##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545420_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 449307 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.211325441179415 31.0 31.0 33.0 30.0 34.0 2 31.58125958420412 31.0 31.0 34.0 30.0 34.0 3 31.5903380094234 31.0 31.0 34.0 30.0 34.0 4 35.38327023616369 37.0 35.0 37.0 33.0 37.0 5 35.28453596316105 37.0 35.0 37.0 33.0 37.0 6 35.3476820970962 37.0 35.0 37.0 33.0 37.0 7 35.787673016445325 37.0 35.0 37.0 35.0 37.0 8 35.796693574771815 37.0 35.0 37.0 35.0 37.0 9 37.44360537449895 39.0 37.0 39.0 35.0 39.0 10 36.861902885999996 39.0 37.0 39.0 32.0 39.0 11 36.55658825702693 39.0 35.0 39.0 32.0 39.0 12 36.19413897401999 38.0 35.0 39.0 32.0 39.0 13 36.042196093094475 38.0 35.0 39.0 31.0 39.0 14 37.12791921781766 39.0 35.0 41.0 31.0 41.0 15 37.223887008214874 39.0 35.0 41.0 32.0 41.0 16 37.28839523978037 39.0 35.0 41.0 32.0 41.0 17 37.21091592163042 39.0 35.0 41.0 32.0 41.0 18 36.99951258271071 39.0 35.0 40.0 31.0 41.0 19 36.83051232230969 38.0 35.0 40.0 31.0 41.0 20 36.61827659039365 38.0 35.0 40.0 31.0 41.0 21 36.449888383666405 38.0 35.0 40.0 31.0 41.0 22 36.412882505725484 38.0 35.0 40.0 31.0 41.0 23 36.29780751245807 38.0 35.0 40.0 30.0 41.0 24 36.185067225749876 38.0 35.0 40.0 30.0 41.0 25 36.059829915848184 38.0 35.0 40.0 30.0 41.0 26 35.96268253109789 38.0 35.0 40.0 30.0 41.0 27 35.906569450286774 38.0 35.0 40.0 30.0 41.0 28 35.82212829980392 38.0 35.0 40.0 30.0 41.0 29 35.736859207624185 37.0 34.0 40.0 29.0 41.0 30 35.585341425795725 37.0 34.0 40.0 29.0 41.0 31 35.359315568197246 37.0 34.0 40.0 27.0 41.0 32 35.040945277950264 37.0 34.0 40.0 25.0 41.0 33 34.65908832936055 37.0 33.0 40.0 24.0 41.0 34 34.25582953303643 37.0 33.0 40.0 22.0 41.0 35 33.95191261208928 37.0 33.0 40.0 20.0 41.0 36 33.76509157435785 37.0 33.0 40.0 19.0 41.0 37 33.66943760057155 37.0 33.0 40.0 18.0 41.0 38 33.60519644697278 37.0 33.0 40.0 18.0 41.0 39 33.47901991288807 36.0 33.0 40.0 18.0 41.0 40 33.345498734718134 36.0 32.0 40.0 18.0 41.0 41 33.23288531004413 36.0 32.0 40.0 18.0 41.0 42 33.09813112192777 36.0 32.0 40.0 17.0 41.0 43 32.99754733400548 36.0 32.0 40.0 16.0 41.0 44 32.88111692005689 35.0 31.0 40.0 15.0 41.0 45 32.857858880453676 35.0 31.0 40.0 17.0 41.0 46 32.80308118947624 35.0 31.0 40.0 17.0 41.0 47 32.72996637043269 35.0 31.0 40.0 17.0 41.0 48 32.66160553919703 35.0 31.0 40.0 17.0 41.0 49 32.57448248079821 35.0 31.0 39.0 15.0 41.0 50 32.46249001239687 35.0 31.0 39.0 15.0 41.0 51 32.30745792965612 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 3.0 15 21.0 16 71.0 17 181.0 18 372.0 19 750.0 20 1240.0 21 1932.0 22 2944.0 23 4158.0 24 5960.0 25 8430.0 26 11362.0 27 12514.0 28 12506.0 29 12607.0 30 13662.0 31 15696.0 32 18561.0 33 22847.0 34 34044.0 35 44898.0 36 36323.0 37 43802.0 38 59018.0 39 85375.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.646290843454477 21.706761746422824 25.804405451061303 20.8425419590614 2 37.50353321893493 23.234447716149536 26.630789193135207 12.63122987178032 3 26.95195044813457 23.620152813109968 36.111389317326456 13.316507421429 4 24.131161989463774 25.920584366591214 35.564547180435646 14.38370646350936 5 21.71165817581297 29.63875479349309 34.51604359602677 14.133543434667164 6 20.303267031228092 37.64797788594436 32.128366573411945 9.920388509415611 7 79.3510895668218 4.386087908712751 14.037395366642407 2.225427157823048 8 79.46682335240716 4.0549112299608066 14.238816666555385 2.239448751076658 9 74.45710839136716 5.803159087216535 16.076758207639767 3.6629743137765494 10 39.98557778979628 24.055712463861013 22.97048565902601 12.988224087316691 11 31.136839621906624 23.74234098289143 29.287102137291427 15.833717257910514 12 27.772770065901486 21.398064129871113 34.19109873649865 16.638067067728745 13 21.72812798376166 27.2061196464778 33.92023716523446 17.14551520452608 14 18.65984727591602 28.76385188746225 35.252511089299745 17.32378974732199 15 17.975682551128738 22.65355313849996 41.866696935502894 17.50406737486841 16 19.87571971947911 21.12809281849604 39.45075416140857 19.54543330061628 17 20.201777403868622 21.35622191508256 34.226041437146534 24.215959243902276 18 21.711213045868416 22.31236103599543 36.422980278517805 19.553445639618346 19 25.501049393844298 23.563621310150964 31.4426438938187 19.492685402186034 20 26.85758289988805 22.441226154945284 32.127253748550544 18.57393719661612 21 23.45278395395576 24.502845493170593 32.648946043573766 19.39542450929988 22 23.238676450622847 23.04326440496142 31.865739906122094 21.85231923829364 23 21.328401293547618 25.033662952057277 32.15195846047357 21.48597729392153 24 20.542746941400868 22.52824905910658 37.682698021619956 19.24630597787259 25 20.838313224588088 24.293411854255552 34.5874869521285 20.28078796902786 26 19.71881141402204 26.69555560006855 32.69501699283563 20.890615993073776 27 19.58594012557116 26.243526141368818 33.07738361521187 21.093150117848154 28 19.024631265482174 25.224401133300837 35.891272559742006 19.859695041474982 29 19.88039358389698 23.227103072064313 35.319058016011326 21.573445328027386 30 20.445486048514713 25.411578274987928 34.1274451544267 20.015490522070657 31 23.954000271529267 25.08574315557069 31.487602018219167 19.472654554680876 32 25.088413935238048 24.13338763918657 30.665001880674016 20.11319654490137 33 24.529998419788697 25.546007518244764 29.515676363822507 20.408317698144028 34 21.27498570020053 26.162067361514513 30.955449169498806 21.607497768786153 35 22.01924296750329 26.517503622244927 30.746683225500604 20.716570184751184 36 24.687574420162605 27.33031090100978 27.723138077083153 20.258976601744465 37 22.031929170923224 29.276641583594294 29.193847413906305 19.497581831576184 38 22.06709443654339 28.63565446342924 28.39239094872771 20.90486015129967 39 21.82672426648149 29.232128589138384 28.216119490682317 20.725027653697804 40 23.93374685905183 26.512607192854777 28.55864698302052 20.994998965072877 41 20.531396127814613 26.194116717522764 29.474056714006235 23.80043044065639 42 21.83228839078848 27.040753872074102 27.931904021081355 23.195053716056062 43 21.944461136817363 26.294938649965395 29.273080544037818 22.487519669179427 44 21.61818088745557 27.460511409793302 29.252827131560384 21.668480571190745 45 20.240503709045264 29.88780499747389 27.975526755648144 21.896164537832707 46 21.191301270623427 29.0634243401505 28.29468492589699 21.45058946332908 47 21.45281511305188 27.558662562568575 29.452913041639682 21.535609282739866 48 21.726124899011143 26.150048853011416 30.53836241144696 21.58546383653048 49 21.407189293734575 26.43426432261238 30.3019984108861 21.856547972766947 50 20.135675607101604 29.12329431769369 29.81012982214833 20.93090025305637 51 20.315730669675744 28.65034375159969 28.98040760549023 22.053517973234335 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 301.0 1 566.5 2 832.0 3 5706.5 4 10581.0 5 7546.0 6 4511.0 7 4681.5 8 4852.0 9 4980.0 10 5108.0 11 5113.5 12 5119.0 13 5084.0 14 5049.0 15 4757.0 16 4465.0 17 4198.5 18 3932.0 19 3791.0 20 3650.0 21 3506.0 22 3362.0 23 3410.5 24 3459.0 25 3809.0 26 4361.0 27 4563.0 28 4920.5 29 5278.0 30 6203.5 31 7129.0 32 8327.0 33 9525.0 34 10944.0 35 12363.0 36 13708.0 37 15053.0 38 16279.0 39 17505.0 40 20059.5 41 22614.0 42 24660.5 43 26707.0 44 27628.0 45 28549.0 46 28417.0 47 28285.0 48 28169.5 49 28054.0 50 28102.0 51 28150.0 52 26746.0 53 25342.0 54 24015.0 55 22688.0 56 21963.0 57 21238.0 58 19999.0 59 18760.0 60 17780.0 61 16800.0 62 15565.5 63 14331.0 64 12980.5 65 11630.0 66 10054.0 67 8478.0 68 7248.0 69 6018.0 70 5121.0 71 4224.0 72 3600.5 73 2977.0 74 2299.0 75 1296.5 76 972.0 77 798.0 78 624.0 79 410.5 80 197.0 81 164.5 82 132.0 83 107.0 84 82.0 85 49.5 86 17.0 87 13.0 88 9.0 89 6.5 90 4.0 91 3.0 92 2.0 93 2.5 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 449307.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.54799096446399 #Duplication Level Percentage of deduplicated Percentage of total 1 68.50490429448838 26.407264317654082 2 8.38479129134183 6.464337178751226 3 4.812609044176938 5.56549229851291 4 3.4566690020117563 5.329905818267678 5 2.6946724186510442 5.19371040231754 6 2.166519547213693 5.010898555819684 7 1.8996262811650577 5.125874370554629 8 1.4453814226433863 4.457324001620909 9 1.22284939292844 4.2424548614555215 >10 5.386381851911474 29.647530364088322 >50 0.01745144554632914 0.45453324031161724 >100 0.006980578218531605 0.4982599210520018 >500 5.817148515443003E-4 0.11615600319754137 >1k 0.0 0.0 >5k 5.817148515443003E-4 1.4862586663963402 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6628 1.4751606362687428 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 518 0.11528865564079795 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 455 0.10126706238718738 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.021588802311114673 0.0 2 0.0 0.0 0.0 0.06276332218282822 0.0 3 0.0 0.0 0.0 0.11083735619520729 0.0 4 0.0 0.0 0.0 0.17849710776818523 0.0 5 0.0 0.0 0.0 0.3374084979757716 0.0 6 0.0 0.0 0.0 0.6423225099987314 0.0 7 0.0 0.0 0.0 0.8366217307987635 0.0 8 0.0 0.0 0.0 1.188274387000425 0.0 9 0.0 0.0 0.0 1.3825736078004571 0.0 10 0.0 0.0 0.0 1.6385233259219198 0.0 11 2.225649722795327E-4 0.0 0.0 1.8034439703810534 0.0 12 2.225649722795327E-4 0.0 0.0 1.9418793831389227 0.0 13 2.225649722795327E-4 0.0 0.0 2.015103259018889 0.0 14 2.225649722795327E-4 0.0 0.0 2.0565003438628824 0.0 15 2.225649722795327E-4 0.0 0.0 2.0950040840672415 0.0 16 2.225649722795327E-4 0.0 0.0 2.1522032819430814 0.0 17 2.225649722795327E-4 0.0 0.0 2.2163019939595867 0.0 18 2.225649722795327E-4 0.0 0.0 2.301989508287207 0.0 19 2.225649722795327E-4 0.0 0.0 2.3478378925767904 0.0 20 2.225649722795327E-4 0.0 0.0 2.4039242655912325 0.0 21 2.225649722795327E-4 0.0 0.0 2.4693583674414152 0.0 22 2.225649722795327E-4 0.0 0.0 2.5434725032105 0.0 23 2.225649722795327E-4 0.0 0.0 2.6198122887023794 0.0 24 2.225649722795327E-4 0.0 0.0 2.685246390552562 0.0 25 2.225649722795327E-4 0.0 0.0 2.747119452846272 0.0 26 2.225649722795327E-4 0.0 0.0 2.8052089106112303 0.0 27 2.225649722795327E-4 0.0 0.0 2.8713107073782513 0.0 28 2.225649722795327E-4 0.0 0.0 2.9318483798382844 0.0 29 2.225649722795327E-4 0.0 0.0 3.006185080579648 0.0 30 2.225649722795327E-4 0.0 0.0 3.0981044141310954 0.0 31 2.225649722795327E-4 0.0 0.0 3.1800083239299632 0.0 32 2.225649722795327E-4 0.0 0.0 3.2594640190337563 0.0 33 2.225649722795327E-4 0.0 0.0 3.339364844082109 0.0 34 4.451299445590654E-4 0.0 0.0 3.4408544714415754 0.0 35 4.451299445590654E-4 0.0 0.0 3.5327738049930226 0.0 36 4.451299445590654E-4 0.0 0.0 3.621799793904836 0.0 37 4.451299445590654E-4 0.0 0.0 3.711716042705767 0.0 38 4.451299445590654E-4 0.0 0.0 3.8094220655364817 0.0 39 4.451299445590654E-4 0.0 0.0 3.9429610489042015 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 35 1.2097189E-7 45.000004 4 AGATACG 20 7.0286955E-4 45.0 1 TACGCGG 20 7.0286955E-4 45.0 2 ACTCGAA 20 7.0286955E-4 45.0 45 ATACGAG 20 7.0286955E-4 45.0 1 ATTGCGA 20 7.0286955E-4 45.0 12 CGTTTTT 4525 0.0 43.508286 1 ACGGGTC 50 1.0786607E-9 40.5 5 CATAGTT 130 0.0 39.80769 36 CATACGA 130 0.0 39.80769 18 AGGGTAT 245 0.0 39.489796 6 CGGGTAT 40 3.4519508E-7 39.375 6 GCCGATA 40 3.4519508E-7 39.375 9 AGCTACG 75 0.0 39.000004 9 TCACGGG 70 0.0 38.57143 3 ATGATCG 70 0.0 38.57143 27 CATGAGG 105 0.0 38.57143 2 TTGTCGC 70 0.0 38.57143 38 ACGAATG 35 6.2397958E-6 38.57143 1 GGCGATA 205 0.0 38.414635 8 >>END_MODULE