##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545406_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3917462 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.296625212956755 31.0 31.0 33.0 30.0 34.0 2 31.636970569210373 31.0 31.0 34.0 30.0 34.0 3 31.724960701597105 31.0 31.0 34.0 30.0 34.0 4 35.43026301212367 37.0 35.0 37.0 33.0 37.0 5 35.282162532782706 37.0 35.0 37.0 33.0 37.0 6 35.34582160592751 37.0 35.0 37.0 33.0 37.0 7 35.85487772440422 37.0 35.0 37.0 35.0 37.0 8 35.89607888985267 37.0 35.0 37.0 35.0 37.0 9 37.57130815819018 39.0 37.0 39.0 35.0 39.0 10 36.87885932269413 39.0 37.0 39.0 32.0 39.0 11 36.51575331171049 39.0 35.0 39.0 32.0 39.0 12 35.599115447705685 37.0 35.0 39.0 31.0 39.0 13 35.179332945667376 37.0 35.0 39.0 30.0 39.0 14 36.11357353306809 38.0 35.0 40.0 30.0 41.0 15 36.408999244919286 38.0 35.0 40.0 31.0 41.0 16 36.59947869309262 38.0 35.0 40.0 32.0 41.0 17 36.56499999234198 38.0 35.0 40.0 31.0 41.0 18 36.489757909585336 38.0 35.0 40.0 31.0 41.0 19 36.44566175753587 37.0 35.0 40.0 31.0 41.0 20 36.281219575327086 37.0 35.0 40.0 31.0 41.0 21 36.07325840046438 37.0 34.0 40.0 30.0 41.0 22 35.99633767985497 37.0 34.0 40.0 30.0 41.0 23 35.967383474300455 37.0 34.0 40.0 30.0 41.0 24 35.89934401405808 36.0 34.0 40.0 30.0 41.0 25 35.82630846195828 36.0 34.0 40.0 30.0 41.0 26 35.71481050741526 36.0 34.0 40.0 30.0 41.0 27 35.67016399903815 36.0 34.0 40.0 30.0 41.0 28 35.68587187316686 36.0 34.0 40.0 30.0 41.0 29 35.72301377779797 36.0 34.0 40.0 30.0 41.0 30 35.649982565242496 36.0 34.0 40.0 30.0 41.0 31 35.46738041109269 36.0 34.0 40.0 29.0 41.0 32 35.2625564715114 36.0 34.0 40.0 29.0 41.0 33 35.093625924131494 36.0 34.0 40.0 28.0 41.0 34 34.930690584873574 36.0 34.0 40.0 27.0 41.0 35 34.77299333088617 36.0 34.0 40.0 27.0 41.0 36 34.60016000155203 36.0 33.0 40.0 25.0 41.0 37 34.51532905743566 36.0 33.0 40.0 25.0 41.0 38 34.51842417361036 35.0 33.0 40.0 25.0 41.0 39 34.47490900996615 36.0 33.0 40.0 25.0 41.0 40 34.28671088577247 36.0 33.0 40.0 24.0 41.0 41 34.314256271024455 35.0 33.0 40.0 24.0 41.0 42 34.2336464272021 35.0 33.0 40.0 24.0 41.0 43 34.15105136948361 35.0 33.0 40.0 24.0 41.0 44 34.08940456857016 35.0 33.0 40.0 23.0 41.0 45 34.045730628657026 35.0 33.0 40.0 23.0 41.0 46 34.023980066686036 35.0 33.0 40.0 23.0 41.0 47 33.98953480595345 35.0 33.0 40.0 23.0 41.0 48 33.97837987962615 35.0 33.0 40.0 23.0 41.0 49 33.94980729870513 35.0 33.0 39.0 24.0 41.0 50 33.804119861277535 35.0 33.0 39.0 24.0 41.0 51 33.61882412643696 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 5.0 12 5.0 13 9.0 14 25.0 15 126.0 16 347.0 17 992.0 18 2272.0 19 4536.0 20 7561.0 21 12125.0 22 17944.0 23 26087.0 24 37066.0 25 51620.0 26 67541.0 27 78561.0 28 86470.0 29 97703.0 30 115476.0 31 140882.0 32 174876.0 33 225241.0 34 381764.0 35 608257.0 36 263987.0 37 317510.0 38 448649.0 39 749469.0 40 355.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.70306131878242 23.712163640642846 29.287457032129478 14.297318008445265 2 30.46477540815967 25.399301894951375 31.156013766055672 12.979908930833279 3 28.538068780245986 25.392690471534884 31.91586797778766 14.153372770431469 4 25.03383568238824 28.496255994314684 31.64508041175639 14.824827911540686 5 22.53982297722352 32.28945169091621 30.527622220713308 14.643103111146964 6 21.087862498730043 39.96809669117403 28.8346893983911 10.109351411704823 7 86.67542914264389 4.511594496640938 6.993737271733587 1.8192390889815908 8 87.9182235845555 3.5333846250455014 6.5124818058222385 2.0359099845767488 9 82.96246396263703 5.353389515967226 8.577492264124068 3.106654257271672 10 52.06799708586834 19.767390213357526 16.664743652905887 11.499869047868238 11 46.93679223946525 21.492001709269932 18.764291778707744 12.80691427255708 12 40.18959213899203 21.76281480203254 24.267625314553147 13.779967744422281 13 20.926431449749863 40.86793949756245 24.284243216654048 13.921385836033636 14 16.278243413720414 42.715079303896246 27.08312167418599 13.923555608197349 15 15.141180693009911 23.362677161897167 47.96342632040847 13.532715824684452 16 15.810389481761405 19.035768566485135 46.11235539744866 19.0414865543048 17 16.817750880544597 19.191813475153047 29.032113138557563 34.958322505744796 18 20.446707587718784 23.76523371509411 35.422551641853836 20.365507055333275 19 29.247737438167874 24.339942544433104 26.468565617228705 19.943754400170313 20 31.432238525861898 22.153884326127475 26.30527111686087 20.10860603114976 21 21.983212600403014 28.586467462862437 28.748945107827467 20.681374828907085 22 22.85734998833428 24.951078019391126 25.32062850896831 26.87094348330628 23 19.57956452417407 30.81622744521836 24.786073228023653 24.81813480258392 24 20.000576904128234 22.908275817353175 39.98790543469216 17.103241843826435 25 16.95398704569438 25.53308749389273 36.38664523101947 21.12628022939342 26 16.681948669827555 34.39048036713566 28.74452898330603 20.183041979730753 27 17.83343399374391 35.04447522400983 28.38363205565236 18.7384587265939 28 15.394635608462826 29.692259937684145 37.29590740127154 17.617197052581492 29 15.370334160229252 25.11202406047589 37.33542278138244 22.182218997912422 30 18.607455541368363 31.187284011944467 31.24964581660269 18.955614630084476 31 27.789829231272694 27.35648744008238 26.206431613120944 18.64725171552398 32 29.02642067746924 26.224785332952816 27.72432763865993 17.02446635091802 33 28.482956567287697 28.00900174653896 24.93828912699089 18.56975255918245 34 19.89619809968801 27.596847142359003 28.023398823013473 24.48355593493951 35 20.06115183759281 26.51081235759275 30.853215678926816 22.57482012588763 36 29.893819008327334 24.56610938408592 26.77749011987863 18.762581487708115 37 20.72369814946514 33.13864946233046 28.621209344213167 17.516443043991238 38 20.819831819683255 32.67531376181824 25.073070268454423 21.431784150044084 39 20.590040184180474 31.94517266536344 27.329122784088266 20.135664366367816 40 23.781672930075644 25.894775750217867 26.827828834076755 23.495722485629727 41 17.534592549972405 24.968921204596242 27.437585865542534 30.058900379888815 42 21.390839272978273 25.388453034132812 25.806172465744403 27.414535227144516 43 21.582417391668383 26.03810834667956 26.854836115832136 25.52463814581992 44 19.200007555912478 30.249049001624012 29.418536797549027 21.13240664491449 45 17.392766030659644 37.65496640426888 23.199152920947284 21.75311464412418 46 21.257028147305576 33.50924654789249 26.02909741051732 19.204627894284616 47 21.778998749700698 27.826536670936434 26.738919228827235 23.65554535053563 48 22.178874996107172 25.324814892907703 31.242957812992188 21.253352297992937 49 21.566233444000222 24.75587510485105 32.229336238615716 21.448555212533012 50 19.287896091908486 33.89873341464448 25.967424827605218 20.845945665841814 51 18.66249117413264 33.667716496037485 24.846316313980836 22.823476015849035 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2050.0 1 3286.5 2 4523.0 3 14092.5 4 23662.0 5 18105.0 6 12548.0 7 13532.5 8 14517.0 9 16219.5 10 17922.0 11 18720.5 12 19519.0 13 19315.0 14 19111.0 15 18607.0 16 18103.0 17 16788.0 18 15473.0 19 16284.0 20 17095.0 21 15506.5 22 13918.0 23 14842.5 24 15767.0 25 18204.0 26 24229.0 27 27817.0 28 35019.0 29 42221.0 30 49250.0 31 56279.0 32 68106.5 33 79934.0 34 98600.5 35 117267.0 36 118329.5 37 119392.0 38 145728.5 39 172065.0 40 236223.0 41 300381.0 42 364037.0 43 427693.0 44 430708.0 45 433723.0 46 411368.0 47 389013.0 48 355459.5 49 321906.0 50 297337.0 51 272768.0 52 245702.5 53 218637.0 54 194950.0 55 171263.0 56 155663.5 57 140064.0 58 123637.0 59 107210.0 60 99446.5 61 91683.0 62 80404.5 63 69126.0 64 59525.5 65 49925.0 66 42108.5 67 34292.0 68 28029.0 69 21766.0 70 18115.0 71 14464.0 72 11766.0 73 9068.0 74 8624.5 75 5826.0 76 3471.0 77 2648.0 78 1825.0 79 1177.0 80 529.0 81 483.0 82 437.0 83 264.5 84 92.0 85 79.0 86 66.0 87 43.0 88 20.0 89 17.0 90 14.0 91 8.5 92 3.0 93 6.0 94 9.0 95 8.5 96 8.0 97 4.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3917462.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.207040428024815 #Duplication Level Percentage of deduplicated Percentage of total 1 79.77915392252378 12.132048190134334 2 8.330851258635914 2.533751837798755 3 2.959128386870329 1.3499875503255883 4 1.5122266954036967 0.9198596997336952 5 0.93899927246323 0.7139699949117114 6 0.6384977326758854 0.582579650040262 7 0.44915845458248455 0.4781259544197493 8 0.35183178357469497 0.42802561253475707 9 0.2652977206215496 0.3630953846659264 >10 2.245086553055718 7.589726412316085 >50 0.7999359950614675 8.868675723631204 >100 1.6546369420032188 56.16557553928266 >500 0.0719774663837512 6.5583713887700315 >1k 0.002879098655350048 0.6240046352975027 >5k 0.0 0.0 >10k+ 3.387174888647115E-4 0.6922024261377268 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 13738 0.3506862351185538 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13139 0.3353957230472178 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 4717 0.12040959172035363 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.552673133778962E-5 0.0 0.0 0.03624795849966126 0.0 2 2.552673133778962E-5 0.0 0.0 0.11949062939219321 0.0 3 2.552673133778962E-5 0.0 0.0 0.17227990979874214 0.0 4 2.552673133778962E-5 0.0 0.0 0.28689493350541756 0.0 5 2.552673133778962E-5 0.0 0.0 0.4836294519257621 0.0 6 2.552673133778962E-5 0.0 0.0 0.7254186511573054 0.0 7 5.105346267557924E-5 0.0 0.0 0.8794724747808658 0.0 8 5.105346267557924E-5 0.0 0.0 1.2579828470576102 0.0 9 5.105346267557924E-5 0.0 0.0 1.4073397521150173 0.0 10 5.105346267557924E-5 0.0 0.0 1.6552808935989678 0.0 11 7.658019401336886E-5 0.0 0.0 1.8759339592828215 0.0 12 7.658019401336886E-5 0.0 0.0 2.081424146552028 0.0 13 1.0210692535115848E-4 0.0 0.0 2.1603527998484733 0.0 14 1.0210692535115848E-4 0.0 0.0 2.1895809072302423 0.0 15 1.0210692535115848E-4 0.0 0.0 2.2308321050721105 0.0 16 1.0210692535115848E-4 0.0 0.0 2.3306671513342057 0.0 17 1.0210692535115848E-4 0.0 0.0 2.449162238204225 0.0 18 1.0210692535115848E-4 0.0 0.0 2.6265474942705254 0.0 19 1.276336566889481E-4 0.0 0.0 2.7057314148803484 0.0 20 1.5316038802673773E-4 0.0 0.0 2.7900717352204056 0.0 21 1.7868711936452734E-4 0.0 0.0 2.9107876477168126 0.0 22 1.7868711936452734E-4 0.0 0.0 3.0345922947050923 0.0 23 1.7868711936452734E-4 0.0 0.0 3.190892470686378 0.0 24 1.7868711936452734E-4 0.0 0.0 3.3066051438405784 0.0 25 1.7868711936452734E-4 0.0 0.0 3.4015645844171556 0.0 26 1.7868711936452734E-4 0.0 0.0 3.4984130031127294 0.0 27 1.7868711936452734E-4 0.0 0.0 3.5919684734657285 0.0 28 1.7868711936452734E-4 0.0 0.0 3.6873363417437104 0.0 29 1.7868711936452734E-4 0.0 0.0 3.7953399420338987 0.0 30 1.7868711936452734E-4 0.0 0.0 3.9371409346153197 0.0 31 1.7868711936452734E-4 0.0 0.0 4.07051810585527 0.0 32 1.7868711936452734E-4 0.0 0.0 4.191259545083016 0.0 33 1.7868711936452734E-4 0.0 0.0 4.313634695116379 0.0 34 1.7868711936452734E-4 0.0 0.0 4.441013084491949 0.0 35 2.0421385070231696E-4 0.0 0.0 4.604690485829856 0.0 36 2.2974058204010657E-4 0.0 0.0 4.740186375770843 0.0 37 2.2974058204010657E-4 0.0 0.0 4.88088971890474 0.0 38 2.552673133778962E-4 0.0 0.0 5.013475561473219 0.0 39 2.807940447156858E-4 0.0 0.0 5.150528582025812 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAC 20 7.035369E-4 45.000004 34 CCCGCTA 50 2.1827873E-11 45.0 31 CGTTTTT 12505 0.0 43.038784 1 TTGTACG 110 0.0 42.954544 1 TCGATAG 290 0.0 42.672413 1 TAACGCG 175 0.0 42.42857 1 GCGATCG 70 0.0 41.785713 9 AGAATCG 125 0.0 41.399998 39 GAACGTA 60 3.6379788E-12 41.250004 39 TCGAACA 60 3.6379788E-12 41.250004 39 GCGTATT 55 6.184564E-11 40.909092 19 CTACGAA 640 0.0 40.781254 11 TATATCG 50 1.0822987E-9 40.5 16 CCGTACA 50 1.0822987E-9 40.5 31 TAGGGCG 1965 0.0 39.732822 5 GTACGAC 40 3.461064E-7 39.375004 45 GCTACGA 660 0.0 39.204544 10 AGGGCGA 4085 0.0 39.106487 6 CTATACG 75 0.0 39.0 1 TGGGCGA 1970 0.0 38.83249 6 >>END_MODULE