##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545407_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2681201 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30577789580117 31.0 31.0 33.0 30.0 34.0 2 31.656473349070062 31.0 31.0 34.0 30.0 34.0 3 31.760390213191776 31.0 31.0 34.0 30.0 34.0 4 35.46162820318208 37.0 35.0 37.0 33.0 37.0 5 35.31367845976486 37.0 35.0 37.0 33.0 37.0 6 35.38819693115138 37.0 35.0 37.0 33.0 37.0 7 35.83720243279038 37.0 35.0 37.0 35.0 37.0 8 35.86288942902826 37.0 35.0 37.0 35.0 37.0 9 37.521168312260066 39.0 37.0 39.0 35.0 39.0 10 36.90426454413526 39.0 37.0 39.0 32.0 39.0 11 36.54936873438433 39.0 35.0 39.0 32.0 39.0 12 35.70592469568675 37.0 35.0 39.0 31.0 39.0 13 35.30157753931913 37.0 35.0 39.0 30.0 39.0 14 36.27633586590487 38.0 35.0 40.0 31.0 41.0 15 36.535130711945875 38.0 35.0 40.0 31.0 41.0 16 36.70898899411122 38.0 35.0 40.0 32.0 41.0 17 36.67217974333144 38.0 35.0 40.0 32.0 41.0 18 36.61780784059084 38.0 35.0 40.0 31.0 41.0 19 36.561401774801666 38.0 35.0 40.0 31.0 41.0 20 36.41005355435866 38.0 35.0 40.0 31.0 41.0 21 36.19553177848285 37.0 35.0 40.0 31.0 41.0 22 36.11800420781582 37.0 35.0 40.0 30.0 41.0 23 36.10039829166109 37.0 34.0 40.0 30.0 41.0 24 36.018694980346496 37.0 34.0 40.0 30.0 41.0 25 35.892130429609715 37.0 34.0 40.0 30.0 41.0 26 35.80726361059838 37.0 34.0 40.0 30.0 41.0 27 35.74682949916847 37.0 34.0 40.0 30.0 41.0 28 35.73732331145632 37.0 34.0 40.0 30.0 41.0 29 35.74859960144726 36.0 34.0 40.0 30.0 41.0 30 35.68445483945441 36.0 34.0 40.0 30.0 41.0 31 35.52353590797557 36.0 34.0 40.0 29.0 41.0 32 35.342063500647654 36.0 34.0 40.0 29.0 41.0 33 35.15847226671928 36.0 34.0 40.0 28.0 41.0 34 35.01214828727872 36.0 34.0 40.0 27.0 41.0 35 34.87897401201924 36.0 34.0 40.0 27.0 41.0 36 34.69359514635419 36.0 33.0 40.0 25.0 41.0 37 34.612024984326055 36.0 33.0 40.0 25.0 41.0 38 34.61034775087731 36.0 33.0 40.0 26.0 41.0 39 34.561130627655295 36.0 33.0 40.0 25.0 41.0 40 34.3697275959542 36.0 33.0 40.0 24.0 41.0 41 34.361655467083594 35.0 33.0 40.0 24.0 41.0 42 34.27774381704318 35.0 33.0 40.0 24.0 41.0 43 34.19375384389309 35.0 33.0 40.0 24.0 41.0 44 34.133053060923075 35.0 33.0 40.0 24.0 41.0 45 34.094165636966416 35.0 33.0 40.0 24.0 41.0 46 34.07603458300963 35.0 33.0 40.0 24.0 41.0 47 34.017745778850596 35.0 33.0 40.0 24.0 41.0 48 34.000027599571986 35.0 33.0 40.0 24.0 41.0 49 33.947618623146866 35.0 33.0 39.0 24.0 41.0 50 33.79976995383785 35.0 33.0 39.0 24.0 41.0 51 33.63447574426535 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 6.0 13 18.0 14 35.0 15 79.0 16 231.0 17 661.0 18 1529.0 19 3090.0 20 5201.0 21 8194.0 22 11865.0 23 17129.0 24 24023.0 25 33556.0 26 43884.0 27 51666.0 28 58070.0 29 66205.0 30 78960.0 31 95674.0 32 119471.0 33 153351.0 34 257165.0 35 403954.0 36 189988.0 37 227401.0 38 313909.0 39 515558.0 40 324.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.41853184449804 23.784043046381083 29.668756650471188 14.128668458649688 2 30.103487205920032 26.441098597233104 29.97544756995093 13.479966626895932 3 28.564065133498012 24.82458420685357 32.7575590192604 13.85379164038802 4 26.65477149978685 27.55235433673193 30.802129344275198 14.99074481920602 5 23.489734637574728 32.619039005281586 29.40279374802561 14.48843260911808 6 21.521325704413805 41.21917752529557 26.805263760531194 10.454233009759433 7 85.88214758983008 5.388480759182173 6.752086098729635 1.9772855522581112 8 87.37658981926383 4.360806966728716 6.427418160742144 1.8351850532653091 9 82.40881604922569 5.88732437441281 8.62583595933315 3.078023617028339 10 51.60627644104265 21.816305454160283 14.863376524177038 11.714041580620028 11 45.32174201039012 21.078203387213417 20.06753689857642 13.53251770382004 12 40.186021115164436 21.39861949924679 24.437556154872386 13.977803230716384 13 21.730895967889015 40.12347451757626 23.868147147490994 14.277482367043723 14 16.020656414793223 40.93710244028702 27.291053524148317 15.751187620771438 15 15.475042714067316 23.023413761221185 46.79899045241293 14.70255307229857 16 16.616546092590596 18.69285443351692 44.94015927936771 19.750440194524767 17 17.178346569317256 19.81727591478595 28.483541517402088 34.520835998494704 18 20.982835676996988 23.578015971200966 34.550337703141246 20.888810648660805 19 29.802912948339195 23.60990466585683 26.200683947231113 20.386498438572865 20 31.5609310902092 21.90089441261584 25.788592500151985 20.749581997022975 21 22.410330296012866 28.133884777754446 28.475224349088336 20.980560577144345 22 22.57876227854607 25.723136758489947 25.074733300487356 26.62336766247663 23 20.41723093494296 29.358074982069603 25.1296340707019 25.095060012285543 24 20.105728738725666 22.920922377695668 39.21764910575522 17.755699777823445 25 17.757788394081608 24.985817922639892 36.02989854173559 21.226495141542916 26 17.195130092820342 34.153314130496 27.57838744652117 21.07316833016249 27 18.54064652370337 34.094497204797406 28.18367589748027 19.181180374018954 28 16.7138905289085 28.73581652401293 36.967649944931395 17.582643002147172 29 16.858900171975172 23.74823819624116 36.30723694344438 23.085624688339294 30 19.035238312979892 30.834950456903453 30.775723267297007 19.354087962819648 31 28.022852445601803 27.919391347384998 24.931029042582036 19.126727164431166 32 29.796572506126918 26.292060908525695 26.349162185155084 17.562204400192304 33 28.261290369502323 27.744544329201727 24.904548372166055 19.089616929129892 34 20.205609351928484 27.17386723337788 27.62746992858797 24.99305348610567 35 21.042062866603437 25.47205524688377 30.90525477202194 22.580627114490856 36 29.872396735641978 26.028335809213853 24.90995639640594 19.18931105873823 37 20.70654158341728 33.684233296944164 27.76099218223475 17.8482329374038 38 20.400223631126497 33.24547469585458 25.203444277396585 21.150857395622335 39 21.23264910016071 33.2716569925194 26.407195879756873 19.088498027563023 40 25.08726499803633 26.21108973180302 26.04217289192418 22.65947237823647 41 17.686738144585206 25.555786380804722 27.364751840686317 29.39272363392375 42 21.621579284805577 25.27113782219237 24.920697851447915 28.186585041554142 43 21.59562076845414 25.716647129402087 26.690800130240145 25.996931971903635 44 19.603080858167665 29.799929210827536 28.831967465326176 21.765022465678626 45 17.770059014598306 36.66021309107374 23.901303930589314 21.668423963738636 46 20.569774515226573 33.79168514408282 25.620943748715597 20.017596591975014 47 21.733171067741658 27.30623328873889 27.219294636992903 23.74130100652655 48 22.61106123710979 24.42174234606059 31.37646151855083 21.590734898278793 49 21.282775890356596 25.462320803251977 32.18565113171299 21.06925217467844 50 19.692182719609608 34.210378110406495 26.20154177176571 19.89589739821819 51 19.056609332907158 33.58703804750185 25.017557430420172 22.338795189170824 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1399.0 1 2836.5 2 4274.0 3 11103.5 4 17933.0 5 13426.0 6 8919.0 7 9359.0 8 9799.0 9 10630.5 10 11462.0 11 11765.0 12 12068.0 13 12196.0 14 12324.0 15 11767.0 16 11210.0 17 10531.5 18 9853.0 19 10085.0 20 10317.0 21 11103.5 22 11890.0 23 11577.0 24 11264.0 25 14213.0 26 17784.0 27 18406.0 28 24831.5 29 31257.0 30 39042.0 31 46827.0 32 53194.5 33 59562.0 34 70480.0 35 81398.0 36 83589.5 37 85781.0 38 100815.0 39 115849.0 40 153218.5 41 190588.0 42 224240.0 43 257892.0 44 261534.5 45 265177.0 46 256695.0 47 248213.0 48 232233.0 49 216253.0 50 198685.5 51 181118.0 52 169141.0 53 157164.0 54 139632.0 55 122100.0 56 112731.0 57 103362.0 58 94553.0 59 85744.0 60 78878.5 61 72013.0 62 64312.5 63 56612.0 64 50238.0 65 43864.0 66 37867.5 67 31871.0 68 27707.5 69 23544.0 70 18814.5 71 14085.0 72 12005.0 73 9925.0 74 7981.0 75 4773.0 76 3509.0 77 2586.5 78 1664.0 79 1202.0 80 740.0 81 609.0 82 478.0 83 301.0 84 124.0 85 80.5 86 37.0 87 34.0 88 31.0 89 48.5 90 66.0 91 42.5 92 19.0 93 17.0 94 15.0 95 8.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2681201.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.419653808791578 #Duplication Level Percentage of deduplicated Percentage of total 1 80.12437267018566 12.354900882208641 2 7.603048733384295 2.3447275872031423 3 2.682694957883137 1.24098682575446 4 1.3779760266487968 0.849916531509544 5 0.8237827865612606 0.635122269120814 6 0.5530975081961164 0.5117143259333626 7 0.3851419644742058 0.41571290316011106 8 0.28621637454014803 0.35306859278532077 9 0.23136172303471822 0.3210765906420788 >10 2.8235589291475898 10.567086578351693 >50 1.2323984533014394 13.882579129028327 >100 1.857337753922457 53.62754857758457 >500 0.017062157825894885 1.6673303504422348 >1k 0.0014624706707909905 0.527801273866379 >5k 2.437451117984984E-4 0.31852992921865425 >10k+ 2.437451117984984E-4 0.3818976531906485 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10161 0.3789719606997014 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8475 0.31608969264146924 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3977 0.1483290510483921 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2865 0.1068550996363197 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02424286728223658 0.0 2 0.0 0.0 0.0 0.08104577016046167 0.0 3 3.7296718895748584E-5 0.0 0.0 0.1174473678027123 0.0 4 3.7296718895748584E-5 0.0 0.0 0.1935326743500394 0.0 5 7.459343779149717E-5 0.0 0.0 0.3241830806418467 0.0 6 7.459343779149717E-5 0.0 0.0 0.4965312186591009 0.0 7 7.459343779149717E-5 0.0 0.0 0.6016706692262161 0.0 8 7.459343779149717E-5 0.0 0.0 0.8804636429719368 0.0 9 7.459343779149717E-5 0.0 0.0 1.005482244710486 0.0 10 7.459343779149717E-5 0.0 0.0 1.1988284354660468 0.0 11 7.459343779149717E-5 0.0 0.0 1.3666263737780195 0.0 12 7.459343779149717E-5 0.0 0.0 1.523533670172434 0.0 13 1.1189015668724575E-4 0.0 0.0 1.5844765088480872 0.0 14 1.1189015668724575E-4 0.0 0.0 1.6062204959643085 0.0 15 1.1189015668724575E-4 0.0 0.0 1.6371021792099885 0.0 16 1.1189015668724575E-4 0.0 0.0 1.7136723431029601 0.0 17 1.1189015668724575E-4 0.0 0.0 1.8066530633100615 0.0 18 1.1189015668724575E-4 0.0 0.0 1.938459667887637 0.0 19 1.1189015668724575E-4 0.0 0.0 1.9996262868766645 0.0 20 1.1189015668724575E-4 0.0 0.0 2.0637393466584566 0.0 21 1.1189015668724575E-4 0.0 0.0 2.1585103093725535 0.0 22 1.1189015668724575E-4 0.0 0.0 2.256824460381747 0.0 23 1.1189015668724575E-4 0.0 0.0 2.3691994744146374 0.0 24 1.1189015668724575E-4 0.0 0.0 2.4569959506952297 0.0 25 1.1189015668724575E-4 0.0 0.0 2.528083496910526 0.0 26 1.1189015668724575E-4 0.0 0.0 2.6037212428311043 0.0 27 1.1189015668724575E-4 0.0 0.0 2.6736152940417375 0.0 28 1.1189015668724575E-4 0.0 0.0 2.748320621989922 0.0 29 1.1189015668724575E-4 0.0 0.0 2.8296274691826535 0.0 30 1.1189015668724575E-4 0.0 0.0 2.93633338194339 0.0 31 1.1189015668724575E-4 0.0 0.0 3.036512368897371 0.0 32 1.1189015668724575E-4 0.0 0.0 3.134901113344356 0.0 33 1.1189015668724575E-4 0.0 0.0 3.2257932172932953 0.0 34 1.1189015668724575E-4 0.0 0.0 3.3239581814269052 0.0 35 1.1189015668724575E-4 0.0 0.0 3.4536015763085275 0.0 36 1.1189015668724575E-4 0.0 0.0 3.560493972663743 0.0 37 1.1189015668724575E-4 0.0 0.0 3.671116040908533 0.0 38 1.1189015668724575E-4 0.0 0.0 3.78229755993676 0.0 39 1.1189015668724575E-4 0.0 0.0 3.896835783665604 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATC 20 7.0349703E-4 45.000004 7 CACTACG 20 7.0349703E-4 45.000004 1 CGTACGT 25 3.8922008E-5 45.000004 39 TATCGTG 80 0.0 45.000004 1 GGTCGAA 55 1.8189894E-12 44.999996 9 TATCGAT 60 3.6379788E-12 41.249996 31 TGCGTAT 55 6.184564E-11 40.90909 36 GCGCGAC 365 0.0 40.684933 9 GTGCAAC 45 1.9299478E-8 40.0 45 CGTTTTT 8510 0.0 39.8443 1 CGTATTA 40 3.4605182E-7 39.375004 30 TAGCCCG 40 3.4605182E-7 39.375004 29 TGTTGCG 200 0.0 39.375004 1 TAATGCG 80 0.0 39.375004 1 CTTAACG 120 0.0 39.374996 1 ATTATAC 2480 0.0 38.649193 42 GGCCTAT 950 0.0 38.605263 8 ATACGTA 35 6.2514064E-6 38.571426 43 ACCCGCT 330 0.0 38.181816 34 AGGGCGA 2935 0.0 38.17717 6 >>END_MODULE