##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545410_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 6549934 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.226632665306244 31.0 31.0 33.0 30.0 34.0 2 31.60561220922226 31.0 31.0 34.0 30.0 34.0 3 31.611447077176656 31.0 31.0 34.0 30.0 34.0 4 35.40577324901289 37.0 35.0 37.0 33.0 37.0 5 35.29632619198911 37.0 35.0 37.0 33.0 37.0 6 35.371019463707576 37.0 35.0 37.0 33.0 37.0 7 35.792674246793936 37.0 35.0 37.0 35.0 37.0 8 35.81186161570483 37.0 35.0 37.0 35.0 37.0 9 37.465895534214546 39.0 37.0 39.0 35.0 39.0 10 36.889657056086364 39.0 37.0 39.0 32.0 39.0 11 36.59096580209816 39.0 35.0 39.0 32.0 39.0 12 36.23872026802102 38.0 35.0 39.0 32.0 39.0 13 36.078737587279505 38.0 35.0 39.0 31.0 39.0 14 37.13336790874534 39.0 35.0 41.0 31.0 41.0 15 37.2254071567744 39.0 35.0 41.0 32.0 41.0 16 37.294578540791406 39.0 35.0 41.0 32.0 41.0 17 37.21944877612507 39.0 35.0 41.0 32.0 41.0 18 37.002647965613086 39.0 35.0 40.0 31.0 41.0 19 36.82303348400152 38.0 35.0 40.0 31.0 41.0 20 36.54124835456357 38.0 35.0 40.0 31.0 41.0 21 36.358438420906225 38.0 35.0 40.0 30.0 41.0 22 36.34490378070985 38.0 35.0 40.0 30.0 41.0 23 36.23373975982048 38.0 35.0 40.0 30.0 41.0 24 36.13230850875749 38.0 35.0 40.0 30.0 41.0 25 36.00073084705892 38.0 35.0 40.0 30.0 41.0 26 35.942211936792035 38.0 35.0 40.0 30.0 41.0 27 35.90053838710436 38.0 35.0 40.0 30.0 41.0 28 35.82080506460065 38.0 35.0 40.0 30.0 41.0 29 35.7468298153844 37.0 34.0 40.0 29.0 41.0 30 35.577859257818474 37.0 34.0 40.0 29.0 41.0 31 35.33372305736211 37.0 34.0 40.0 27.0 41.0 32 34.996436757988704 37.0 34.0 40.0 25.0 41.0 33 34.581361430512125 37.0 33.0 40.0 23.0 41.0 34 34.14873676589718 37.0 33.0 40.0 21.0 41.0 35 33.838177148044544 37.0 33.0 40.0 20.0 41.0 36 33.638516815589284 37.0 33.0 40.0 18.0 41.0 37 33.54428930123571 37.0 33.0 40.0 18.0 41.0 38 33.43100877047005 36.0 32.0 40.0 18.0 41.0 39 33.27805348878324 36.0 32.0 40.0 18.0 41.0 40 33.116975529829766 36.0 32.0 40.0 17.0 41.0 41 32.982620588237985 36.0 32.0 40.0 16.0 41.0 42 32.84842198409938 35.0 31.0 40.0 15.0 41.0 43 32.76929950744542 35.0 31.0 40.0 15.0 41.0 44 32.65391788680619 35.0 31.0 40.0 15.0 41.0 45 32.610234393201516 35.0 31.0 40.0 15.0 41.0 46 32.55991831368072 35.0 31.0 40.0 15.0 41.0 47 32.50032534678975 35.0 31.0 39.0 15.0 41.0 48 32.43234847862589 35.0 31.0 39.0 15.0 41.0 49 32.34045671299894 35.0 31.0 39.0 15.0 41.0 50 32.23438587320116 35.0 31.0 39.0 15.0 41.0 51 32.07799055685141 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 6.0 11 5.0 12 8.0 13 24.0 14 82.0 15 269.0 16 891.0 17 2365.0 18 5686.0 19 10935.0 20 18505.0 21 28857.0 22 42434.0 23 61325.0 24 86918.0 25 128440.0 26 173226.0 27 192045.0 28 188297.0 29 187992.0 30 203191.0 31 231437.0 32 271998.0 33 336426.0 34 493183.0 35 648373.0 36 532640.0 37 650711.0 38 864214.0 39 1188985.0 40 466.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.779475640517905 22.292377297236886 26.44078551020514 21.487361552040067 2 37.51340089839073 23.38331958764775 26.0687512271116 13.034528286849914 3 26.757185644924053 23.544359378277704 36.8521270596009 12.846327917197334 4 24.08016630396581 25.34211795111218 36.05306557287447 14.524650172047535 5 21.138716817604575 29.443273779552587 35.49060189003431 13.927407512808527 6 20.382022169994386 37.10854185706299 32.470769934475676 10.038666038466951 7 78.29242248853194 4.4843352620041665 14.559032197881688 2.664210051582199 8 78.97728435126217 3.857641924330841 14.948272761221714 2.216800963185278 9 74.108349794059 5.49480345908829 16.827925289018182 3.568921457834537 10 40.738013543342575 23.17482893720761 23.010888353989518 13.076269165460294 11 31.284910657115017 23.366632396601247 29.55165655104311 15.796800395240624 12 26.994684221245592 20.69211689766645 34.28481874779196 18.028380133296 13 22.041916758245197 25.11519963407265 34.39109462782373 18.45178897985842 14 19.324866479570634 26.197943368589666 35.598908324877776 18.87828182696192 15 18.36392549909663 21.598461908165792 41.572266224361954 18.46534636837562 16 21.50597242659239 19.76648925012069 38.93207168194366 19.795466641343257 17 21.161694148368518 20.101836140638973 33.91893719845116 24.817532512541348 18 23.50684754991424 20.923096324329375 35.9242703819611 19.64578574379528 19 26.217226005636086 22.668778036542047 31.914107836811787 19.199888121010076 20 27.55482727001524 21.4541856452294 32.47751809407545 18.513468990679907 21 24.93538102826685 23.345227600766663 32.94117162096595 18.778219750000535 22 25.34552256557089 21.3100315209283 31.94479516892842 21.399650744572387 23 22.569173979463 24.554461159455958 32.10223186981732 20.77413299126373 24 21.34821511178586 22.453004869972737 37.14211471443834 19.05666530380306 25 21.167114050309515 23.13986675285583 34.786152043669446 20.906867153165205 26 20.294082352585537 24.18193832182126 33.614934135214185 21.909045190379018 27 19.568655195609605 23.915553958253625 34.538836574536475 21.976954271600295 28 19.495860568976724 23.39003721258871 36.311373519183554 20.802728699251016 29 20.128370759155743 22.735343592775134 36.15172305553003 20.9845625925391 30 20.783995686063403 23.528481355689994 34.9561384893344 20.731384468912207 31 24.151205187716396 23.293196542133096 32.196614500237715 20.358983769912797 32 24.860830658751677 22.892139065828754 31.464668193603174 20.782362081816398 33 24.53881214680942 23.90891266995973 30.175296422834187 21.37697876039667 34 21.229389486978036 25.132863934201477 31.702701126454098 21.93504545236639 35 22.260392242120304 26.492648628215186 30.282854758536498 20.964104371128016 36 24.432917950012932 27.121952679217838 27.430658079913478 21.014471290855756 37 21.878434194909442 29.27614232448754 27.731882489197602 21.11354099140541 38 22.900475027687303 28.153230246289507 27.632186828142085 21.314107897881108 39 22.599418559026702 27.870357166957717 27.705943296527874 21.82428097748771 40 24.9648775086894 24.935854315478597 28.567600833840462 21.531667341991536 41 21.89609849503827 24.800020885706633 28.921818143511064 24.38206247574403 42 22.386164501810246 24.772646564072247 28.138466738748818 24.702722195368686 43 22.24266687267383 25.041336294380983 28.986963838108903 23.72903299483628 44 21.992236868340964 26.069178712335116 29.21884403720709 22.719740382116825 45 20.72466684397125 27.95683132074308 27.63913346302421 23.67936837226146 46 21.497743336039722 26.987157427845837 28.463966201796843 23.051133034317598 47 21.61383610888293 26.683016958644163 29.496678897833167 22.20646803463974 48 22.424683973914853 25.939299541033545 29.82065162794007 21.81536485711154 49 22.080085081773344 25.509875366683083 30.019218514262892 22.39082103728068 50 21.083662827747577 27.94347240750823 29.184660486655282 21.78820427808891 51 21.30998571894007 27.087540118724863 28.682273745048427 22.920200417286647 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4154.0 1 7488.0 2 10822.0 3 88780.0 4 166738.0 5 116831.0 6 66924.0 7 68019.0 8 69114.0 9 70885.0 10 72656.0 11 73184.5 12 73713.0 13 72152.0 14 70591.0 15 67004.0 16 63417.0 17 60005.0 18 56593.0 19 52523.0 20 48453.0 21 48280.0 22 48107.0 23 47146.5 24 46186.0 25 51198.5 26 58949.0 27 61687.0 28 71651.5 29 81616.0 30 96908.5 31 112201.0 32 116696.0 33 121191.0 34 138081.0 35 154971.0 36 172403.0 37 189835.0 38 201469.5 39 213104.0 40 243744.5 41 274385.0 42 314024.5 43 353664.0 44 366515.0 45 379366.0 46 392611.5 47 405857.0 48 399395.0 49 392933.0 50 390902.5 51 388872.0 52 374368.0 53 359864.0 54 351667.5 55 343471.0 56 343130.0 57 342789.0 58 339039.0 59 335289.0 60 317997.5 61 300706.0 62 279330.5 63 257955.0 64 233406.5 65 208858.0 66 180696.5 67 152535.0 68 125894.5 69 99254.0 70 80992.0 71 62730.0 72 53403.5 73 44077.0 74 36658.0 75 21947.5 76 14656.0 77 11056.5 78 7457.0 79 5894.5 80 4332.0 81 2970.5 82 1609.0 83 1268.0 84 927.0 85 717.0 86 507.0 87 326.0 88 145.0 89 130.0 90 115.0 91 72.0 92 29.0 93 22.0 94 15.0 95 14.5 96 14.0 97 7.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 6549934.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.029332197048976 #Duplication Level Percentage of deduplicated Percentage of total 1 81.71739720586001 16.36744894914372 2 6.188972987099257 2.47921991834347 3 2.0261001649434163 1.2174429980444224 4 1.1587608931063709 0.9283682745990667 5 0.7503187263809293 0.7514191512175165 6 0.5990331321009825 0.719894015993358 7 0.48690328350828316 0.6826643329254926 8 0.40127296226249937 0.6429783570279598 9 0.3365214734495898 0.6066270344846009 >10 3.800215183253017 18.20529975013183 >50 1.4862077842617485 21.36626196313958 >100 1.0391616578080785 32.3170081840391 >500 0.006579969660542428 0.8506966632776041 >1k 0.0022449306928207713 0.7718537630973241 >5k 1.548228064014319E-4 0.20590622876062037 >10k+ 1.548228064014319E-4 1.886910415774188 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 104452 1.5947030916647404 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 17245 0.2632850956971475 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7880 0.12030655576071453 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.526732941125819E-5 0.0 0.0 0.016748260364150235 0.0 2 1.526732941125819E-5 0.0 0.0 0.05468757395112683 0.0 3 1.526732941125819E-5 0.0 0.0 0.09974146304374976 0.0 4 1.526732941125819E-5 0.0 0.0 0.15412369040665141 0.0 5 1.526732941125819E-5 0.0 0.0 0.2936212792373175 0.0 6 1.526732941125819E-5 0.0 0.0 0.57334928871039 0.0 7 1.526732941125819E-5 0.0 0.0 0.7765269085154141 0.0 8 3.053465882251638E-5 0.0 0.0 1.1381794076092981 0.0 9 3.053465882251638E-5 0.0 0.0 1.3843650943658363 0.0 10 3.053465882251638E-5 0.0 0.0 1.6826887110618214 0.0 11 3.053465882251638E-5 0.0 0.0 1.8902327870784652 0.0 12 6.106931764503276E-5 0.0 0.0 2.047730557285005 0.0 13 6.106931764503276E-5 0.0 0.0 2.1328001167645354 0.0 14 9.160397646754914E-5 0.0 0.0 2.185121254656917 0.0 15 1.0687130587880732E-4 0.0 0.0 2.2342209860435234 0.0 16 1.0687130587880732E-4 0.0 0.0 2.2887253520417152 0.0 17 1.0687130587880732E-4 0.0 0.0 2.353229818804281 0.0 18 1.0687130587880732E-4 0.0 0.0 2.451322410271615 0.0 19 1.0687130587880732E-4 0.0 0.0 2.5053840237168803 0.0 20 1.0687130587880732E-4 0.0 0.0 2.5659953214795754 0.0 21 1.0687130587880732E-4 0.0 0.0 2.632560877712661 0.0 22 1.0687130587880732E-4 0.0 0.0 2.7113250301453418 0.0 23 1.0687130587880732E-4 0.0 0.0 2.7984556790953925 0.0 24 1.2213863529006552E-4 0.0 0.0 2.870028919375371 0.0 25 1.526732941125819E-4 0.0 0.0 2.939693743478942 0.0 26 1.6794062352384008E-4 0.0 0.0 3.0026104079827367 1.526732941125819E-5 27 1.8320795293509827E-4 0.0 0.0 3.071985152827494 1.526732941125819E-5 28 1.9847528234635646E-4 0.0 0.0 3.139268273542909 1.526732941125819E-5 29 2.1374261175761465E-4 0.0 0.0 3.2185362478461617 1.526732941125819E-5 30 2.1374261175761465E-4 0.0 0.0 3.3311175349247795 1.526732941125819E-5 31 2.2900994116887286E-4 0.0 0.0 3.4190420850042154 1.526732941125819E-5 32 2.2900994116887286E-4 0.0 0.0 3.522737786365481 1.526732941125819E-5 33 2.4427727058013105E-4 0.0 0.0 3.6111508909860772 1.526732941125819E-5 34 2.4427727058013105E-4 0.0 0.0 3.712190077029784 1.526732941125819E-5 35 2.595445999913892E-4 0.0 0.0 3.8264660376730513 1.526732941125819E-5 36 2.595445999913892E-4 0.0 0.0 3.9229250248933805 1.526732941125819E-5 37 2.595445999913892E-4 0.0 0.0 4.024956587348819 1.526732941125819E-5 38 2.595445999913892E-4 0.0 0.0 4.147537975191811 1.526732941125819E-5 39 2.748119294026474E-4 0.0 0.0 4.345387297032306 1.526732941125819E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 70710 0.0 43.24671 1 TGCATTA 2515 0.0 38.648113 15 GGGCGAT 13000 0.0 38.440384 7 CGTTAGG 725 0.0 38.172417 2 GTTTTTT 84005 0.0 37.768288 2 ATACTAT 5045 0.0 37.23984 45 GGCGATA 2750 0.0 37.227272 8 CTCAACT 2770 0.0 37.120937 2 AGGGATC 5530 0.0 36.943943 6 GCATTAG 2645 0.0 36.833645 16 CGAATAT 860 0.0 36.627907 14 TGATTCG 1000 0.0 36.449997 15 TCAACTT 2805 0.0 36.41711 3 AGGGCGA 6895 0.0 36.287167 6 ATTATAC 5240 0.0 36.283398 42 CTTGACC 2820 0.0 35.984043 7 TATACTA 5245 0.0 35.94852 44 CTACGAA 905 0.0 35.801105 11 TACGGGA 1315 0.0 35.760456 4 GACCGAT 3320 0.0 35.71536 9 >>END_MODULE