.0 15 420.0 16 1367.0 17 3550.0 18 8294.0 19 15371.0 20 26135.0 21 40598.0 22 59249.0 23 83777.0 24 117983.0 25 171111.0 26 227250.0 27 250888.0 28 250227.0 29 257965.0 30 285353.0 31 330632.0 32 393049.0 33 487165.0 34 728006.0 35 985849.0 36 727689.0 37 883525.0 38 1188670.0 39 1692058.0 40 609.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.32229208143692 22.210177987295147 26.641915167164843 19.82561476410309 2 35.06721854843522 23.699510141641213 27.4684467204444 13.764824589479167 3 26.523502894124412 24.09464085190871 36.10600035803601 13.275855895930865 4 23.736800134534743 26.218217523150283 35.05235462924286 14.992627713072112 5 21.62404049061783 30.002636446980834 34.59471951133509 13.778603551066244 6 20.502888699624062 38.395315153060395 30.922647947531452 10.179148199784095 7 79.79212212282805 4.412685324320952 12.910507271928347 2.884685280922648 8 80.19923076505786 3.8688720238256686 13.531352562398624 2.4005446487178514 9 75.21437134843956 5.511486988645919 15.513092725901737 3.761048937012786 10 42.312098904735294 23.925561058701632 21.426350365359472 12.335989671203599 11 33.08837522173821 23.70140881745046 28.315397175855356 14.894818784955977 12 28.66318033622836 20.89224743543146 32.56523036362354 17.879341864716636 13 21.576128762768594 28.062319964847372 32.026928647763086 18.334622624620945 14 18.309896440796575 29.31517475954627 33.5052593319916 18.869669467665553 15 17.595549503903136 21.93723520253446 42.31009173316553 18.157123560396876 16 20.19384937533566 20.13224548250777 39.89195992166606 19.78194522049051 17 19.6709323583181 20.373746195867394 33.308361225785106 26.646960220029403 18 22.624837934457712 21.752054638465 35.98977969935825 19.63332772771904 19 26.54342271575738 23.328074905473066 30.895307015878355 19.233195362891195 20 27.700171965780434 21.997135711922056 31.568816148509 18.73387617378851 21 24.339787022822083 24.804485214740236 32.24307390188728 18.6126538605504 22 24.77548429795106 22.292092286493904 30.695468674561543 22.236954740993493 23 21.61326686159738 26.37130504125551 30.712849695398152 21.30257840174895 24 20.337725603372046 23.486934398038397 37.6470415918498 18.528298406739758 25 19.818139406202704 24.369959693824963 34.86680517958761 20.945095720384728 26 19.53738492668399 26.305806150624665 32.710354292906004 21.446454629785343 27 19.180477272850563 26.029760387112873 33.29620970060595 21.493552639430614 28 18.84677686219411 24.446807241007058 36.25683116432226 20.449584732476577 29 19.146930383695256 23.09450523220805 35.98950845995692 21.769055924139764 30 19.945687022279603 25.862926456148728 33.42681689712975 20.764569624441926 31 24.2007388561292 24.652862389402134 30.765914971872476 20.380483782596194 32 24.733398792442184 24.018954209364267 30.50981072914576 20.737836269047786 33 24.96881289363618 24.85637873700085 28.745083785851065 21.4297245835119 34 20.405730746071097 26.43170463114154 30.60548229077949 22.557082332007877 35 21.611313937907877 26.37209706030737 30.42247164192059 21.594117359864164 36 24.68379453072871 27.182929277038497 27.609393562946526 20.523882629286263 37 20.9170495662882 29.5730691823217 28.478271011560224 21.031610239829877 38 21.992437845491185 29.194777014088174 27.410130249160513 21.402654891260124 39 21.203901507548593 28.319802103732794 28.70651354298331 21.769782845735303 40 24.39595527804751 24.677751316867294 29.115585958478675 21.81070744660652 41 20.78404461345673 24.31497404238929 29.77898328622809 25.121998057925886 42 22.34155550371869 23.9888249366656 28.185440953894727 25.48417860572098 43 22.009341484981473 24.86527538936416 29.14004090290172 23.985342222752646 44 21.479014207519842 26.365804306196733 29.199236189845884 22.95594529643754 45 19.795528889708635 29.251661341333087 27.278188554782222 23.674621214176057 46 21.124102875680133 28.188207595788196 28.3481303468067 22.339559181724976 47 21.04279615274033 27.145096805342334 29.219763587737805 22.592343454179527 48 21.683745707636472 25.788064381384295 30.783556382534353 21.744633528444876 49 22.39157204932217 25.300929266188927 30.119659974286506 22.1878387102024 50 20.896901903558117 28.756833876716264 29.086324651864224 21.259939567861387 51 20.446872338463372 27.919192357558632 27.916555910577795 23.717379393400204 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6076.0 1 10283.0 2 14490.0 3 104936.0 4 195382.0 5 137194.0 6 79006.0 7 80844.5 8 82683.0 9 85563.5 10 88444.0 11 90478.5 12 92513.0 13 90791.0 14 89069.0 15 85535.0 16 82001.0 17 77220.5 18 72440.0 19 69415.5 20 66391.0 21 62816.5 22 59242.0 23 61763.5 24 64285.0 25 66174.5 26 72626.0 27 77188.0 28 92983.5 29 108779.0 30 135550.0 31 162321.0 32 175115.0 33 187909.0 34 219389.5 35 250870.0 36 271499.0 37 292128.0 38 320795.0 39 349462.0 40 407996.0 41 466530.0 42 519004.5 43 571479.0 44 590167.0 45 608855.0 46 620063.5 47 631272.0 48 632864.5 49 634457.0 50 610417.5 51 586378.0 52 545197.0 53 504016.0 54 478050.0 55 452084.0 56 435826.5 57 419569.0 58 414396.5 59 409224.0 60 390380.5 61 371537.0 62 346008.5 63 320480.0 64 288531.0 65 256582.0 66 218159.5 67 179737.0 68 147987.5 69 116238.0 70 96457.5 71 76677.0 72 63911.5 73 51146.0 74 41196.5 75 25505.0 76 19763.0 77 15433.5 78 11104.0 79 8319.5 80 5535.0 81 3937.0 82 2339.0 83 1728.0 84 1117.0 85 789.0 86 461.0 87 353.0 88 245.0 89 152.0 90 59.0 91 51.5 92 44.0 93 31.0 94 18.0 95 13.0 96 8.0 97 6.0 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 9216950.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.09644379450651 #Duplication Level Percentage of deduplicated Percentage of total 1 81.9121270652518 14.823182035248045 2 7.275066175805628 2.633056523035639 3 2.3417346544895383 1.2713120866985415 4 1.1551295470096659 0.8361494769133674 5 0.7186434116799738 0.6502445053879523 6 0.5260107858317884 0.5711354772665495 7 0.4221119591805595 0.5347107741010014 8 0.33970239547965075 0.4917924245325378 9 0.2799178514565222 0.4558965899365778 >10 2.702170847112281 10.986459133653884 >50 0.933157028344873 12.343827936088333 >100 1.3619207601932688 48.128853557713605 >500 0.028276718957119876 3.081852237216247 >1k 0.003725435631000514 1.1206496405693915 >5k 1.2214543052423076E-4 0.1802800542114539 >10k+ 1.8321814578634615E-4 1.890597547426934 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 125319 1.359658021362815 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 32234 0.3497252344864624 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 13511 0.14658862204959341 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0849576052815736E-5 0.0 0.0 0.036270132744563005 0.0 2 1.0849576052815736E-5 0.0 0.0 0.10623904870917168 0.0 3 2.1699152105631472E-5 0.0 0.0 0.1663673991938765 0.0 4 2.1699152105631472E-5 0.0 0.0 0.26804962596086557 0.0 5 2.1699152105631472E-5 0.0 0.0 0.4749835900162201 0.0 6 2.1699152105631472E-5 1.0849576052815736E-5 0.0 0.8331389450957204 0.0 7 2.1699152105631472E-5 1.0849576052815736E-5 0.0 1.0861836073755418 0.0 8 2.1699152105631472E-5 1.0849576052815736E-5 0.0 1.6225215499704349 0.0 9 2.1699152105631472E-5 1.0849576052815736E-5 0.0 1.916870548283326 0.0 10 2.1699152105631472E-5 1.0849576052815736E-5 0.0 2.291983790733377 0.0 11 2.1699152105631472E-5 1.0849576052815736E-5 0.0 2.5593281942508095 0.0 12 2.1699152105631472E-5 1.0849576052815736E-5 0.0 2.7760050776015928 0.0 13 4.3398304211262945E-5 1.0849576052815736E-5 0.0 2.907035407591448 0.0 14 4.3398304211262945E-5 1.0849576052815736E-5 0.0 2.9586142921465344 0.0 15 4.3398304211262945E-5 1.0849576052815736E-5 0.0 3.032467356338051 0.0 16 4.3398304211262945E-5 1.0849576052815736E-5 0.0 3.121791915980883 0.0 17 5.424788026407868E-5 1.0849576052815736E-5 0.0 3.22323545207471 0.0 18 7.594703236971015E-5 1.0849576052815736E-5 0.0 3.374044559208849 0.0 19 8.679660842252589E-5 1.0849576052815736E-5 0.0 3.450338778012249 0.0 20 9.764618447534163E-5 1.0849576052815736E-5 0.0 3.5345097890299937 0.0 21 1.0849576052815736E-4 1.0849576052815736E-5 0.0 3.634076348466684 0.0 22 1.193453365809731E-4 1.0849576052815736E-5 0.0 3.7443080411632916 0.0 23 1.3019491263378883E-4 1.0849576052815736E-5 0.0 3.8771394007779145 0.0 24 1.4104448868660458E-4 1.0849576052815736E-5 0.0 3.9831831571181358 0.0 25 1.4104448868660458E-4 1.0849576052815736E-5 0.0 4.0976895827795525 0.0 26 1.518940647394203E-4 1.0849576052815736E-5 0.0 4.188435436885304 0.0 27 1.7359321684505178E-4 1.0849576052815736E-5 0.0 4.283618767596656 0.0 28 1.8444279289786753E-4 1.0849576052815736E-5 0.0 4.376794926738238 0.0 29 1.8444279289786753E-4 1.0849576052815736E-5 0.0 4.483500507217681 0.0 30 2.1699152105631472E-4 1.0849576052815736E-5 0.0 4.625619103933514 0.0 31 2.2784109710913047E-4 1.0849576052815736E-5 0.0 4.738823580468593 0.0 32 2.386906731619462E-4 1.0849576052815736E-5 0.0 4.8741286434232585 0.0 33 2.386906731619462E-4 1.0849576052815736E-5 0.0 4.9886567682367815 0.0 34 2.495402492147619E-4 1.0849576052815736E-5 0.0 5.1318928712860545 0.0 35 2.495402492147619E-4 1.0849576052815736E-5 0.0 5.278893777225655 0.0 36 2.712394013203934E-4 1.0849576052815736E-5 0.0 5.401591632806948 0.0 37 2.8208897737320917E-4 1.0849576052815736E-5 0.0 5.537916555910578 0.0 38 3.037881294788406E-4 1.0849576052815736E-5 0.0 5.687868546536544 0.0 39 3.1463770553165636E-4 1.0849576052815736E-5 0.0 5.893326968248716 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 84610 0.0 43.263504 1 CTTGACC 6270 0.0 39.581337 7 CGTAAGG 1745 0.0 39.19771 2 TCGTAAG 590 0.0 38.898304 1 TGCATTA 5870 0.0 38.752132 15 TCAACTT 6505 0.0 38.28978 3 CATTAGA 5960 0.0 38.2802 17 GTTTTTT 100970 0.0 37.69981 2 GCATTAG 6085 0.0 37.641743 16 CTCAACT 6710 0.0 37.488823 2 GCTCAAC 6890 0.0 37.195213 1 ACTTGAC 6680 0.0 37.151947 6 GCTACGA 1315 0.0 36.958176 10 GGGCGAT 17290 0.0 36.95778 7 TAGGGAC 6270 0.0 36.854065 5 TGATTCG 990 0.0 36.81818 15 CGAATAT 1315 0.0 36.787075 14 TAGCGGG 4940 0.0 36.52834 3 TTGACCC 6540 0.0 36.467888 8 AGGGCGA 9080 0.0 36.054516 6 >>END_MODULE