##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545393_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 434923 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.209933712404265 31.0 31.0 33.0 30.0 34.0 2 31.586430241674964 31.0 31.0 34.0 30.0 34.0 3 31.551313680812466 31.0 31.0 34.0 30.0 34.0 4 35.37441340191252 37.0 35.0 37.0 33.0 37.0 5 35.27889764395077 37.0 35.0 37.0 33.0 37.0 6 35.34822945670843 37.0 35.0 37.0 32.0 37.0 7 35.79036978959494 37.0 35.0 37.0 35.0 37.0 8 35.805287372707355 37.0 35.0 37.0 35.0 37.0 9 37.449753174699886 39.0 37.0 39.0 35.0 39.0 10 36.88795258011188 39.0 37.0 39.0 32.0 39.0 11 36.588281144018595 39.0 35.0 39.0 32.0 39.0 12 36.238478995132475 38.0 35.0 39.0 32.0 39.0 13 36.09007571455177 38.0 35.0 39.0 31.0 39.0 14 37.197630385148635 39.0 35.0 41.0 31.0 41.0 15 37.28429170220936 39.0 35.0 41.0 32.0 41.0 16 37.32274908432067 39.0 35.0 41.0 32.0 41.0 17 37.23192841031631 39.0 35.0 41.0 32.0 41.0 18 36.98049079952084 39.0 35.0 40.0 31.0 41.0 19 36.76571944918986 38.0 35.0 40.0 31.0 41.0 20 36.495956755563626 38.0 35.0 40.0 31.0 41.0 21 36.31991180047962 38.0 35.0 40.0 30.0 41.0 22 36.26940400944535 38.0 35.0 40.0 30.0 41.0 23 36.17654159471906 38.0 35.0 40.0 30.0 41.0 24 36.060654414689495 37.0 35.0 40.0 30.0 41.0 25 35.91611158756837 37.0 35.0 40.0 30.0 41.0 26 35.79375429673758 37.0 34.0 40.0 30.0 41.0 27 35.71868813560101 37.0 34.0 40.0 30.0 41.0 28 35.62132147529563 37.0 34.0 40.0 29.0 41.0 29 35.50915219475631 37.0 34.0 40.0 29.0 41.0 30 35.301221135695286 37.0 34.0 40.0 27.0 41.0 31 35.02543208797879 37.0 34.0 40.0 26.0 41.0 32 34.63410994589847 37.0 33.0 40.0 24.0 41.0 33 34.15234420805522 37.0 33.0 40.0 22.0 41.0 34 33.67949729032495 36.0 33.0 40.0 18.0 41.0 35 33.34760175939189 36.0 32.0 40.0 18.0 41.0 36 33.14706281341755 36.0 32.0 40.0 16.0 41.0 37 33.053345074875324 36.0 32.0 40.0 15.0 41.0 38 32.95292040200219 36.0 32.0 40.0 15.0 41.0 39 32.80904435957629 36.0 31.0 40.0 15.0 41.0 40 32.66988869294105 35.0 31.0 40.0 15.0 41.0 41 32.52157048489043 35.0 31.0 40.0 13.0 41.0 42 32.38054092333586 35.0 31.0 40.0 12.0 41.0 43 32.260057527424394 35.0 31.0 40.0 12.0 41.0 44 32.15023808812135 35.0 30.0 40.0 10.0 41.0 45 32.10116043529544 35.0 30.0 40.0 10.0 41.0 46 32.046624344999 35.0 30.0 39.0 10.0 41.0 47 31.98376264304256 35.0 30.0 39.0 10.0 41.0 48 31.900644481896794 35.0 30.0 39.0 10.0 41.0 49 31.820825755363593 35.0 30.0 39.0 10.0 41.0 50 31.690184239509062 35.0 30.0 39.0 10.0 41.0 51 31.536899635107822 35.0 29.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 0.0 13 1.0 14 5.0 15 33.0 16 62.0 17 191.0 18 440.0 19 875.0 20 1519.0 21 2272.0 22 3343.0 23 4572.0 24 6441.0 25 9497.0 26 12520.0 27 14082.0 28 13822.0 29 13394.0 30 13865.0 31 15415.0 32 18041.0 33 21874.0 34 31968.0 35 42789.0 36 35183.0 37 40852.0 38 54424.0 39 77415.0 40 26.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.43711185658151 21.387004136364368 24.623439091517348 23.552444915536775 2 40.301616607997275 22.26922926587005 25.44151493482754 11.987639191305128 3 26.286951943217534 23.00614131696875 37.679773201233324 13.027133538580394 4 23.56026239127386 25.21158917785447 37.55055492581445 13.677593505057217 5 21.561747711663905 28.453542351174804 36.11144961291999 13.873260324241302 6 19.865815328230514 36.78191312025347 33.753331049404146 9.598940502111867 7 76.8149764441062 4.315936384141561 16.835623777082382 2.033463394669861 8 77.3316196200247 3.6726041161309015 16.868503160329528 2.127273103514875 9 72.7016046518579 5.439353632711998 18.422341425953558 3.436700289476528 10 38.28884653145499 24.240382780400207 24.46938883434539 13.001381853799407 11 29.994044922894396 23.050516988064555 31.259556289274194 15.695881799766855 12 26.985006541387786 20.55444297036487 36.51312991035195 15.947420577895397 13 21.45736141799813 25.098465705423717 36.413801983339575 17.030370893238572 14 17.82913297296303 26.983397061088976 37.89107497189158 17.29639499405642 15 17.54563451461523 22.326480779356345 43.63186127199527 16.496023434033148 16 20.146324751737662 20.260367927196306 41.210513125311834 18.38279419575419 17 20.204725894008824 20.587782205125965 36.472433051367716 22.7350588494975 18 21.553010532898927 21.8486950563663 37.91199821577613 18.686296194958647 19 25.12697649928838 23.137428924200375 33.3677455549603 18.367849021550942 20 26.75646033895655 22.150587575271942 33.36015800498019 17.73279408079131 21 23.6802836364138 23.728568045378147 34.18421191797169 18.406936400236365 22 22.573421042345426 22.28923280672671 34.01360700629767 21.1237391446302 23 21.01061567219945 24.673332980780504 33.959114601895045 20.356936745124997 24 21.053841714510384 22.263021270431775 38.25481751942298 18.42831949563486 25 20.82506558632218 23.79593629217126 35.79461191981109 19.584386201695473 26 19.801206190521082 25.94298301078582 34.20329575580045 20.05251504289265 27 18.953239998804385 25.453011222676196 35.09402813831414 20.499720640205275 28 19.221793282948934 24.686438748927973 36.97390112732599 19.117866840797106 29 20.379239543551385 22.943141659558126 36.78858096720569 19.889037829684796 30 20.721828921441265 24.92119294679748 35.52996737353509 18.827010758226166 31 23.38459911294643 25.035925899527044 32.76855903228847 18.810915955238052 32 25.064666619148678 24.603665476417667 31.858282960432078 18.47338494400158 33 23.931592488785373 25.915161994192076 30.96961990973115 19.183625607291404 34 21.273190886662697 26.419159253477055 31.615711286825483 20.69193857303477 35 21.734651880907656 27.014437038280338 31.604674850490778 19.64623623032123 36 23.742823442310478 28.113712082368604 28.813146235080694 19.330318240240228 37 22.355681350491928 29.32840985645735 29.646167252594136 18.669741540456585 38 22.16162401160665 28.857981757690442 28.474235669302384 20.50615856140052 39 21.828001738238722 29.12124674942461 28.33191162573605 20.71883988660062 40 22.97992978067382 26.51319888807904 29.49901476813137 21.00785656311577 41 20.33624342699742 26.774624473757424 29.97473115930866 22.914400939936495 42 21.701772497660503 27.493142464298277 28.091409283942216 22.713675754099004 43 21.512543599671666 26.9328133945549 29.568912198251184 21.985730807522252 44 21.751896312680636 27.422555256907543 29.722272678152223 21.103275752259595 45 20.274393398371664 29.44291288342994 28.52964777673289 21.7530459414655 46 21.08120287959018 28.95156154077848 29.042152289025875 20.925083290605464 47 21.235712988276088 28.252817165337312 29.48314989090023 21.028319955486374 48 21.795352280748546 26.23935731152411 30.652322365108308 21.312968042619037 49 20.984404135904516 26.622873474155195 30.885467082679003 21.507255307261286 50 20.111835888191703 28.81061705175399 30.257769766142513 20.819777293911795 51 20.11091618516381 28.767161083686076 29.662721907096202 21.459200824053912 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 382.0 1 664.5 2 947.0 3 7626.5 4 14306.0 5 10121.5 6 5937.0 7 5982.0 8 6027.0 9 6347.5 10 6668.0 11 6636.0 12 6604.0 13 6548.5 14 6493.0 15 6051.5 16 5610.0 17 5211.5 18 4813.0 19 4489.0 20 4165.0 21 4051.0 22 3937.0 23 3845.5 24 3754.0 25 3788.5 26 3923.0 27 4023.0 28 4676.0 29 5329.0 30 5943.5 31 6558.0 32 7306.0 33 8054.0 34 9521.5 35 10989.0 36 11897.0 37 12805.0 38 13639.0 39 14473.0 40 17042.5 41 19612.0 42 21118.0 43 22624.0 44 23547.0 45 24470.0 46 25295.0 47 26120.0 48 25877.0 49 25634.0 50 24967.0 51 24300.0 52 23565.5 53 22831.0 54 22103.5 55 21376.0 56 20936.5 57 20497.0 58 20392.5 59 20288.0 60 19509.0 61 18730.0 62 17022.5 63 15315.0 64 13363.5 65 11412.0 66 10081.0 67 8750.0 68 7287.5 69 5825.0 70 5069.0 71 4313.0 72 3638.5 73 2964.0 74 2413.0 75 1477.5 76 1093.0 77 834.0 78 575.0 79 465.0 80 355.0 81 257.0 82 159.0 83 106.5 84 54.0 85 44.0 86 34.0 87 23.0 88 12.0 89 13.0 90 14.0 91 9.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 434923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.28276991540403 #Duplication Level Percentage of deduplicated Percentage of total 1 68.32459078652953 29.572775425774918 2 9.604450077953873 8.314144057761236 3 5.548301828257625 7.204376143610711 4 3.9309589315341777 6.805711639219853 5 2.9492820147335075 6.382654742967482 6 2.3325350074790063 6.057514562900343 7 1.7653333939374307 5.348596337964119 8 1.3427995190511435 4.649606610048467 9 0.9884518710046978 3.8504641414632257 >10 3.1897534851568135 18.586905655124042 >50 0.013911822577653958 0.41478334937571965 >100 0.009096191685386515 0.7885747094494768 >500 0.0 0.0 >1k 0.0 0.0 >5k 5.350700991403832E-4 2.0238926243403754 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8739 2.0093211901876886 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017934209043899724 0.0 2 0.0 0.0 0.0 0.050583666534076144 0.0 3 0.0 0.0 0.0 0.10507607093669454 0.0 4 0.0 0.0 0.0 0.16899543137520895 0.0 5 0.0 0.0 0.0 0.29062615681396475 0.0 6 0.0 0.0 0.0 0.5840114227116064 0.0 7 0.0 0.0 0.0 0.7661126222342806 0.0 8 0.0 0.0 0.0 1.0413337533310494 0.0 9 0.0 0.0 0.0 1.243208567953408 0.0 10 0.0 0.0 0.0 1.5441813838311609 0.0 11 0.0 0.0 0.0 1.6913338682939278 0.0 12 0.0 0.0 0.0 1.8210119952267412 0.0 13 0.0 0.0 0.0 1.8883802420198519 0.0 14 0.0 0.0 0.0 1.9286172494901397 0.0 15 0.0 0.0 0.0 1.9635659645500467 0.0 16 0.0 0.0 0.0 2.0040328977773076 0.0 17 0.0 0.0 0.0 2.054156712797438 0.0 18 0.0 0.0 0.0 2.1252037717021173 0.0 19 0.0 0.0 0.0 2.1670502594712167 0.0 20 0.0 0.0 0.0 2.214874816921616 0.0 21 2.299257569730734E-4 0.0 0.0 2.2666081122405575 0.0 22 2.299257569730734E-4 0.0 0.0 2.324089551483826 0.0 23 2.299257569730734E-4 0.0 0.0 2.384330099810771 0.0 24 2.299257569730734E-4 0.0 0.0 2.4335342118030088 0.0 25 2.299257569730734E-4 0.0 0.0 2.4827383237952465 0.0 26 2.299257569730734E-4 0.0 0.0 2.531252658516565 0.0 27 2.299257569730734E-4 0.0 0.0 2.5921829841144293 0.0 28 2.299257569730734E-4 0.0 0.0 2.650354200628617 0.0 29 2.299257569730734E-4 0.0 0.0 2.703926902003343 0.0 30 2.299257569730734E-4 0.0 0.0 2.7811819563462956 0.0 31 2.299257569730734E-4 0.0 0.0 2.8446414652708643 0.0 32 2.299257569730734E-4 0.0 0.0 2.909250602980298 0.0 33 2.299257569730734E-4 0.0 0.0 2.9738597406897314 0.0 34 2.299257569730734E-4 0.0 0.0 3.041687838996788 0.0 35 2.299257569730734E-4 0.0 0.0 3.127450146347744 0.0 36 2.299257569730734E-4 0.0 0.0 3.207694235531347 0.0 37 2.299257569730734E-4 0.0 0.0 3.2867886959300843 0.0 38 2.299257569730734E-4 0.0 0.0 3.3727809290380137 0.0 39 2.299257569730734E-4 0.0 0.0 3.487283956010604 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCGAG 35 1.2095916E-7 45.0 1 ACGGGTA 30 2.1623782E-6 44.999996 5 CGTTTTT 5810 0.0 43.141136 1 TTACGGG 110 0.0 40.909092 3 GTTACGG 45 1.9235813E-8 40.0 2 CGACAGG 40 3.4516052E-7 39.375004 2 CGAGGGA 190 0.0 39.078945 4 GTTGATC 265 0.0 39.056602 16 CAGTAGC 260 0.0 38.942307 27 GTAGGGC 220 0.0 38.863636 4 TCGTTGA 35 6.2393356E-6 38.571426 24 AATGGTC 70 0.0 38.571426 10 TTCGTAC 35 6.2393356E-6 38.571426 33 CCAGTAG 265 0.0 38.207546 26 AGCATAT 260 0.0 38.07692 31 CATACGA 130 0.0 38.07692 18 ATACGAA 130 0.0 38.07692 19 ACATACG 130 0.0 38.07692 17 GGTACCT 280 0.0 37.767857 8 AGTAGCA 275 0.0 37.636364 28 >>END_MODULE