SRR1545411_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545411_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2676327
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9782	0.3655009272035891	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	7909	0.29551695289850605	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	3885	0.14516163383622405	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGTAG	85	0.0	45.000004	1
CTCGATT	60	0.0	45.000004	20
TTACACG	100	0.0	42.75	34
ACTCGAT	60	3.6379788E-12	41.250004	19
CGTAGTA	45	1.9299478E-8	40.0	23
ACTCGAC	45	1.9299478E-8	40.0	20
GCTACGA	520	0.0	39.80769	10
CGTTTTT	8350	0.0	39.74551	1
CGTTAGG	385	0.0	39.740257	2
TACGTTC	40	3.4605182E-7	39.375	27
ACGTTAG	145	0.0	38.793106	1
CGAGGGT	530	0.0	38.632076	4
ATTACGC	35	6.2514027E-6	38.571426	44
CATTACG	35	6.2514027E-6	38.571426	43
CTACGTT	35	6.2514027E-6	38.571426	45
GGGCGAT	5125	0.0	38.107315	7
TAGGGTA	1785	0.0	37.815125	5
AGGGCGA	3045	0.0	37.75862	6
AAACTCG	30	1.140327E-4	37.500004	1
CGGCTAC	1185	0.0	37.40506	25