##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545405_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5044713 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25013038402779 31.0 31.0 33.0 30.0 34.0 2 31.59028610745547 31.0 31.0 34.0 30.0 34.0 3 31.686866428278478 31.0 31.0 34.0 30.0 34.0 4 35.387998881204936 37.0 35.0 37.0 33.0 37.0 5 35.23764602664215 37.0 35.0 37.0 32.0 37.0 6 35.31026641158773 37.0 35.0 37.0 32.0 37.0 7 35.806335662702715 37.0 35.0 37.0 35.0 37.0 8 35.8458378107932 37.0 35.0 37.0 35.0 37.0 9 37.52716854259103 39.0 37.0 39.0 35.0 39.0 10 36.87087808563143 39.0 37.0 39.0 32.0 39.0 11 36.4936366052935 39.0 35.0 39.0 32.0 39.0 12 35.644750652812164 37.0 35.0 39.0 31.0 39.0 13 35.23712389584898 37.0 35.0 39.0 30.0 39.0 14 36.17835781738228 38.0 35.0 40.0 30.0 41.0 15 36.443203409192954 38.0 35.0 40.0 31.0 41.0 16 36.64306096303199 38.0 35.0 40.0 32.0 41.0 17 36.58908484982198 38.0 35.0 40.0 31.0 41.0 18 36.52185109440319 38.0 35.0 40.0 31.0 41.0 19 36.48256223892221 37.0 35.0 40.0 31.0 41.0 20 36.310825412664705 37.0 35.0 40.0 31.0 41.0 21 36.099730549587264 37.0 34.0 40.0 30.0 41.0 22 36.03478215708208 37.0 34.0 40.0 30.0 41.0 23 36.00104327044968 37.0 34.0 40.0 30.0 41.0 24 35.92778102540224 37.0 34.0 40.0 30.0 41.0 25 35.82567432478319 37.0 34.0 40.0 30.0 41.0 26 35.73442770678927 37.0 34.0 40.0 30.0 41.0 27 35.695215763513204 37.0 34.0 40.0 30.0 41.0 28 35.69075842372004 36.0 34.0 40.0 30.0 41.0 29 35.70555054370784 36.0 34.0 40.0 30.0 41.0 30 35.61100304417714 36.0 34.0 40.0 30.0 41.0 31 35.438068528378125 36.0 34.0 40.0 29.0 41.0 32 35.25882978873129 36.0 34.0 40.0 29.0 41.0 33 35.07171845058381 36.0 34.0 40.0 27.0 41.0 34 34.9033748797999 36.0 34.0 40.0 27.0 41.0 35 34.76270721446394 36.0 34.0 40.0 26.0 41.0 36 34.56424220763401 36.0 33.0 40.0 25.0 41.0 37 34.49279671608672 36.0 33.0 40.0 25.0 41.0 38 34.500503596537605 36.0 33.0 40.0 25.0 41.0 39 34.456057064098594 36.0 33.0 40.0 25.0 41.0 40 34.28432360770573 36.0 33.0 40.0 24.0 41.0 41 34.26057339634584 36.0 33.0 40.0 24.0 41.0 42 34.174312988667545 35.0 33.0 40.0 24.0 41.0 43 34.09357678028463 35.0 33.0 40.0 23.0 41.0 44 34.026132705666306 35.0 33.0 40.0 23.0 41.0 45 33.9784275141123 35.0 33.0 40.0 23.0 41.0 46 33.9548253785696 35.0 33.0 40.0 23.0 41.0 47 33.89733489298598 35.0 33.0 40.0 23.0 41.0 48 33.90711562778695 35.0 33.0 39.0 23.0 41.0 49 33.87540678726421 35.0 33.0 39.0 24.0 41.0 50 33.72344234449016 35.0 33.0 39.0 24.0 41.0 51 33.55664137880589 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 5.0 13 11.0 14 42.0 15 143.0 16 497.0 17 1359.0 18 3083.0 19 6029.0 20 10055.0 21 15877.0 22 23498.0 23 33915.0 24 47448.0 25 66031.0 26 86253.0 27 102394.0 28 113619.0 29 129782.0 30 152996.0 31 184824.0 32 229425.0 33 292284.0 34 482714.0 35 749678.0 36 353105.0 37 422581.0 38 581931.0 39 954674.0 40 457.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.17552713107762 24.22518387071772 29.823658947496124 13.775630050708534 2 30.210638345531255 25.781387365346653 30.166057018506304 13.841917270615792 3 27.952610981040944 24.8899788749132 32.621697210525156 14.535712933520697 4 25.213029958294953 27.67701552100189 32.03857186722019 15.071382653482962 5 22.479990437513493 32.3646558287855 30.705354298648903 14.449999435052103 6 20.372159922675483 39.86809556856852 28.76338059271162 10.99636391604438 7 85.41693055680274 5.000522329020502 7.466192824051636 2.1163542901251273 8 86.79254895174412 3.8389696301851064 6.983211929003691 2.3852694890670687 9 82.58342942403264 5.287258165132487 8.96802256144205 3.1612898493928197 10 50.83718340369412 23.17124879056549 14.99752314948343 10.994044656256957 11 43.2628972153619 21.022048231485122 21.452379947085195 14.26267460606778 12 38.927427586068816 21.38900666896214 26.228647695121605 13.454918049847434 13 21.105283888300484 41.16547363546747 24.050466300065036 13.678776176167009 14 15.341249343619745 41.73771629823143 27.473317114373007 15.447717243775811 15 13.916093938346938 23.14714434696285 48.57152428691186 14.365237427778348 16 15.648462063154039 18.565932293868848 45.366346906157 20.41925873682011 17 15.879614955300728 19.5402989228525 29.0715844489072 35.508501672939566 18 20.482711305876073 22.414119495003977 36.500153725296165 20.60301547382378 19 28.168064268472754 24.857826401620862 25.70576363809002 21.26834569181636 20 30.865878792311875 22.02969722955498 26.870983542572198 20.233440435560954 21 21.795055536360543 27.61863757165175 28.76338059271162 21.822926299276094 22 22.594308140026996 24.278051100231075 24.985881258259884 28.141759501482046 23 19.01154733678606 29.531134873282188 25.605619189833 25.851698600098754 24 18.927280897842948 22.634191479277412 40.82103382293502 17.617493799944615 25 16.693040813223668 26.13914805460687 36.442073116944414 20.725738015225048 26 17.17076868396676 33.55875745557775 27.283474798268998 21.98699906218649 27 16.8747756314383 34.63211881429132 28.372000547900345 20.121105006370037 28 15.369338156600781 28.872742611918657 37.24402161232958 18.513897619150978 29 15.476717902485234 23.282156982964146 36.77691872659555 24.464206387955073 30 18.03404871595272 30.970820342009546 31.996686431913968 18.998444510123765 31 26.73989580774962 28.2798843065998 25.790267949831836 19.189951935818748 32 28.495099721232904 25.80430244495574 27.09044102211563 18.61015681169573 33 27.8153385534519 27.911419341397618 24.387928510501986 19.885313594648498 34 18.838554343924024 27.03955606592486 28.406274053647852 25.715615536503268 35 19.116191545485343 26.86483849527218 30.819513419296594 23.19945653994588 36 28.928365201350402 26.040510134075024 25.870074273799126 19.161050390775454 37 19.3889523546731 33.32484920351267 29.248165356483113 18.03803308533112 38 19.07466291937718 32.328499163381544 26.938460126473 21.658377790768277 39 19.393095305917303 33.07944376617659 28.148974976376255 19.37848595152985 40 23.911726990217282 26.571719739061468 26.777440064479386 22.73911320624186 41 17.032049196852228 24.887560501459646 28.416899038656908 29.663491263031215 42 20.86687587579313 25.587778729929727 25.95941533244805 27.58593006182909 43 20.73485647250894 25.435718543354202 27.986646613989734 25.842778370147123 44 19.097102253388844 29.609870769655284 29.456105828022327 21.83692114893355 45 17.12341217429019 37.41768857812129 23.21547330839237 22.243425939196147 46 21.25167477317342 32.70796574552408 25.990774896411352 20.049584584891154 47 19.657213403418588 29.491846216028545 27.42629759116128 23.424642789391587 48 20.93244947730426 24.977317837506316 31.377265664072468 22.71296702111696 49 20.73477718157604 24.69298055211466 32.618783268740955 21.953458997568344 50 19.249994994759863 33.52987573326768 27.35993108032112 19.86019819165134 51 17.64889300937437 32.26653329931752 26.51246958944939 23.572104101858717 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3038.0 1 5142.5 2 7247.0 3 20327.5 4 33408.0 5 25324.0 6 17240.0 7 18677.5 8 20115.0 9 21833.5 10 23552.0 11 24863.0 12 26174.0 13 25528.0 14 24882.0 15 24112.0 16 23342.0 17 22585.5 18 21829.0 19 22090.5 20 22352.0 21 22177.5 22 22003.0 23 22560.0 24 23117.0 25 26149.5 26 37385.5 27 45589.0 28 51185.5 29 56782.0 30 64734.5 31 72687.0 32 96829.5 33 120972.0 34 148274.0 35 175576.0 36 180583.0 37 185590.0 38 216192.0 39 246794.0 40 308256.5 41 369719.0 42 432523.0 43 495327.0 44 496781.5 45 498236.0 46 488014.5 47 477793.0 48 448169.0 49 418545.0 50 383737.5 51 348930.0 52 306594.5 53 264259.0 54 240625.0 55 216991.0 56 197048.5 57 177106.0 58 160446.0 59 143786.0 60 132104.0 61 120422.0 62 109570.0 63 98718.0 64 85987.0 65 73256.0 66 61687.5 67 50119.0 68 42486.5 69 34854.0 70 27486.5 71 20119.0 72 17752.0 73 15385.0 74 12320.0 75 7530.5 76 5806.0 77 4138.0 78 2470.0 79 1695.5 80 921.0 81 834.0 82 747.0 83 541.5 84 336.0 85 219.0 86 102.0 87 61.5 88 21.0 89 15.5 90 10.0 91 7.0 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5044713.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.683510390939944 #Duplication Level Percentage of deduplicated Percentage of total 1 79.44103123551437 11.664732076136598 2 8.789778239930449 2.581296002401531 3 3.082659120843274 1.3579277169788402 4 1.5405151359659062 0.9048068002542258 5 0.9802854269805261 0.7197015626577776 6 0.6568930387742214 0.5787297456346439 7 0.47524266731708237 0.48847614506378756 8 0.34851599174954473 0.40939505490105443 9 0.2946882473314902 0.38943521476018345 >10 2.071578484043631 6.450922481943221 >50 0.6422742321119292 6.97672742814507 >100 1.505159616425975 50.790691686398084 >500 0.16291205232889655 14.19508151082583 >1k 0.008056840810901002 1.5333634771630749 >5k 0.0 0.0 >10k+ 4.0966987174072896E-4 0.9587130967360354 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19490 0.3863450705719037 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 16024 0.3176394772110921 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 12299 0.24379979594478418 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05841759481659314 0.0 2 0.0 0.0 0.0 0.19305359888659673 0.0 3 0.0 0.0 0.0 0.27284010012066096 0.0 4 0.0 0.0 0.0 0.4347125396429886 0.0 5 0.0 0.0 0.0 0.7199616707630345 0.0 6 0.0 0.0 0.0 1.057978917730305 0.0 7 0.0 0.0 0.0 1.2714895773059836 0.0 8 0.0 0.0 0.0 1.7719144775926796 0.0 9 0.0 0.0 0.0 1.9532528411427965 0.0 10 0.0 0.0 0.0 2.2266479777937813 0.0 11 0.0 0.0 0.0 2.4949288492724957 0.0 12 0.0 0.0 0.0 2.7392043908147006 0.0 13 0.0 0.0 0.0 2.8386550434088123 0.0 14 0.0 0.0 0.0 2.8762389456050323 0.0 15 0.0 0.0 0.0 2.9335662900942037 0.0 16 1.9822733225854474E-5 0.0 0.0 3.0519476529190066 0.0 17 1.9822733225854474E-5 0.0 0.0 3.1989530425219432 0.0 18 3.964546645170895E-5 0.0 0.0 3.4081423462543854 0.0 19 7.92909329034179E-5 0.0 0.0 3.5025976700755823 0.0 20 9.911366612927237E-5 0.0 0.0 3.601374349740015 0.0 21 9.911366612927237E-5 0.0 0.0 3.740807455250675 0.0 22 9.911366612927237E-5 0.0 0.0 3.8903105092400696 0.0 23 9.911366612927237E-5 0.0 0.0 4.071430822724702 0.0 24 9.911366612927237E-5 0.0 0.0 4.211359496566009 0.0 25 1.1893639935512684E-4 0.0 0.0 4.323258825625957 0.0 26 1.387591325809813E-4 0.0 0.0 4.430559280577508 0.0 27 1.585818658068358E-4 0.0 0.0 4.536947889800668 0.0 28 1.585818658068358E-4 0.0 0.0 4.64486284948222 0.0 29 1.585818658068358E-4 0.0 0.0 4.7766642027009265 0.0 30 1.7840459903269027E-4 0.0 0.0 4.954513765203293 0.0 31 1.7840459903269027E-4 0.0 0.0 5.105047601320432 0.0 32 1.7840459903269027E-4 0.0 0.0 5.2379590275997865 0.0 33 1.7840459903269027E-4 0.0 0.0 5.366212111571064 0.0 34 1.7840459903269027E-4 0.0 0.0 5.5045351440210775 0.0 35 1.7840459903269027E-4 0.0 0.0 5.698401474969934 0.0 36 1.7840459903269027E-4 0.0 0.0 5.845228459973838 0.0 37 1.7840459903269027E-4 0.0 0.0 5.994275591099038 0.0 38 1.9822733225854474E-4 0.0 0.0 6.1393185301126145 0.0 39 1.9822733225854474E-4 0.0 0.0 6.310884286182385 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTTCG 25 3.892692E-5 45.000004 28 GTCGACG 35 1.2130295E-7 45.0 14 CGCGATA 35 1.2130295E-7 45.0 11 ATCGCTA 20 7.035563E-4 45.0 13 ATCGTAC 30 2.1669712E-6 44.999996 11 GCGATAC 160 0.0 43.59375 9 TTACGCG 120 0.0 43.124996 1 AGTACGG 305 0.0 42.049183 2 CGTAAGG 650 0.0 41.884617 2 TACGGGA 1730 0.0 41.748554 4 CGTTTTT 16465 0.0 41.720314 1 GCTACGA 1475 0.0 41.64407 10 ACGGGAT 1655 0.0 41.057404 5 CGAATAT 1510 0.0 40.97682 14 CTCGACT 55 6.184564E-11 40.909092 13 TCGACTA 55 6.184564E-11 40.909092 14 GTCGATG 310 0.0 40.645164 1 GACGATT 100 0.0 40.500004 19 CTACGGG 1305 0.0 40.344826 3 TATTACG 335 0.0 40.298508 1 >>END_MODULE