##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545417_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 194059 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.298038225488124 31.0 31.0 33.0 30.0 34.0 2 31.6416193013465 31.0 31.0 34.0 30.0 34.0 3 31.73876501476355 31.0 31.0 34.0 30.0 34.0 4 35.44328271298935 37.0 35.0 37.0 33.0 37.0 5 35.2962707217908 37.0 35.0 37.0 33.0 37.0 6 35.37191266573568 37.0 35.0 37.0 33.0 37.0 7 35.80517780674949 37.0 35.0 37.0 35.0 37.0 8 35.84862850988617 37.0 35.0 37.0 35.0 37.0 9 37.49788466394241 39.0 37.0 39.0 35.0 39.0 10 36.89051783220567 39.0 37.0 39.0 32.0 39.0 11 36.49524629107643 39.0 35.0 39.0 32.0 39.0 12 35.55496008945733 37.0 35.0 39.0 31.0 39.0 13 35.11912356551358 37.0 35.0 39.0 30.0 39.0 14 36.07107116907745 38.0 35.0 40.0 30.0 41.0 15 36.353742933850015 38.0 35.0 40.0 31.0 41.0 16 36.569579354732326 38.0 35.0 40.0 32.0 41.0 17 36.5218103772564 38.0 35.0 40.0 31.0 41.0 18 36.481734936282265 38.0 35.0 40.0 31.0 41.0 19 36.41929516281131 37.0 35.0 40.0 31.0 41.0 20 36.25542747308808 37.0 35.0 40.0 31.0 41.0 21 36.08400022673517 37.0 34.0 40.0 31.0 41.0 22 35.978315873007695 37.0 34.0 40.0 30.0 41.0 23 35.925383517383885 36.0 34.0 40.0 30.0 41.0 24 35.856667302212216 36.0 34.0 40.0 30.0 41.0 25 35.744510690047875 36.0 34.0 40.0 30.0 41.0 26 35.62740712875981 36.0 34.0 40.0 30.0 41.0 27 35.56399342468012 36.0 34.0 40.0 30.0 41.0 28 35.603677232181965 36.0 34.0 40.0 30.0 41.0 29 35.64857079547973 36.0 34.0 40.0 30.0 41.0 30 35.55974729334893 36.0 34.0 40.0 30.0 41.0 31 35.37914757882912 36.0 34.0 40.0 29.0 41.0 32 35.21051845057431 36.0 34.0 40.0 29.0 41.0 33 35.029351898134074 36.0 34.0 40.0 27.0 41.0 34 34.885843995898156 36.0 34.0 40.0 27.0 41.0 35 34.717163336923306 35.0 34.0 40.0 27.0 41.0 36 34.527159265996424 35.0 33.0 40.0 25.0 41.0 37 34.44629210703961 35.0 33.0 40.0 25.0 41.0 38 34.447296956080365 35.0 33.0 40.0 25.0 41.0 39 34.416296074905055 35.0 33.0 40.0 25.0 41.0 40 34.225900370505876 35.0 33.0 40.0 24.0 41.0 41 34.203479354217016 35.0 33.0 40.0 24.0 41.0 42 34.12482801622187 35.0 33.0 40.0 24.0 41.0 43 34.03145950458366 35.0 33.0 40.0 23.0 41.0 44 33.97753260606311 35.0 33.0 40.0 23.0 41.0 45 33.943465647045485 35.0 33.0 40.0 23.0 41.0 46 33.92572362013615 35.0 33.0 39.0 23.0 41.0 47 33.85950149181434 35.0 33.0 39.0 23.0 41.0 48 33.85125142353614 35.0 33.0 39.0 23.0 41.0 49 33.80804291478365 35.0 33.0 39.0 24.0 41.0 50 33.680215810655525 35.0 33.0 39.0 24.0 41.0 51 33.53316259488094 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 6.0 16 23.0 17 47.0 18 124.0 19 219.0 20 412.0 21 618.0 22 859.0 23 1285.0 24 1750.0 25 2535.0 26 3327.0 27 3818.0 28 4357.0 29 4978.0 30 5874.0 31 7322.0 32 8806.0 33 11283.0 34 19732.0 35 30367.0 36 13249.0 37 15879.0 38 21693.0 39 35460.0 40 34.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.859382971158258 24.425561298368024 29.50236783658578 14.21268789388794 2 29.75486836477566 26.82328570177111 30.38715029965114 13.034695633802091 3 28.644381347940573 25.38506330548957 31.76559706068773 14.20495828588213 4 25.809676438608875 28.24811011084258 30.70715607109178 15.235057379456762 5 23.22025775666163 32.41694536197755 29.48330147017144 14.879495411189382 6 21.93095914129208 40.86849875553311 26.778453975337396 10.42208812783741 7 86.02847587589342 5.13039848705806 6.876774589171335 1.9643510478771922 8 87.84544906445979 4.052375823847386 6.139885292617193 1.9622898190756421 9 82.52077976285562 5.918303196450564 8.443308478349367 3.117608562344442 10 53.420866849772494 21.54138689779912 13.897319887250784 11.140426365177602 11 47.114537331430135 19.788827109281197 19.37400481296925 13.72263074631942 12 43.025574696355235 19.924352902983113 23.785034448286346 13.265037952375309 13 21.57436655862392 40.98083572521759 22.609103417002046 14.835694299156444 14 15.704502239009784 42.28095579179528 26.01786054756543 15.996681421629505 15 14.618749967793299 23.08627788456088 47.386619533234736 14.90835261441108 16 15.936905786384553 17.835297512612144 46.175132305123704 20.052664395879603 17 15.588558118922597 19.422958997006067 28.708279440788626 36.28020344328271 18 21.623836049861126 22.64775145703111 34.67656743567678 21.051845057430988 19 29.810006235217124 23.84841723393401 25.129470934097363 21.212105596751503 20 32.27729711067253 21.350207926455354 25.762783483373614 20.6097114794985 21 21.6042543762464 28.834014397683177 27.165964990028808 22.395766236041617 22 22.71525670028187 25.186670033340373 24.11173921333203 27.986334053045724 23 20.047511323875728 30.629859991033655 23.92674392839291 25.395884756697708 24 20.271154648843908 22.162332074266075 40.207359617435934 17.359153659454083 25 17.342663829041683 25.227379302170988 35.805605511725815 21.62435135706151 26 17.5482714019963 33.92834138071411 27.22316408927182 21.300223128017766 27 17.87909862464508 34.71366955410468 28.267176477256918 19.140055343993325 28 15.677706264589636 28.30221736688327 37.96062022374639 18.05945614478071 29 15.776645247064035 23.52377369768988 36.96556201979811 23.734019035447982 30 18.489737657104282 31.91039838399662 29.73219484795861 19.867669110940486 31 28.880907352918445 27.54420047511324 24.567786085674975 19.007106086293344 32 30.84216655759331 25.23150175977409 26.26881515415415 17.657516528478453 33 28.524314770250285 27.743109054462817 24.535321732050562 19.197254443236336 34 20.274761799246622 26.26623861815221 28.40579411416116 25.05320546844001 35 20.74884442360313 25.25623650539269 31.14207534821884 22.852843722785337 36 30.238741825939535 25.88542659706584 24.711041487382705 19.164790089611923 37 20.061424618286193 33.423855631534735 28.78042244884288 17.73429730133619 38 20.16757790156602 32.91936988235536 25.31395091183609 21.599101304242524 39 21.169850406319725 33.01109456402435 26.206978290107646 19.612076739548282 40 25.639625062481 26.281697834163836 25.09443004447101 22.98424705888415 41 16.90671393751385 24.945506263559018 27.51946572949464 30.628314069432495 42 21.50016232176812 25.083608593262873 24.414739847159883 29.001489237809118 43 21.910862160476967 26.235320186128963 25.85708470104453 25.996732952349543 44 19.534780659490156 29.379724722893553 28.819585796072328 22.265908821543963 45 16.9293874543309 37.91630380451306 22.67815458185397 22.476154159302066 46 20.96218160456356 34.25092368815669 25.54790038081202 19.238994326467722 47 21.478004112151456 27.522042265496577 27.018587130717975 23.981366491633988 48 22.934262260446562 23.435656166423612 32.0763273025214 21.553754270608426 49 20.805528215645758 24.118953514137452 32.63904276534456 22.43647550487223 50 19.095738924759996 33.58102432765293 27.386516471794657 19.936720275792414 51 18.93341715663793 34.09684683524083 23.849447848334783 23.120288159786455 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 87.0 1 193.0 2 299.0 3 762.0 4 1225.0 5 925.0 6 625.0 7 652.5 8 680.0 9 721.0 10 762.0 11 779.0 12 796.0 13 877.5 14 959.0 15 912.5 16 866.0 17 797.5 18 729.0 19 737.0 20 745.0 21 734.0 22 723.0 23 751.5 24 780.0 25 863.0 26 1218.5 27 1491.0 28 1922.0 29 2353.0 30 2719.0 31 3085.0 32 3545.0 33 4005.0 34 4728.0 35 5451.0 36 5758.5 37 6066.0 38 7180.5 39 8295.0 40 11072.5 41 13850.0 42 16681.0 43 19512.0 44 20090.0 45 20668.0 46 19114.0 47 17560.0 48 16155.0 49 14750.0 50 13692.5 51 12635.0 52 11642.0 53 10649.0 54 9832.0 55 9015.0 56 8173.5 57 7332.0 58 6704.5 59 6077.0 60 5666.0 61 5255.0 62 4903.0 63 4551.0 64 4060.5 65 3570.0 66 3039.0 67 2508.0 68 2198.0 69 1888.0 70 1532.0 71 1176.0 72 1002.5 73 829.0 74 710.5 75 457.0 76 322.0 77 237.0 78 152.0 79 143.5 80 135.0 81 91.0 82 47.0 83 29.0 84 11.0 85 8.0 86 5.0 87 3.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 194059.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.27017556516317 #Duplication Level Percentage of deduplicated Percentage of total 1 67.28746042014232 20.36803240251676 2 6.833270913486092 4.1368862047109385 3 3.8643559974124138 3.50924203463895 4 3.0301998570018043 3.668987266759079 5 2.5007660617616017 3.7849313868462686 6 2.058152599502911 3.738038431611005 7 1.8130128357904056 3.8416151788888944 8 1.598515542541963 3.8709876893109825 9 1.344863981478329 3.6638341947552036 >10 9.633652242007422 47.80607959435017 >50 0.02553539205338599 0.49160306916968555 >100 0.006809437880902931 0.4704754739537975 >500 0.0034047189404514656 0.6492870724882639 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 664 0.34216398105730733 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 596 0.30712309143095656 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 421 0.21694433136314212 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 209 0.10769920488098982 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.022673516817050484 0.0 2 0.0 0.0 0.0 0.09223998886936448 0.0 3 0.0 0.0 0.0 0.1303727216980403 0.0 4 0.0 0.0 0.0 0.24425561298368023 0.0 5 0.0 0.0 0.0 0.4199753683158215 0.0 6 0.0 0.0 0.0 0.6487717652878764 0.0 7 0.0 0.0 0.0 0.7791444869859167 0.0 8 0.0 0.0 0.0 1.1285227688486492 0.0 9 0.0 0.0 0.0 1.2764159353598648 0.0 10 0.0 0.0 0.0 1.543860372360983 0.0 11 0.0 0.0 0.0 1.7494679453156 0.0 12 0.0 0.0 0.0 1.9303407726516162 0.0 13 0.0 0.0 0.0 2.0045450095074178 0.0 14 0.0 0.0 0.0 2.030825676727181 0.0 15 0.0 0.0 0.0 2.065351259153144 0.0 16 0.0 0.0 0.0 2.149861640016696 0.0 17 0.0 0.0 0.0 2.2338567136798604 0.0 18 0.0 0.0 0.0 2.3601069777748003 5.153072003875111E-4 19 0.0 0.0 0.0 2.4106070834127764 5.153072003875111E-4 20 0.0 0.0 0.0 2.477597019463153 5.153072003875111E-4 21 0.0 0.0 0.0 2.564168629128255 5.153072003875111E-4 22 0.0 0.0 0.0 2.6548626963964566 5.153072003875111E-4 23 0.0 0.0 0.0 2.762046594077059 5.153072003875111E-4 24 0.0 0.0 0.0 2.846041667740223 5.153072003875111E-4 25 0.0 0.0 0.0 2.912516296590212 5.153072003875111E-4 26 0.0 0.0 0.0 2.971776624634776 5.153072003875111E-4 27 0.0 0.0 0.0 3.0346441030820523 5.153072003875111E-4 28 0.0 0.0 0.0 3.1057564967355287 5.153072003875111E-4 29 0.0 0.0 0.0 3.181506655192493 5.153072003875111E-4 30 0.0 0.0 0.0 3.2768384872641825 5.153072003875111E-4 31 0.0 0.0 0.0 3.3732009337366473 5.153072003875111E-4 32 0.0 0.0 0.0 3.4654409226060117 5.153072003875111E-4 33 0.0 0.0 0.0 3.542737002664138 5.153072003875111E-4 34 0.0 0.0 0.0 3.636522913134665 5.153072003875111E-4 35 0.0 0.0 0.0 3.7679262492334806 5.153072003875111E-4 36 0.0 0.0 0.0 3.8658346173071076 5.153072003875111E-4 37 0.0 0.0 0.0 3.9786868941919726 5.153072003875111E-4 38 0.0 0.0 0.0 4.083809563071025 5.153072003875111E-4 39 0.0 0.0 0.0 4.1755342447400015 5.153072003875111E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTGCG 30 2.1561518E-6 45.000004 1 TTACGGG 30 2.1561518E-6 45.000004 3 ATAGTTA 55 1.8189894E-12 45.000004 37 TGGTATG 30 2.1561518E-6 45.000004 1 CTAGCGG 30 2.1561518E-6 45.000004 2 AAGTACA 25 3.8787897E-5 45.0 44 ACTGCGG 25 3.8787897E-5 45.0 2 ATGTGCG 20 7.018785E-4 45.0 1 CGTTCGG 20 7.018785E-4 45.0 45 TCTAGCG 25 3.8787897E-5 45.0 1 AAAGTAG 20 7.018785E-4 45.0 1 TGGCACA 20 7.018785E-4 45.0 22 GTTAACA 20 7.018785E-4 45.0 9 CTACGAA 50 2.1827873E-11 45.0 11 CTTGCGG 20 7.018785E-4 45.0 2 ATGACGG 20 7.018785E-4 45.0 2 GCGATAT 25 3.8787897E-5 45.0 9 TAAGGTT 20 7.018785E-4 45.0 1 TACTAAG 20 7.018785E-4 45.0 1 TGGGCAC 25 3.8787897E-5 45.0 6 >>END_MODULE