##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545419_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4552872 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.276672614560656 31.0 31.0 33.0 30.0 34.0 2 31.64381537631631 31.0 31.0 34.0 30.0 34.0 3 31.682408378711283 31.0 31.0 34.0 30.0 34.0 4 35.44796932573549 37.0 35.0 37.0 33.0 37.0 5 35.3418255553857 37.0 35.0 37.0 33.0 37.0 6 35.40600548401097 37.0 35.0 37.0 33.0 37.0 7 35.83075188584261 37.0 35.0 37.0 35.0 37.0 8 35.849761205674135 37.0 35.0 37.0 35.0 37.0 9 37.509938122574056 39.0 37.0 39.0 35.0 39.0 10 36.910242150449214 39.0 37.0 39.0 32.0 39.0 11 36.5873215851445 39.0 35.0 39.0 32.0 39.0 12 36.127173353434934 38.0 35.0 39.0 32.0 39.0 13 35.91895049981638 38.0 35.0 39.0 31.0 39.0 14 36.96486195965975 39.0 35.0 41.0 31.0 41.0 15 37.10404443612735 39.0 35.0 41.0 32.0 41.0 16 37.200336403044055 39.0 35.0 41.0 32.0 41.0 17 37.13854903015064 39.0 35.0 41.0 32.0 41.0 18 36.96905952989673 39.0 35.0 40.0 32.0 41.0 19 36.84174933975741 38.0 35.0 40.0 31.0 41.0 20 36.63592936502498 38.0 35.0 40.0 31.0 41.0 21 36.456828568868175 38.0 35.0 40.0 31.0 41.0 22 36.41527919080528 38.0 35.0 40.0 31.0 41.0 23 36.33866710946409 38.0 35.0 40.0 31.0 41.0 24 36.23245349309183 38.0 35.0 40.0 30.0 41.0 25 36.10648750942262 38.0 35.0 40.0 30.0 41.0 26 36.0176785114978 38.0 35.0 40.0 30.0 41.0 27 35.96865429118148 38.0 35.0 40.0 30.0 41.0 28 35.913531722394126 38.0 35.0 40.0 30.0 41.0 29 35.857149509144996 38.0 35.0 40.0 30.0 41.0 30 35.69956546109796 37.0 34.0 40.0 29.0 41.0 31 35.48197533337199 37.0 34.0 40.0 29.0 41.0 32 35.188890880305884 37.0 34.0 40.0 27.0 41.0 33 34.85550395442701 37.0 34.0 40.0 25.0 41.0 34 34.51594136624092 37.0 33.0 40.0 23.0 41.0 35 34.273372280178314 37.0 33.0 40.0 23.0 41.0 36 34.097304294959315 37.0 33.0 40.0 21.0 41.0 37 34.02060633376032 37.0 33.0 40.0 21.0 41.0 38 33.95048026827901 37.0 33.0 40.0 21.0 41.0 39 33.84454581635504 36.0 33.0 40.0 21.0 41.0 40 33.69702332945007 36.0 33.0 40.0 20.0 41.0 41 33.616687664401724 36.0 33.0 40.0 19.0 41.0 42 33.51505049999209 36.0 33.0 40.0 18.0 41.0 43 33.41626208687615 36.0 32.0 40.0 18.0 41.0 44 33.32821304881842 36.0 32.0 40.0 18.0 41.0 45 33.30677888594276 35.0 32.0 40.0 18.0 41.0 46 33.25918628944543 35.0 32.0 40.0 18.0 41.0 47 33.19465251823464 35.0 32.0 40.0 18.0 41.0 48 33.13551182638124 35.0 32.0 40.0 18.0 41.0 49 33.05234673849825 35.0 32.0 40.0 18.0 41.0 50 32.9430682435175 35.0 32.0 39.0 18.0 41.0 51 32.789668587212645 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 11.0 13 26.0 14 54.0 15 198.0 16 587.0 17 1621.0 18 3584.0 19 7056.0 20 11786.0 21 18359.0 22 27678.0 23 39200.0 24 55462.0 25 80256.0 26 103496.0 27 113093.0 28 112756.0 29 118333.0 30 131422.0 31 155107.0 32 186306.0 33 234579.0 34 361690.0 35 506515.0 36 348191.0 37 428789.0 38 592233.0 39 914172.0 40 310.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.59970849169491 22.387692867271472 26.53287858740593 18.479720053627688 2 35.76603954602721 24.107332690222787 27.102958308513834 13.023669455236167 3 27.606486630856303 24.28570361740897 34.71211138815236 13.395698363582373 4 24.706317243269744 26.522972752144142 33.92388364970507 14.84682635488105 5 22.080480189208043 30.363888991388293 33.528177379025806 14.027453440377855 6 21.255286772832623 37.81384585378196 31.131053102305533 9.79981427107988 7 81.26048788544901 4.75664591493018 12.025486330386622 1.9573798692341888 8 81.87882286170137 3.9270377027950705 12.091774159255959 2.102365276247608 9 76.94793528129058 5.620144822872245 14.022225970771856 3.409693925065321 10 42.50018449892727 23.507711176593588 21.628435853237253 12.363668471241889 11 34.54641378013702 23.89920032893523 27.038273863179107 14.51611202774864 12 31.00757060598233 21.807092314477543 31.187720629967192 15.997616449572929 13 21.954647527977944 30.590888564405063 31.13902609166258 16.31543781595441 14 18.437153515407417 31.53134988200854 33.041517530033786 16.98997907255025 15 17.521577588827448 23.56462030999334 42.486610649278084 16.42719145190113 16 19.551439179489343 21.12470985347271 40.47412270760083 18.84972825943712 17 20.114600190824603 21.332051505071963 33.085819236736725 25.467529067366705 18 22.08041429673402 22.63492142981397 36.00507547763258 19.27958879581943 19 26.64711417320759 23.571802589662084 30.560753739617542 19.22032949751278 20 27.66594360658503 22.838287568813705 31.327149105004487 18.168619719596773 21 23.4030958919996 25.51993554837474 32.29251777778949 18.784450781836167 22 23.586584468001735 23.40035037224855 30.743627319195443 22.26943784055427 23 21.528850360827185 26.51734992769399 30.57786381870608 21.375935892772738 24 20.66120022702154 23.278888578462123 37.956722701626575 18.103188492889764 25 19.930474654240225 24.71993502123495 35.19877123714438 20.15081908738045 26 19.316620366221585 28.720530689200135 31.52414563818179 20.43870330639649 27 18.927547271260867 29.031345489176942 32.58808945210847 19.45301778745372 28 18.4025819307022 26.346710384126766 36.28026441331977 18.970443271851263 29 19.276052566380077 23.93300316811015 36.06668494084613 20.72425932466364 30 20.261716121164838 27.618149598758762 33.17637746020534 18.943756819871062 31 24.71073203902943 26.13925891173747 30.132167124399718 19.017841924833377 32 26.092233649441493 24.481953369213983 30.26726866030936 19.158544321035162 33 25.377871374376436 26.441903044935156 28.54415850039272 19.636067080295692 34 20.68105582586113 26.342207731735044 30.75201762755465 22.224718814849176 35 21.527532511346685 26.425407962270846 31.173927138737923 20.873132387644546 36 26.1526790122806 26.67795185105138 27.50973451482932 19.6596346218387 37 21.55276932889833 30.091379682978133 29.249383685726283 19.106467302397256 38 21.687585330753862 29.79868531335825 27.987279238247858 20.52645011764003 39 21.457291134035835 30.054853288210165 28.475256936720385 20.012598641033616 40 24.32082430606439 26.570151763546175 27.961317603481934 21.1477063269075 41 19.997333551217782 25.206572906068956 29.742193498960656 25.053900043752602 42 21.43108789353182 26.158257908414733 28.118580974822045 24.2920732232314 43 21.549584525987115 26.53582178457905 28.870875350767605 23.04371833866623 44 20.710070478590218 28.244018281207993 29.476449151217075 21.56946208898471 45 19.320749627927164 31.949283880592294 26.86032025499509 21.869646236485455 46 21.333303462078444 30.073676571623366 27.91097575332669 20.682044212971505 47 21.029517192664322 27.746464209843808 29.473989165520138 21.750029431971733 48 21.66034977482345 26.321166068363 31.142540356943925 20.87594379986962 49 21.351467820751385 26.30216707168574 30.933287823597936 21.413077283964935 50 20.201666113169885 29.889199608510847 29.295244847647815 20.613889430671453 51 19.74628322518182 30.569737080242977 27.850003250695387 21.83397644387982 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2781.0 1 5231.5 2 7682.0 3 43761.0 4 79840.0 5 57673.0 6 35506.0 7 35915.0 8 36324.0 9 37971.5 10 39619.0 11 40173.5 12 40728.0 13 40989.5 14 41251.0 15 39885.5 16 38520.0 17 36636.5 18 34753.0 19 33469.5 20 32186.0 21 33091.0 22 33996.0 23 34365.0 24 34734.0 25 36388.5 26 42905.5 27 47768.0 28 57243.0 29 66718.0 30 77312.5 31 87907.0 32 98229.0 33 108551.0 34 127916.5 35 147282.0 36 153141.5 37 159001.0 38 176482.0 39 193963.0 40 230893.5 41 267824.0 42 296446.5 43 325069.0 44 334892.0 45 344715.0 46 328552.0 47 312389.0 48 305613.0 49 298837.0 50 288606.0 51 278375.0 52 267064.0 53 255753.0 54 239995.0 55 224237.0 56 204186.5 57 184136.0 58 175134.0 59 166132.0 60 154466.5 61 142801.0 62 131543.5 63 120286.0 64 110799.5 65 101313.0 66 88157.5 67 75002.0 68 63937.0 69 52872.0 70 45235.0 71 37598.0 72 30601.5 73 23605.0 74 19596.5 75 12290.5 76 8993.0 77 7258.0 78 5523.0 79 4099.0 80 2675.0 81 1970.0 82 1265.0 83 836.5 84 408.0 85 301.5 86 195.0 87 128.5 88 62.0 89 44.0 90 26.0 91 19.5 92 13.0 93 9.5 94 6.0 95 8.0 96 10.0 97 9.5 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4552872.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.44319923694688 #Duplication Level Percentage of deduplicated Percentage of total 1 81.74032069387594 15.07553020249086 2 5.832207620125214 2.151291342584183 3 2.0833637033754853 1.1527167559313274 4 1.1883225159906683 0.8766587568066357 5 0.8276676928495295 0.7632420080604014 6 0.6120166971301566 0.6772527528905794 7 0.49497422137147146 0.6390235727334689 8 0.38911974290004536 0.5741290356268067 9 0.3461619564998891 0.5745900538780916 >10 3.606547502076294 15.892921555449155 >50 1.5143040432278412 20.346433535037484 >100 1.3602749637645095 39.32040260818934 >500 0.0033877464297382633 0.3895459869631231 >1k 0.001088918495272988 0.35843943338423134 >5k 1.2099094391922088E-4 0.15180622955319215 >10k+ 1.2099094391922088E-4 1.0560161704211768 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 47324 1.0394318135893124 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6803 0.14942216693111512 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010345118421954317 0.0 2 0.0 0.0 0.0 0.03432997896712229 0.0 3 0.0 0.0 0.0 0.06167535568757479 0.0 4 0.0 0.0 0.0 0.09897049598583048 0.0 5 0.0 0.0 0.0 0.17788771570999581 0.0 6 0.0 0.0 0.0 0.3435413954093153 0.0 7 2.196415800839558E-5 0.0 0.0 0.4457845509383967 0.0 8 2.196415800839558E-5 0.0 0.0 0.6572774284012377 0.0 9 4.392831601679116E-5 0.0 0.0 0.7848013297979824 0.0 10 8.785663203358232E-5 0.0 0.0 0.9401098910753476 0.0 11 8.785663203358232E-5 0.0 0.0 1.055729218831542 0.0 12 1.098207900419779E-4 0.0 0.0 1.1439812057092753 0.0 13 1.3178494805037347E-4 0.0 0.0 1.1921266400636785 0.0 14 1.3178494805037347E-4 0.0 0.0 1.2196257658901897 0.0 15 1.3178494805037347E-4 0.0 0.0 1.2437863396994249 0.0 16 1.3178494805037347E-4 0.0 0.0 1.2844639603309735 0.0 17 1.3178494805037347E-4 0.0 0.0 1.3298419107763189 0.0 18 1.3178494805037347E-4 0.0 0.0 1.3896503130331799 0.0 19 1.3178494805037347E-4 0.0 0.0 1.426132779485125 0.0 20 1.3178494805037347E-4 0.0 0.0 1.4656023714262119 0.0 21 1.3178494805037347E-4 0.0 0.0 1.5143847663628585 0.0 22 1.3178494805037347E-4 0.0 0.0 1.570722831654393 0.0 23 1.3178494805037347E-4 0.0 0.0 1.6310583737034559 0.0 24 1.3178494805037347E-4 0.0 0.0 1.681268438910648 0.0 25 1.3178494805037347E-4 0.0 0.0 1.7270637083581528 0.0 26 1.3178494805037347E-4 0.0 0.0 1.7740670064961195 0.0 27 1.3178494805037347E-4 0.0 0.0 1.823288684592934 0.0 28 1.5374910605876906E-4 0.0 0.0 1.8710387641031858 0.0 29 1.5374910605876906E-4 0.0 0.0 1.9259052308081581 0.0 30 1.7571326406716465E-4 0.0 0.0 2.002977461259618 0.0 31 1.976774220755602E-4 0.0 0.0 2.0647846018952434 0.0 32 1.976774220755602E-4 0.0 0.0 2.127448344693196 0.0 33 2.196415800839558E-4 0.0 0.0 2.1916056502357195 0.0 34 2.196415800839558E-4 0.0 0.0 2.2609245329102157 0.0 35 2.196415800839558E-4 0.0 0.0 2.345398684610505 0.0 36 2.196415800839558E-4 0.0 0.0 2.41350953859454 0.0 37 2.4160573809235139E-4 0.0 0.0 2.4900985575698154 0.0 38 2.4160573809235139E-4 0.0 0.0 2.5738478920558276 0.0 39 3.074982121175381E-4 0.0 0.0 2.7069726537447134 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 36510 0.0 42.57806 1 CGTAAGG 570 0.0 38.289474 2 AGGGCGA 4385 0.0 38.1756 6 GGGCGAT 8415 0.0 37.48663 7 TATAGCG 205 0.0 37.317074 1 ACGGGTA 610 0.0 37.2541 5 TAGGGCG 1750 0.0 36.642857 5 GTTTTTT 45550 0.0 36.00494 2 GACCGAT 2660 0.0 35.949245 9 ATAGCGG 765 0.0 35.88235 2 CTACGGG 805 0.0 35.776398 3 TCGTTGA 1305 0.0 35.689655 24 GCGTAAG 265 0.0 35.660378 1 GCCCTAC 2890 0.0 35.65744 26 CCCTAGC 2890 0.0 35.50173 21 ATTATAC 2875 0.0 35.45217 42 TACGGGA 985 0.0 35.40609 4 TAGGGAT 3920 0.0 35.357143 5 CGGTCTA 205 0.0 35.121952 31 CGAATAT 750 0.0 35.100002 14 >>END_MODULE