##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545411_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2676327 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28779517600054 31.0 31.0 33.0 30.0 34.0 2 31.62918357883771 31.0 31.0 34.0 30.0 34.0 3 31.735792001500563 31.0 31.0 34.0 30.0 34.0 4 35.43784597323123 37.0 35.0 37.0 33.0 37.0 5 35.2945114703846 37.0 35.0 37.0 33.0 37.0 6 35.3711153382976 37.0 35.0 37.0 33.0 37.0 7 35.83334809236689 37.0 35.0 37.0 35.0 37.0 8 35.869391146896476 37.0 35.0 37.0 35.0 37.0 9 37.5216466448233 39.0 37.0 39.0 35.0 39.0 10 36.83937874557182 39.0 37.0 39.0 32.0 39.0 11 36.50080277933152 39.0 35.0 39.0 32.0 39.0 12 35.83841137499267 37.0 35.0 39.0 31.0 39.0 13 35.561506497524405 37.0 35.0 39.0 30.0 39.0 14 36.55666777639653 38.0 35.0 41.0 31.0 41.0 15 36.75321588131794 38.0 35.0 41.0 31.0 41.0 16 36.8876650723174 38.0 35.0 41.0 32.0 41.0 17 36.837581506295756 38.0 35.0 41.0 32.0 41.0 18 36.76092607517691 38.0 35.0 40.0 31.0 41.0 19 36.72430611057617 38.0 35.0 40.0 31.0 41.0 20 36.59130143663312 38.0 35.0 40.0 31.0 41.0 21 36.415194406363646 38.0 35.0 40.0 31.0 41.0 22 36.33536036515717 38.0 35.0 40.0 31.0 41.0 23 36.27919533001759 38.0 35.0 40.0 31.0 41.0 24 36.21081205697211 38.0 35.0 40.0 30.0 41.0 25 36.10668688841087 38.0 35.0 40.0 30.0 41.0 26 36.01465067609451 38.0 35.0 40.0 30.0 41.0 27 35.96960909485276 37.0 34.0 40.0 30.0 41.0 28 35.96469900725883 37.0 35.0 40.0 30.0 41.0 29 35.9808031679238 37.0 35.0 40.0 30.0 41.0 30 35.90770634530085 37.0 35.0 40.0 30.0 41.0 31 35.75595620415592 37.0 34.0 40.0 30.0 41.0 32 35.58860819324395 37.0 34.0 40.0 29.0 41.0 33 35.42860943375006 37.0 34.0 40.0 29.0 41.0 34 35.25857228955953 37.0 34.0 40.0 27.0 41.0 35 35.12809122353136 37.0 34.0 40.0 27.0 41.0 36 34.96058628112335 37.0 34.0 40.0 26.0 41.0 37 34.90141600783462 37.0 34.0 40.0 26.0 41.0 38 34.884746893783905 37.0 34.0 40.0 26.0 41.0 39 34.8092243586079 37.0 34.0 40.0 26.0 41.0 40 34.67559756337697 36.0 33.0 40.0 25.0 41.0 41 34.6464221300312 36.0 34.0 40.0 25.0 41.0 42 34.560293641247874 36.0 33.0 40.0 25.0 41.0 43 34.48711312182704 36.0 33.0 40.0 25.0 41.0 44 34.42209453478592 36.0 33.0 40.0 24.0 41.0 45 34.3665221028671 36.0 33.0 40.0 24.0 41.0 46 34.333396853224585 36.0 33.0 40.0 24.0 41.0 47 34.29008787042839 35.0 33.0 40.0 24.0 41.0 48 34.26625184441214 35.0 33.0 40.0 24.0 41.0 49 34.20408604778115 36.0 33.0 40.0 24.0 41.0 50 34.06825436503088 35.0 33.0 40.0 24.0 41.0 51 33.919010644065544 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 7.0 13 10.0 14 18.0 15 67.0 16 232.0 17 604.0 18 1424.0 19 2690.0 20 4652.0 21 7352.0 22 11125.0 23 16275.0 24 22933.0 25 32114.0 26 41893.0 27 49341.0 28 55724.0 29 63925.0 30 75775.0 31 92291.0 32 115229.0 33 147986.0 34 241325.0 35 359170.0 36 197531.0 37 241374.0 38 340022.0 39 554993.0 40 243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.4889570669055 24.057598342803402 28.53870248291782 13.914742107373277 2 30.167389859310912 26.00459510366259 30.550825814633264 13.277189222393226 3 28.906445288636256 25.376308649877238 31.51150812288633 14.20573793860018 4 26.371179605481693 27.71690454865941 31.185277434334445 14.726638411524451 5 22.68269161429078 32.811648202928865 30.082310569672536 14.423349613107817 6 21.62209625355945 41.00291182654436 27.273087332003897 10.101904587892287 7 85.7979237963074 5.255374249858108 7.050820023113767 1.8958819307207226 8 87.04818207939464 4.337661279806242 6.5427729870079405 2.0713836537911847 9 81.89668153405768 6.295120140401378 8.331978865063947 3.47621946047699 10 47.82677901467197 22.406492181261857 16.895954791772454 12.870774012293715 11 41.08167649169926 23.70102756501728 20.166892909573455 15.050403033710005 12 35.93406186912137 22.291334354882643 26.726778902578047 15.047824873417934 13 22.046297033210067 37.03149876677999 25.264775193763693 15.657429006246248 14 17.924603383667243 38.143358416217445 28.106655128465242 15.825383071650064 15 17.567546865536237 24.02804291104936 42.698145630186445 15.706264593227958 16 17.800926418931617 20.895353968330475 41.4101864234079 19.893533189330004 17 18.462691591871994 21.47891494574467 29.477339652441575 30.58105380994176 18 22.15816677110084 24.430273281254493 33.19594354501524 20.215616402629426 19 28.56952831249694 25.31484381392857 25.965847969997686 20.149779903576807 20 29.874525795988312 23.4886095757357 27.119331830527436 19.517532797748558 21 23.29924557051511 27.661679607910393 27.99945597081373 21.039618850760764 22 22.98956741833117 25.469608160736712 25.963606091482845 25.57721832944928 23 21.07343385169301 28.921802156462945 26.680035735543527 23.32472825630052 24 20.75179901409656 23.881349326894657 37.326866261110844 18.03998539789794 25 18.988972573231898 26.196462539891424 34.08626823254408 20.7282966543326 26 18.675670050782283 32.44667038071207 28.038576750897782 20.839082817607864 27 19.129986731815656 32.78407309719627 28.75799556631159 19.327944604676482 28 17.44263686761745 28.61376804852322 35.23396057357714 18.70963451028219 29 17.83055657996949 25.09009549281534 34.98627036232867 22.093077564886503 30 19.47788891267771 30.568947665961595 30.08862519415602 19.864538227204672 31 27.301297636649036 27.749262328557013 26.262672685363185 18.68676734943077 32 27.992543512059626 26.692515525942834 27.221935137223515 18.09300582477403 33 27.061454000202517 27.895806454144058 24.8276462480108 20.21509329764263 34 20.422467060265806 28.049375132410947 27.991086291024974 23.53707151629827 35 22.379290721948404 25.867803149615128 29.957251113186096 21.79565501525038 36 28.441778601792684 27.029731419217455 25.80749661756579 18.72099336142407 37 21.02228165691263 32.634988175959066 27.895769089502142 18.446961077626163 38 21.204658474095282 32.37011022943011 25.335880107326197 21.089351189148413 39 21.913316272637836 31.420898866244674 27.462526066508314 19.20325879460918 40 24.42373446891953 27.123479305779902 25.913612200601793 22.539174024698774 41 18.825651723425427 25.783508517456948 27.99471066129064 27.396129097826982 42 21.38023492644957 25.952321969624787 26.076223122211893 26.591219981713742 43 21.865751083481204 26.482563603027582 27.427067021331847 24.224618292159366 44 20.14223224591016 29.574749273911593 28.69309318330682 21.58992529687142 45 18.817693054697727 35.005102141853364 24.439763900300672 21.737440903148233 46 21.48418336025456 33.23233670623956 25.940738930631426 19.34274100287446 47 21.36028220766745 28.27666424917433 27.934254670673653 22.428798872484563 48 22.3981225014731 25.653554292879754 30.502849614415577 21.445473591231565 49 21.37795568329281 26.27022034302983 30.916476200404507 21.43534777327285 50 20.13326473185078 32.35763043903081 27.543831527313365 19.96527330180505 51 19.625068237177295 32.3485881956876 25.64791223195073 22.37843133518438 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1152.0 1 2515.0 2 3878.0 3 10878.0 4 17878.0 5 13593.5 6 9309.0 7 9537.5 8 9766.0 9 10454.0 10 11142.0 11 11547.5 12 11953.0 13 11754.5 14 11556.0 15 11122.5 16 10689.0 17 10498.5 18 10308.0 19 10288.0 20 10268.0 21 11989.0 22 13710.0 23 13411.5 24 13113.0 25 15257.0 26 22661.0 27 27921.0 28 32503.0 29 37085.0 30 42574.5 31 48064.0 32 55686.5 33 63309.0 34 74229.5 35 85150.0 36 89681.0 37 94212.0 38 106719.0 39 119226.0 40 146001.0 41 172776.0 42 205577.5 43 238379.0 44 251583.0 45 264787.0 46 247977.0 47 231167.0 48 219294.5 49 207422.0 50 199712.0 51 192002.0 52 179682.0 53 167362.0 54 148968.0 55 130574.0 56 118332.5 57 106091.0 58 96854.5 59 87618.0 60 79989.0 61 72360.0 62 64419.5 63 56479.0 64 48690.0 65 40901.0 66 34121.0 67 27341.0 68 22721.0 69 18101.0 70 15169.0 71 12237.0 72 11367.5 73 10498.0 74 8276.5 75 4596.0 76 3137.0 77 2442.5 78 1748.0 79 1520.5 80 1293.0 81 902.0 82 511.0 83 352.0 84 193.0 85 155.0 86 117.0 87 75.0 88 33.0 89 29.0 90 25.0 91 20.0 92 15.0 93 14.0 94 13.0 95 7.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2676327.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.270983192705597 #Duplication Level Percentage of deduplicated Percentage of total 1 79.86920279787972 12.995504563390956 2 6.998418747127971 2.2774230762006997 3 2.4419718984972847 1.191998511525261 4 1.3108023900022636 0.8531217462674063 5 0.8770455224649208 0.7135196477632213 6 0.5938581420508263 0.579759350889622 7 0.4384285488628131 0.4993564484824395 8 0.34112542938712465 0.4440356902529908 9 0.2978456377963607 0.43616172299447376 >10 3.575529814375427 14.38654370880967 >50 1.600737560453046 18.9540525835063 >100 1.645774582484114 44.76311573674618 >500 0.007175669679023612 0.7088170574188136 >1k 0.001620312508166622 0.5302945891847447 >5k 4.629464309047491E-4 0.6662955665672812 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9782 0.3655009272035891 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7909 0.29551695289850605 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3885 0.14516163383622405 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.736464191408598E-5 0.0 0.0 0.022045138729310732 0.0 2 3.736464191408598E-5 0.0 0.0 0.07394462634797616 0.0 3 3.736464191408598E-5 0.0 0.0 0.10701233444194226 0.0 4 3.736464191408598E-5 0.0 0.0 0.1690002753774109 0.0 5 3.736464191408598E-5 0.0 0.0 0.2853537702978747 0.0 6 3.736464191408598E-5 0.0 0.0 0.438474072861799 0.0 7 3.736464191408598E-5 0.0 0.0 0.5278502963202927 0.0 8 3.736464191408598E-5 0.0 0.0 0.7654146896100514 0.0 9 3.736464191408598E-5 0.0 0.0 0.8768360517978558 0.0 10 7.472928382817197E-5 0.0 0.0 1.0626130513946912 0.0 11 7.472928382817197E-5 0.0 0.0 1.2263822769041302 0.0 12 7.472928382817197E-5 0.0 0.0 1.3664623194400385 0.0 13 7.472928382817197E-5 0.0 0.0 1.425834735441521 0.0 14 7.472928382817197E-5 0.0 0.0 1.4471699459744642 0.0 15 7.472928382817197E-5 0.0 0.0 1.4802376540684303 0.0 16 7.472928382817197E-5 0.0 0.0 1.5541075511325784 0.0 17 7.472928382817197E-5 0.0 0.0 1.643521139232986 0.0 18 7.472928382817197E-5 0.0 0.0 1.7645825790346248 0.0 19 7.472928382817197E-5 0.0 0.0 1.8262716028347807 0.0 20 7.472928382817197E-5 0.0 0.0 1.8902772344336098 0.0 21 7.472928382817197E-5 0.0 0.0 1.979317176114877 0.0 22 7.472928382817197E-5 0.0 0.0 2.071906758777982 0.0 23 7.472928382817197E-5 0.0 0.0 2.1777234246786734 0.0 24 7.472928382817197E-5 0.0 0.0 2.2632884546619305 0.0 25 7.472928382817197E-5 0.0 0.0 2.3359253185429134 0.0 26 7.472928382817197E-5 0.0 0.0 2.406469762476708 0.0 27 7.472928382817197E-5 0.0 0.0 2.4754075268081963 0.0 28 7.472928382817197E-5 0.0 0.0 2.5489411420951176 0.0 29 7.472928382817197E-5 0.0 0.0 2.6283036415206364 0.0 30 1.4945856765634393E-4 0.0 0.0 2.7310190421424587 0.0 31 1.868232095704299E-4 0.0 0.0 2.8236459894474777 0.0 32 2.241878514845159E-4 0.0 0.0 2.9170575942326926 0.0 33 2.241878514845159E-4 0.0 0.0 3.0038556573991144 0.0 34 2.241878514845159E-4 0.0 0.0 3.1029093231133564 0.0 35 2.241878514845159E-4 0.0 0.0 3.2193749119595623 0.0 36 2.241878514845159E-4 0.0 0.0 3.3222397711490412 0.0 37 2.241878514845159E-4 0.0 0.0 3.428616906678444 0.0 38 2.241878514845159E-4 0.0 0.0 3.536376533958668 0.0 39 2.241878514845159E-4 0.0 0.0 3.6477978961464723 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAG 85 0.0 45.000004 1 CTCGATT 60 0.0 45.000004 20 TTACACG 100 0.0 42.75 34 ACTCGAT 60 3.6379788E-12 41.250004 19 CGTAGTA 45 1.9299478E-8 40.0 23 ACTCGAC 45 1.9299478E-8 40.0 20 GCTACGA 520 0.0 39.80769 10 CGTTTTT 8350 0.0 39.74551 1 CGTTAGG 385 0.0 39.740257 2 TACGTTC 40 3.4605182E-7 39.375 27 ACGTTAG 145 0.0 38.793106 1 CGAGGGT 530 0.0 38.632076 4 ATTACGC 35 6.2514027E-6 38.571426 44 CATTACG 35 6.2514027E-6 38.571426 43 CTACGTT 35 6.2514027E-6 38.571426 45 GGGCGAT 5125 0.0 38.107315 7 TAGGGTA 1785 0.0 37.815125 5 AGGGCGA 3045 0.0 37.75862 6 AAACTCG 30 1.140327E-4 37.500004 1 CGGCTAC 1185 0.0 37.40506 25 >>END_MODULE