##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545399_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3601833 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.252427028127066 31.0 31.0 33.0 30.0 34.0 2 31.60242743069987 31.0 31.0 34.0 30.0 34.0 3 31.67866722305004 31.0 31.0 34.0 30.0 34.0 4 35.41738609202592 37.0 35.0 37.0 33.0 37.0 5 35.28348954546199 37.0 35.0 37.0 33.0 37.0 6 35.34975747071005 37.0 35.0 37.0 33.0 37.0 7 35.813006599695214 37.0 35.0 37.0 35.0 37.0 8 35.8354249072625 37.0 35.0 37.0 35.0 37.0 9 37.485323445034794 39.0 37.0 39.0 35.0 39.0 10 36.83671425077176 39.0 37.0 39.0 32.0 39.0 11 36.51352214275342 39.0 35.0 39.0 32.0 39.0 12 35.96746351094012 37.0 35.0 39.0 31.0 39.0 13 35.72912514267041 37.0 35.0 39.0 30.0 39.0 14 36.7257501944149 39.0 35.0 41.0 31.0 41.0 15 36.87348580569949 39.0 35.0 41.0 31.0 41.0 16 36.97978390447308 38.0 35.0 41.0 32.0 41.0 17 36.92352949178932 38.0 35.0 41.0 31.0 41.0 18 36.78356492374855 38.0 35.0 40.0 31.0 41.0 19 36.73851869312097 38.0 35.0 40.0 31.0 41.0 20 36.58268081834999 38.0 35.0 40.0 31.0 41.0 21 36.397411262543265 38.0 35.0 40.0 31.0 41.0 22 36.365130198984794 38.0 35.0 40.0 30.0 41.0 23 36.2944808934784 38.0 35.0 40.0 30.0 41.0 24 36.22341513335016 38.0 35.0 40.0 30.0 41.0 25 36.1199989005598 38.0 35.0 40.0 30.0 41.0 26 36.042780439848265 38.0 35.0 40.0 30.0 41.0 27 35.98883540686089 38.0 34.0 40.0 30.0 41.0 28 35.942211646125735 38.0 35.0 40.0 30.0 41.0 29 35.90208374458227 38.0 35.0 40.0 30.0 41.0 30 35.77327321949685 37.0 34.0 40.0 29.0 41.0 31 35.58650886923408 37.0 34.0 40.0 29.0 41.0 32 35.37812052918611 37.0 34.0 40.0 27.0 41.0 33 35.1400470260559 37.0 34.0 40.0 27.0 41.0 34 34.882573400821194 37.0 34.0 40.0 25.0 41.0 35 34.7207177567644 37.0 33.0 40.0 24.0 41.0 36 34.58852784124083 37.0 33.0 40.0 24.0 41.0 37 34.54054449498353 37.0 33.0 40.0 24.0 41.0 38 34.50229785778519 37.0 33.0 40.0 24.0 41.0 39 34.424133212172805 37.0 33.0 40.0 23.0 41.0 40 34.29636215782353 37.0 33.0 40.0 23.0 41.0 41 34.212793041765124 36.0 33.0 40.0 23.0 41.0 42 34.10964111884143 36.0 33.0 40.0 23.0 41.0 43 34.04343010905836 36.0 33.0 40.0 23.0 41.0 44 33.99260015664247 36.0 33.0 40.0 23.0 41.0 45 33.951672662225036 36.0 33.0 40.0 23.0 41.0 46 33.91234712991968 36.0 33.0 40.0 23.0 41.0 47 33.84727970452822 36.0 33.0 40.0 23.0 41.0 48 33.79224828025064 35.0 33.0 40.0 23.0 41.0 49 33.72032101432798 36.0 33.0 40.0 23.0 41.0 50 33.59982458931327 35.0 33.0 40.0 22.0 41.0 51 33.43870912393773 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 3.0 13 8.0 14 38.0 15 147.0 16 438.0 17 1130.0 18 2373.0 19 4675.0 20 7935.0 21 12578.0 22 18361.0 23 26501.0 24 36932.0 25 52072.0 26 68320.0 27 77302.0 28 82371.0 29 90873.0 30 105439.0 31 125943.0 32 153210.0 33 193167.0 34 300174.0 35 421552.0 36 274827.0 37 332979.0 38 466460.0 39 745717.0 40 303.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.47764874162683 22.781372706619102 27.167417256713456 16.57356129504061 2 33.277084195741445 24.257870922943955 29.005509139374315 13.459535741940284 3 27.989498680255302 24.98669427483173 32.88886519724818 14.134941847664786 4 25.240537248673107 27.110668373575344 32.012616909223716 15.636177468527828 5 22.925493769422403 30.765085443994767 31.701636361263834 14.607784425318998 6 21.901376326997948 38.65923267403014 29.181947080833563 10.257443918138348 7 83.46897260367152 4.955782236433505 9.349378497004164 2.2258666628908115 8 84.3768436793155 4.041692105103151 9.212587035545512 2.368877180035832 9 79.13959364579091 5.770256422216133 11.232336424259536 3.8578135077334235 10 44.251107699885026 23.516609459683444 18.98941455642169 13.242868284009838 11 37.112159281121585 23.477712598002185 24.243683702159426 15.166444418716804 12 33.289022561567954 22.680923851827668 28.567398877182814 15.462654709421564 13 23.361521758504626 31.77021255566263 28.597494664522205 16.270771021310537 14 18.76536196986368 33.322561040448015 31.21871558176073 16.693361407927572 15 17.926122615901406 24.23690937364392 41.87281864539528 15.964149365059402 16 20.46169269924508 21.48164559545098 39.4563823475436 18.600279357760343 17 20.819732619474586 21.858425973663962 30.812228107188755 26.509613299672697 18 22.297480199665003 23.402306547804965 34.794394965008095 19.505818287521937 19 27.47315047643797 25.294926222287373 28.095944481601453 19.135978819673205 20 28.649468201329714 24.18576874608012 28.82712774301307 18.337635309577095 21 23.668698687584904 26.9661863834331 30.459990788023767 18.90512414095823 22 23.401112711222314 24.779577509562493 29.102987284529846 22.716322494685347 23 21.272085629733528 27.766140184733718 29.280036026101154 21.681738159431603 24 20.76623208238694 23.402584184219535 36.798596714506196 19.03258701888733 25 19.79755863195212 25.816577281622994 33.20956301971801 21.176301066706866 26 18.749980912496497 30.372063335529436 29.575968680391345 21.30198707158272 27 19.097553939896713 29.807517450142747 31.03222720209404 20.062701407866495 28 17.944918601167796 27.088707333182853 34.91408402332923 20.05229004232012 29 19.36427924337414 25.283793002063113 34.464923831837844 20.8870039227249 30 20.922541383789863 28.349315473538056 31.53039022075704 19.197752921915036 31 25.392737531140398 26.94677959805466 28.741032690854908 18.919450179950044 32 27.134211941530882 25.39840131399762 28.67837015208645 18.789016592385043 33 25.877879401960058 27.33791377890091 27.58159525996902 19.20261155917001 34 20.217566999913654 27.096592207356647 30.57079548107866 22.11504531165104 35 20.868985319419306 27.617216011958355 30.864007298506067 20.649791370116272 36 25.642332667838847 27.890215898405064 26.875454803151616 19.591996630604473 37 21.147177006818474 31.664377554428537 28.547186946202114 18.64125849255088 38 20.737496713478944 31.319192200193623 27.205425681868096 20.73788540445934 39 20.63230027599836 31.009821943438244 28.137312307372387 20.22056547319101 40 23.597651529096435 26.84930145289912 27.441055706913676 22.11199131109077 41 18.795402229920157 25.939709031484803 28.714934867885322 26.549953870709718 42 20.978040903062414 26.865682001358753 27.170221384500614 24.98605571107822 43 21.165501010180094 27.040815051669526 28.20849828406814 23.58518565408224 44 20.351693151792436 28.92699356133391 29.00431530279166 21.716997984081992 45 19.157106950821984 32.552314335506395 26.101210133840187 22.189368579831438 46 20.74935178838108 31.138006676045226 27.065830092622285 21.04681144295141 47 20.28078481151125 28.415281885639892 28.932435235059483 22.37149806778937 48 21.386138668838896 26.525160938888614 30.78635239335083 21.30234799892166 49 21.205369599312352 26.19494018739903 30.79817970461151 21.80151050867711 50 19.681756483434963 30.550250386400478 28.5727017327011 21.19529139746346 51 18.86167404207802 30.85168024169916 27.61885406680432 22.667791649418504 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2133.0 1 3807.5 2 5482.0 3 24954.5 4 44427.0 5 32243.5 6 20060.0 7 20447.0 8 20834.0 9 21906.0 10 22978.0 11 22893.0 12 22808.0 13 23138.5 14 23469.0 15 22149.0 16 20829.0 17 20604.0 18 20379.0 19 19497.0 20 18615.0 21 19737.0 22 20859.0 23 21660.5 24 22462.0 25 23514.5 26 30997.5 27 37428.0 28 44905.0 29 52382.0 30 59557.5 31 66733.0 32 76719.0 33 86705.0 34 101558.0 35 116411.0 36 126416.5 37 136422.0 38 152041.5 39 167661.0 40 193097.0 41 218533.0 42 253021.0 43 287509.0 44 288519.5 45 289530.0 46 287571.0 47 285612.0 48 271337.5 49 257063.0 50 249312.0 51 241561.0 52 225436.5 53 209312.0 54 192083.5 55 174855.0 56 167094.5 57 159334.0 58 146459.0 59 133584.0 60 121791.0 61 109998.0 62 99329.5 63 88661.0 64 77344.5 65 66028.0 66 54687.0 67 43346.0 68 36947.0 69 30548.0 70 26221.5 71 21895.0 72 17410.0 73 12925.0 74 10350.5 75 6412.0 76 5048.0 77 3747.5 78 2447.0 79 1830.5 80 1214.0 81 1028.5 82 843.0 83 592.5 84 342.0 85 215.5 86 89.0 87 94.0 88 99.0 89 56.0 90 13.0 91 9.5 92 6.0 93 9.0 94 12.0 95 7.5 96 3.0 97 2.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3601833.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.28008336304713 #Duplication Level Percentage of deduplicated Percentage of total 1 80.14152846173326 14.649938211224981 2 6.604088349628988 2.414465711362925 3 2.3619020451213455 1.2952729884050909 4 1.31954197324778 0.9648534908803649 5 0.9352337822522887 0.8548075751754853 6 0.6881403895281809 0.7547558211632923 7 0.510863571204435 0.6537040068132725 8 0.4296832132111185 0.628371596576096 9 0.3441159205657261 0.5661420943043859 >10 3.811502245893122 16.79438201380051 >50 1.5078083605548973 19.938959241960408 >100 1.341742437275567 39.06824546102379 >500 0.0026174898527258805 0.30740889473881666 >1k 9.23819948020899E-4 0.24087212242948114 >5k 1.539699913368165E-4 0.16631378493056836 >10k+ 1.539699913368165E-4 0.7015069852106085 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24924 0.6919809996743325 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5909 0.1640553573694283 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7763641457002588E-5 0.0 0.0 0.024737404538189307 0.0 2 2.7763641457002588E-5 0.0 0.0 0.0804035056594795 0.0 3 5.5527282914005176E-5 0.0 0.0 0.1211882949598163 0.0 4 5.5527282914005176E-5 0.0 0.0 0.19440101748193211 0.0 5 5.5527282914005176E-5 0.0 0.0 0.354458410481552 0.0 6 8.329092437100777E-5 0.0 0.0 0.6015825830903321 0.0 7 8.329092437100777E-5 0.0 0.0 0.7569756843251756 0.0 8 8.329092437100777E-5 0.0 0.0 1.0813383074673368 0.0 9 1.1105456582801035E-4 0.0 0.0 1.2490029382261754 0.0 10 1.1105456582801035E-4 0.0 0.0 1.4770534891539946 0.0 11 1.1105456582801035E-4 0.0 0.0 1.6692611789608236 0.0 12 1.3881820728501294E-4 0.0 0.0 1.8229329344253329 0.0 13 1.6658184874201554E-4 0.0 0.0 1.8972284389642717 0.0 14 1.6658184874201554E-4 0.0 0.0 1.9359031915138765 0.0 15 1.943454901990181E-4 0.0 0.0 1.9777707628310364 0.0 16 1.943454901990181E-4 0.0 0.0 2.0560364680983265 0.0 17 2.221091316560207E-4 0.0 0.0 2.145629739080074 0.0 18 2.221091316560207E-4 0.0 0.0 2.2662349975692933 0.0 19 2.498727731130233E-4 0.0 0.0 2.3332009007635834 0.0 20 2.498727731130233E-4 0.0 0.0 2.404192531969139 0.0 21 2.776364145700259E-4 0.0 0.0 2.49653440345513 0.0 22 3.0540005602702845E-4 0.0 0.0 2.6013143863138573 0.0 23 3.0540005602702845E-4 0.0 0.0 2.722530444915131 0.0 24 3.0540005602702845E-4 0.0 0.0 2.817870789678478 0.0 25 3.0540005602702845E-4 0.0 0.0 2.9031329325929325 0.0 26 3.0540005602702845E-4 0.0 0.0 2.9881174390928176 0.0 27 3.0540005602702845E-4 0.0 0.0 3.0730186546683314 0.0 28 3.0540005602702845E-4 0.0 0.0 3.1572535428488773 0.0 29 3.0540005602702845E-4 5.5527282914005176E-5 0.0 3.2578967431305115 0.0 30 3.0540005602702845E-4 5.5527282914005176E-5 0.0 3.388996658090478 0.0 31 3.3316369748403107E-4 5.5527282914005176E-5 0.0 3.4988851509772942 0.0 32 3.3316369748403107E-4 5.5527282914005176E-5 0.0 3.6109669715392134 0.0 33 3.3316369748403107E-4 5.5527282914005176E-5 0.0 3.7218271918770247 0.0 34 3.3316369748403107E-4 5.5527282914005176E-5 0.0 3.841183086500679 0.0 35 3.3316369748403107E-4 5.5527282914005176E-5 0.0 3.982028039612053 0.0 36 3.3316369748403107E-4 5.5527282914005176E-5 0.0 4.105076498549488 0.0 37 3.3316369748403107E-4 5.5527282914005176E-5 0.0 4.231789758159248 0.0 38 3.3316369748403107E-4 5.5527282914005176E-5 0.0 4.376216221018576 0.0 39 3.3316369748403107E-4 5.5527282914005176E-5 0.0 4.584915513850865 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCTA 20 7.0352934E-4 45.0 25 CGTTTTT 19175 0.0 42.195568 1 CGCATTA 55 6.184564E-11 40.909092 45 GTCCGAT 40 3.4609548E-7 39.375 38 GCGATCG 160 0.0 37.96875 9 AATACGG 210 0.0 37.5 2 ACGGGTA 475 0.0 37.42105 5 AGGGCGA 3825 0.0 37.411766 6 TAGTACG 115 0.0 37.173912 1 ATACTAT 2655 0.0 37.0339 45 ACGTAGG 295 0.0 36.61017 2 GGGCGAT 7020 0.0 36.05769 7 CGACGTC 100 0.0 36.0 18 ATCGTAC 50 4.8839865E-8 36.0 28 CGTTAGG 400 0.0 36.0 2 CGAATCG 25 0.0021077043 36.0 22 TCGTACT 50 4.8839865E-8 36.0 29 CGGTAGT 1565 0.0 35.79872 12 GCTACGA 390 0.0 35.76923 10 TAGGGCG 1695 0.0 35.44248 5 >>END_MODULE