##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545395_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4147715 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.290652564122656 31.0 31.0 33.0 30.0 34.0 2 31.636866322782545 31.0 31.0 34.0 30.0 34.0 3 31.727090940433467 31.0 31.0 34.0 30.0 34.0 4 35.446332257640655 37.0 35.0 37.0 33.0 37.0 5 35.31644170344394 37.0 35.0 37.0 33.0 37.0 6 35.376414483637376 37.0 35.0 37.0 33.0 37.0 7 35.827238612103294 37.0 35.0 37.0 35.0 37.0 8 35.844220733584635 37.0 35.0 37.0 35.0 37.0 9 37.494531085187866 39.0 37.0 39.0 35.0 39.0 10 36.88337916177944 39.0 37.0 39.0 32.0 39.0 11 36.53372423129362 39.0 35.0 39.0 32.0 39.0 12 35.85650581103089 37.0 35.0 39.0 31.0 39.0 13 35.5495961029145 37.0 35.0 39.0 30.0 39.0 14 36.571491532084536 38.0 35.0 41.0 31.0 41.0 15 36.75474640856471 38.0 35.0 41.0 31.0 41.0 16 36.894307106442945 38.0 35.0 41.0 32.0 41.0 17 36.83454528577783 38.0 35.0 41.0 32.0 41.0 18 36.743694781343464 38.0 35.0 40.0 31.0 41.0 19 36.68301317713488 38.0 35.0 40.0 31.0 41.0 20 36.52320398098712 38.0 35.0 40.0 31.0 41.0 21 36.343310473357015 38.0 35.0 40.0 31.0 41.0 22 36.27165535722681 38.0 35.0 40.0 30.0 41.0 23 36.21075363181897 38.0 35.0 40.0 30.0 41.0 24 36.12859369556491 37.0 35.0 40.0 30.0 41.0 25 36.00147671669823 37.0 34.0 40.0 30.0 41.0 26 35.89527607369359 37.0 34.0 40.0 30.0 41.0 27 35.85850594845596 37.0 34.0 40.0 30.0 41.0 28 35.85520605923985 37.0 34.0 40.0 30.0 41.0 29 35.834432452567256 37.0 34.0 40.0 30.0 41.0 30 35.73733079538975 37.0 34.0 40.0 30.0 41.0 31 35.5611340219856 37.0 34.0 40.0 29.0 41.0 32 35.3906808929736 37.0 34.0 40.0 29.0 41.0 33 35.18935365616972 37.0 34.0 40.0 27.0 41.0 34 34.99615041052724 37.0 34.0 40.0 27.0 41.0 35 34.832223766579915 37.0 34.0 40.0 26.0 41.0 36 34.676198340532075 36.0 33.0 40.0 25.0 41.0 37 34.60747761116663 36.0 33.0 40.0 25.0 41.0 38 34.576283809278124 36.0 33.0 40.0 25.0 41.0 39 34.496589085797844 36.0 33.0 40.0 24.0 41.0 40 34.33428309322121 36.0 33.0 40.0 23.0 41.0 41 34.280419459871275 36.0 33.0 40.0 23.0 41.0 42 34.186890613265376 36.0 33.0 40.0 23.0 41.0 43 34.11190788180962 35.0 33.0 40.0 23.0 41.0 44 34.05219741472112 35.0 33.0 40.0 23.0 41.0 45 34.00002941378566 35.0 33.0 40.0 23.0 41.0 46 33.95960233526171 35.0 33.0 40.0 23.0 41.0 47 33.88606425465588 35.0 33.0 40.0 23.0 41.0 48 33.84283949114151 35.0 33.0 40.0 23.0 41.0 49 33.776268137998876 35.0 33.0 39.0 24.0 41.0 50 33.65475930723302 35.0 33.0 39.0 23.0 41.0 51 33.493561394647415 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 2.0 13 12.0 14 52.0 15 167.0 16 432.0 17 1100.0 18 2607.0 19 5043.0 20 8573.0 21 13270.0 22 19907.0 23 28438.0 24 39803.0 25 54724.0 26 70294.0 27 81509.0 28 91278.0 29 103364.0 30 121598.0 31 147606.0 32 181528.0 33 230876.0 34 376133.0 35 559013.0 36 311025.0 37 370612.0 38 509080.0 39 819170.0 40 495.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.598113660171926 23.304831696488307 28.478837142860584 14.61821750047918 2 31.826656363805135 25.80825828196971 29.355729600514984 13.009355753710174 3 28.891883844478222 24.92953349012649 32.108787609563336 14.069795055831946 4 26.092776384105466 27.7389357754812 30.93985483573486 15.228433004678479 5 23.581827584585728 31.981633260723076 29.56859379200355 14.867945362687648 6 21.938055049587543 40.14875660454009 27.31638986767413 10.596798478198236 7 84.9356814535232 5.084413948402916 7.848875826810666 2.1310287712632134 8 85.69513575547018 4.155396405008541 7.725723681593359 2.4237441579279193 9 80.64734438118337 6.097767083803974 9.722437534883664 3.5324510001289866 10 47.866331220925254 23.879461341967804 15.707901820641004 12.546305616465933 11 41.58417345454063 22.09655195692086 21.943865477738946 14.375409110799561 12 37.3874772013024 21.957607984155132 25.642673134484887 15.012241680057572 13 22.073334353975625 34.54796195013399 25.617526758709314 17.761176937181077 14 17.064118436295647 37.04075617538813 28.480838244672068 17.41428714364415 15 16.86514140918554 23.64287324466604 43.11058016281253 16.381405183335886 16 18.372790801682374 19.5507405884927 42.174498488927036 19.90197012089789 17 17.996655990105396 20.714248688735847 30.0940879496301 31.19500737152866 18 21.879926658413126 23.05474218937415 34.181808537954026 20.883522614258695 19 29.495228095469432 24.15643312040485 26.14210474924145 20.206234034884268 20 31.778798687952282 22.258978738895998 26.28912545823423 19.67309711491749 21 23.885995059930586 27.872913158208796 26.985243682364867 21.255848099495747 22 23.45250336631133 25.06216073187285 25.892449216014118 25.5928866858017 23 22.198945684551617 29.182405252048415 25.870726412012395 22.74792265138757 24 21.389078082751585 22.874088504152287 36.84539559733492 18.891437815761208 25 19.38149077263023 25.50503108337964 33.4248616406865 21.688616503303628 26 18.51166244546696 32.27627742021812 28.068755929469603 21.143304204845318 27 19.170941108538074 32.19025415198489 28.079508837998752 20.559295901478283 28 17.526421174068133 28.31375829824373 35.03495298013485 19.124867547553293 29 18.56750041890535 24.32435690494646 34.6195917511208 22.488550925027397 30 20.09639042219632 29.581926434193285 30.268304355530695 20.0533787880797 31 27.211633393326206 26.884923385526733 26.004366259494688 19.89907696165238 32 28.942297144331274 25.91183338295905 26.06861850440544 19.077250968304234 33 27.167705592115176 27.562862925731395 24.840737610949642 20.428693871203784 34 21.09997914514377 26.54517005146207 28.589910348227882 23.76494045516628 35 21.63788977786564 26.083542384180202 29.895303799803024 22.383264038151125 36 27.619424188981164 27.859459967717164 25.17075064222108 19.350365201080592 37 21.815746742483512 32.014518837480395 27.792869085749622 18.376865334286467 38 21.29994466832943 31.46785639804085 25.701910570036755 21.530288363592966 39 22.070923387937697 30.75973156304134 26.687802802265825 20.48154224675514 40 24.35731481068492 26.598862265126705 26.631362087317957 22.41246083687042 41 18.83205572224707 25.194185232109728 28.27593024110866 27.697828804534545 42 21.937982720606406 26.54044455802773 24.21280150637158 27.30877121499428 43 21.94639699207877 26.152833548110227 27.024904073688766 24.87586538612224 44 21.50121211317557 28.790623270885295 27.68589452264681 22.02227009329233 45 18.919260363838887 34.35327644257139 24.046107314509314 22.68135587908041 46 20.93680496369688 32.53458832152161 25.263211189775575 21.265395525005935 47 21.681624701793638 27.612914580678762 27.29825940306892 23.407201314458685 48 22.374705108716487 24.742394306262604 30.281829875003464 22.601070710017442 49 20.873010802333333 25.742004935247483 30.837003024556896 22.547981237862295 50 19.46368060486316 31.51906531668642 27.36530836858367 21.65194570986676 51 19.120190273439714 31.432728622868254 25.90370842741124 23.543372676280796 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3269.0 1 5511.5 2 7754.0 3 22899.0 4 38044.0 5 28012.0 6 17980.0 7 18077.5 8 18175.0 9 19329.0 10 20483.0 11 20760.5 12 21038.0 13 21588.0 14 22138.0 15 21921.5 16 21705.0 17 20034.5 18 18364.0 19 19167.5 20 19971.0 21 20336.5 22 20702.0 23 20104.0 24 19506.0 25 21250.0 26 29712.5 27 36431.0 28 44396.5 29 52362.0 30 61748.0 31 71134.0 32 78645.0 33 86156.0 34 102215.0 35 118274.0 36 120231.0 37 122188.0 38 147439.0 39 172690.0 40 211815.5 41 250941.0 42 298162.5 43 345384.0 44 348301.0 45 351218.0 46 345341.0 47 339464.0 48 325891.0 49 312318.0 50 297427.0 51 282536.0 52 262643.0 53 242750.0 54 224589.0 55 206428.0 56 194820.0 57 183212.0 58 173672.5 59 164133.0 60 157461.5 61 150790.0 62 134604.0 63 118418.0 64 103273.5 65 88129.0 66 74083.0 67 60037.0 68 49551.0 69 39065.0 70 33522.5 71 27980.0 72 23828.5 73 19677.0 74 17588.0 75 12303.0 76 9107.0 77 7112.0 78 5117.0 79 3791.5 80 2466.0 81 1792.5 82 1119.0 83 715.0 84 311.0 85 210.0 86 109.0 87 105.5 88 102.0 89 67.0 90 32.0 91 19.5 92 7.0 93 7.0 94 7.0 95 3.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4147715.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.834103908721739 #Duplication Level Percentage of deduplicated Percentage of total 1 80.43269479700533 12.735796470742846 2 7.410485753479044 2.346768028693786 3 2.5085806618893884 1.1916338059129958 4 1.4138678754893628 0.8954932341480888 5 0.8510839637140971 0.6738075958247887 6 0.6289126374949677 0.5974960830962139 7 0.4541393111323724 0.5033622329053706 8 0.3499495795163945 0.44329104039008566 9 0.2833902356585216 0.40385073943207545 >10 2.724345379831741 10.250582443276873 >50 1.1575626689655731 13.318820870732212 >100 1.7622016562753746 53.13665382479292 >500 0.020014272575924058 2.0562945890525723 >1k 0.002309339143375853 0.6274779818168296 >5k 3.0791188578344704E-4 0.3087659719383047 >10k+ 1.5395594289172352E-4 0.5099050872440802 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20917 0.5043017661531711 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7119 0.1716366722400165 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5547 0.13373628612380553 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4348 0.1048288033290619 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02842528958715823 0.0 2 0.0 0.0 0.0 0.08766272513902233 0.0 3 0.0 0.0 0.0 0.1335192991803921 0.0 4 0.0 0.0 0.0 0.2360094654526649 0.0 5 0.0 0.0 0.0 0.3998587173901775 0.0 6 0.0 0.0 0.0 0.6712129449588509 0.0 7 0.0 0.0 0.0 0.8486841550106504 0.0 8 0.0 0.0 0.0 1.257150021156227 0.0 9 0.0 0.0 0.0 1.4509916906055502 0.0 10 0.0 0.0 0.0 1.7317486857221385 0.0 11 0.0 0.0 0.0 1.960814568985574 0.0 12 0.0 0.0 0.0 2.167072713530221 0.0 13 4.821932075853813E-5 0.0 0.0 2.2575321592732385 0.0 14 4.821932075853813E-5 0.0 0.0 2.296565699427275 0.0 15 4.821932075853813E-5 0.0 0.0 2.3419400802610593 0.0 16 4.821932075853813E-5 0.0 0.0 2.426950742758362 0.0 17 4.821932075853813E-5 0.0 0.0 2.5274398072191557 0.0 18 4.821932075853813E-5 0.0 0.0 2.67376133606094 0.0 19 4.821932075853813E-5 0.0 0.0 2.746717168368608 0.0 20 7.23289811378072E-5 0.0 0.0 2.8204445098084125 0.0 21 7.23289811378072E-5 0.0 0.0 2.916208080834869 0.0 22 7.23289811378072E-5 0.0 0.0 3.0240264820509606 0.0 23 7.23289811378072E-5 0.0 0.0 3.14773314945699 0.0 24 7.23289811378072E-5 0.0 0.0 3.246823853615786 0.0 25 7.23289811378072E-5 0.0 0.0 3.327109022678752 0.0 26 7.23289811378072E-5 0.0 0.0 3.400233622609075 0.0 27 7.23289811378072E-5 0.0 0.0 3.4799401598229385 0.0 28 9.643864151707626E-5 0.0 0.0 3.5600806709236292 0.0 29 9.643864151707626E-5 0.0 0.0 3.6515286127421964 0.0 30 9.643864151707626E-5 0.0 0.0 3.775669254035053 0.0 31 9.643864151707626E-5 0.0 0.0 3.88329477796811 0.0 32 1.446579622756144E-4 0.0 0.0 3.984458912919523 0.0 33 1.6876762265488347E-4 0.0 0.0 4.084658661455766 0.0 34 1.6876762265488347E-4 0.0 0.0 4.1900178773131715 0.0 35 1.9287728303415253E-4 0.0 0.0 4.323778273097356 0.0 36 1.9287728303415253E-4 0.0 0.0 4.441843279974637 0.0 37 1.9287728303415253E-4 0.0 0.0 4.5553515610402355 0.0 38 2.4109660379269067E-4 0.0 0.0 4.6721628655777945 0.0 39 2.6520626417195973E-4 0.0 0.0 4.7901555434739365 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 75 0.0 45.0 1 CGTATTA 50 2.1827873E-11 45.0 42 AATACGG 260 0.0 42.403843 2 TCGATAG 190 0.0 41.44737 1 TCGTTAA 45 1.9303116E-8 40.0 24 CGTTTTT 16665 0.0 39.828983 1 CGACGGT 415 0.0 39.578316 28 AGTCGAC 40 3.4611367E-7 39.375 30 TAGCATA 1540 0.0 39.15584 30 CGGTCTA 380 0.0 39.078945 31 CCCGTAA 35 6.252232E-6 38.57143 22 ACGTAAC 35 6.252232E-6 38.57143 37 GCGATAT 650 0.0 38.423073 9 AACGGGA 1080 0.0 38.125 4 GGCGATA 2155 0.0 38.00464 8 TAACGGG 1065 0.0 37.8169 3 TGGGCGA 2920 0.0 37.679794 6 GTTGATC 1645 0.0 37.613983 16 GGGCGAT 9525 0.0 37.58268 7 TCGTATC 30 1.1404353E-4 37.500004 42 >>END_MODULE