##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545392_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 101000 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27412871287129 31.0 31.0 33.0 30.0 34.0 2 31.62957425742574 31.0 31.0 34.0 30.0 34.0 3 31.743039603960398 31.0 31.0 34.0 30.0 34.0 4 35.47017821782178 37.0 35.0 37.0 33.0 37.0 5 35.33132673267327 37.0 35.0 37.0 33.0 37.0 6 35.400415841584156 37.0 35.0 37.0 33.0 37.0 7 35.80243564356436 37.0 35.0 37.0 35.0 37.0 8 35.805554455445545 37.0 35.0 37.0 35.0 37.0 9 37.464564356435645 39.0 37.0 39.0 35.0 39.0 10 36.88932673267327 39.0 37.0 39.0 32.0 39.0 11 36.55039603960396 39.0 35.0 39.0 32.0 39.0 12 35.965455445544556 37.0 35.0 39.0 31.0 39.0 13 35.7329801980198 37.0 35.0 39.0 30.0 39.0 14 36.7789801980198 39.0 35.0 41.0 31.0 41.0 15 36.92878217821782 38.0 35.0 41.0 31.0 41.0 16 37.04422772277228 38.0 35.0 41.0 32.0 41.0 17 36.99106930693069 38.0 35.0 41.0 32.0 41.0 18 36.90814851485148 38.0 35.0 40.0 32.0 41.0 19 36.84371287128713 38.0 35.0 40.0 31.0 41.0 20 36.676742574257425 38.0 35.0 40.0 31.0 41.0 21 36.50437623762376 38.0 35.0 40.0 31.0 41.0 22 36.443633663366334 38.0 35.0 40.0 31.0 41.0 23 36.33760396039604 38.0 35.0 40.0 30.0 41.0 24 36.243752475247526 38.0 35.0 40.0 30.0 41.0 25 36.124465346534656 38.0 35.0 40.0 30.0 41.0 26 36.05040594059406 38.0 35.0 40.0 30.0 41.0 27 35.989930693069304 38.0 34.0 40.0 30.0 41.0 28 35.92824752475248 38.0 35.0 40.0 30.0 41.0 29 35.9239900990099 38.0 35.0 40.0 30.0 41.0 30 35.82618811881188 37.0 35.0 40.0 30.0 41.0 31 35.722900990099006 37.0 34.0 40.0 29.0 41.0 32 35.55970297029703 37.0 34.0 40.0 29.0 41.0 33 35.345257425742574 37.0 34.0 40.0 27.0 41.0 34 35.14177227722772 37.0 34.0 40.0 27.0 41.0 35 34.98677227722772 37.0 34.0 40.0 26.0 41.0 36 34.80158415841584 37.0 34.0 40.0 25.0 41.0 37 34.72972277227723 37.0 33.0 40.0 25.0 41.0 38 34.67546534653465 37.0 33.0 40.0 25.0 41.0 39 34.573613861386136 37.0 33.0 40.0 24.0 41.0 40 34.39863366336634 36.0 33.0 40.0 23.0 41.0 41 34.35720792079208 36.0 33.0 40.0 23.0 41.0 42 34.219683168316834 36.0 33.0 40.0 23.0 41.0 43 34.16830693069307 36.0 33.0 40.0 23.0 41.0 44 34.145455445544556 36.0 33.0 40.0 23.0 41.0 45 34.1130198019802 36.0 33.0 40.0 23.0 41.0 46 34.05269306930693 35.0 33.0 40.0 23.0 41.0 47 33.98457425742574 35.0 33.0 40.0 23.0 41.0 48 33.93152475247525 35.0 33.0 40.0 23.0 41.0 49 33.83461386138614 36.0 33.0 40.0 23.0 41.0 50 33.72119801980198 35.0 33.0 39.0 23.0 41.0 51 33.53921782178218 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 5.0 16 6.0 17 35.0 18 66.0 19 108.0 20 187.0 21 320.0 22 442.0 23 681.0 24 921.0 25 1274.0 26 1749.0 27 2042.0 28 2195.0 29 2516.0 30 2905.0 31 3466.0 32 4362.0 33 5407.0 34 8717.0 35 12567.0 36 7795.0 37 9526.0 38 13085.0 39 20612.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.45247524752475 23.292079207920793 28.879207920792076 15.376237623762377 2 30.694059405940592 25.87821782178218 29.906930693069306 13.520792079207922 3 27.475247524752476 25.725742574257428 33.05841584158416 13.740594059405941 4 25.684158415841583 27.73663366336634 31.716831683168316 14.862376237623762 5 22.904950495049505 32.30990099009901 30.10990099009901 14.675247524752475 6 21.898019801980197 40.63267326732673 27.384158415841586 10.085148514851486 7 85.01287128712872 5.068316831683169 7.931683168316832 1.9871287128712871 8 85.43861386138613 4.395049504950495 7.903960396039604 2.262376237623762 9 80.22178217821782 6.364356435643565 9.744554455445545 3.669306930693069 10 46.2 24.38217821782178 16.246534653465346 13.171287128712873 11 37.66237623762376 23.281188118811883 23.15148514851485 15.904950495049505 12 35.05148514851485 21.704950495049506 27.545544554455446 15.698019801980198 13 21.93069306930693 33.004950495049506 27.10693069306931 17.957425742574255 14 17.57920792079208 35.050495049504946 28.639603960396038 18.73069306930693 15 17.01881188118812 23.75148514851485 41.52970297029703 17.7 16 18.04059405940594 19.893069306930695 41.44158415841584 20.624752475247522 17 18.706930693069307 20.91980198019802 29.93069306930693 30.442574257425743 18 21.642574257425743 23.877227722772275 32.71386138613862 21.766336633663368 19 28.0950495049505 24.478217821782177 26.211881188118813 21.214851485148515 20 30.41980198019802 22.036633663366338 27.11782178217822 20.425742574257423 21 24.222772277227723 26.892079207920794 26.736633663366337 22.14851485148515 22 23.401980198019803 25.243564356435645 25.587128712871287 25.76732673267327 23 22.304950495049507 28.39207920792079 25.594059405940595 23.708910891089108 24 20.805940594059404 23.447524752475246 35.61188118811881 20.134653465346535 25 20.262376237623762 25.56831683168317 32.298019801980196 21.871287128712872 26 19.440594059405942 31.153465346534652 28.16138613861386 21.244554455445545 27 19.67920792079208 31.194059405940592 28.36237623762376 20.764356435643563 28 18.23861386138614 28.276237623762373 33.90396039603961 19.58118811881188 29 19.550495049504953 24.142574257425743 33.056435643564356 23.250495049504952 30 19.645544554455448 30.16336633663366 29.493069306930693 20.698019801980198 31 25.402970297029704 27.225742574257428 26.430693069306933 20.94059405940594 32 28.110891089108915 26.4970297029703 25.994059405940597 19.398019801980197 33 26.914851485148517 27.104950495049508 24.886138613861387 21.094059405940595 34 21.046534653465347 26.901980198019803 27.763366336633666 24.288118811881187 35 22.285148514851485 25.425742574257427 29.546534653465343 22.742574257425744 36 26.244554455445545 27.30792079207921 25.532673267326732 20.914851485148514 37 21.750495049504952 31.61881188118812 27.63960396039604 18.99108910891089 38 21.956435643564358 30.53861386138614 25.79009900990099 21.714851485148515 39 22.395049504950496 30.557425742574257 26.550495049504953 20.497029702970295 40 24.871287128712872 26.864356435643565 26.662376237623764 21.601980198019803 41 19.442574257425743 25.34851485148515 28.299009900990097 26.90990099009901 42 21.56930693069307 26.966336633663367 25.233663366336636 26.23069306930693 43 21.76831683168317 26.484158415841584 27.685148514851488 24.062376237623763 44 20.924752475247523 28.63069306930693 28.1 22.344554455445547 45 19.57128712871287 32.757425742574256 24.73168316831683 22.93960396039604 46 20.82079207920792 31.99108910891089 26.320792079207923 20.867326732673266 47 22.3 27.401980198019803 27.212871287128714 23.085148514851486 48 22.184158415841583 24.7019801980198 29.895049504950492 23.21881188118812 49 21.006930693069307 26.83960396039604 29.724752475247524 22.42871287128713 50 19.93861386138614 31.426732673267328 27.70891089108911 20.925742574257423 51 20.417821782178216 30.76930693069307 25.833663366336634 22.97920792079208 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 87.0 1 132.5 2 178.0 3 589.0 4 1000.0 5 727.5 6 455.0 7 462.0 8 469.0 9 496.0 10 523.0 11 551.0 12 579.0 13 561.0 14 543.0 15 514.0 16 485.0 17 464.0 18 443.0 19 434.5 20 426.0 21 502.5 22 579.0 23 559.5 24 540.0 25 631.5 26 840.5 27 958.0 28 1156.0 29 1354.0 30 1595.0 31 1836.0 32 2046.0 33 2256.0 34 2656.5 35 3057.0 36 3125.5 37 3194.0 38 3615.0 39 4036.0 40 5192.0 41 6348.0 42 6934.0 43 7520.0 44 7915.5 45 8311.0 46 7803.5 47 7296.0 48 7194.5 49 7093.0 50 6938.0 51 6783.0 52 6433.0 53 6083.0 54 5507.0 55 4931.0 56 4740.5 57 4550.0 58 4359.0 59 4168.0 60 4019.0 61 3870.0 62 3478.5 63 3087.0 64 2624.5 65 2162.0 66 1854.0 67 1546.0 68 1366.5 69 1187.0 70 1053.5 71 920.0 72 740.5 73 561.0 74 452.0 75 283.0 76 223.0 77 189.0 78 155.0 79 115.5 80 76.0 81 57.5 82 39.0 83 28.5 84 18.0 85 11.0 86 4.0 87 3.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 101000.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.556435643564356 #Duplication Level Percentage of deduplicated Percentage of total 1 63.69208032687125 29.015841584158412 2 11.881683039207164 10.825742574257426 3 7.35677649308876 10.054455445544555 4 5.0269494914370165 9.16039603960396 5 3.6273146135790664 8.262376237623762 6 2.6014952621055376 7.11089108910891 7 1.897331131009302 6.05049504950495 8 1.1823002694949145 4.308910891089108 9 0.9258454316265322 3.796039603960396 >10 1.7886638268277841 10.037623762376239 >50 0.010866730418151786 0.300990099009901 >100 0.006520038250891072 0.49207920792079207 >500 0.0021733460836303575 0.5841584158415841 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 590 0.5841584158415841 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 202 0.2 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 189 0.18712871287128713 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 106 0.10495049504950496 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02277227722772277 0.0 2 0.0 0.0 0.0 0.07920792079207921 0.0 3 0.0 0.0 0.0 0.11485148514851486 0.0 4 0.0 0.0 0.0 0.1900990099009901 0.0 5 0.0 0.0 0.0 0.3207920792079208 0.0 6 0.0 0.0 0.0 0.5633663366336633 0.0 7 0.0 0.0 0.0 0.691089108910891 0.0 8 0.0 0.0 0.0 0.9742574257425742 0.0 9 0.0 0.0 0.0 1.1445544554455445 0.0 10 0.0 0.0 0.0 1.388118811881188 0.0 11 0.0 0.0 0.0 1.5653465346534654 0.0 12 0.0 0.0 0.0 1.7237623762376237 0.0 13 0.0 0.0 0.0 1.7900990099009901 0.0 14 0.0 0.0 0.0 1.8227722772277228 0.0 15 0.0 0.0 0.0 1.8584158415841585 0.0 16 0.0 0.0 0.0 1.9247524752475247 0.0 17 0.0 0.0 0.0 1.998019801980198 0.0 18 0.0 0.0 0.0 2.091089108910891 0.0 19 0.0 0.0 0.0 2.1405940594059407 0.0 20 0.0 0.0 0.0 2.199009900990099 0.0 21 0.0 0.0 0.0 2.271287128712871 0.0 22 0.0 0.0 0.0 2.3386138613861385 0.0 23 0.0 0.0 0.0 2.4326732673267326 0.0 24 0.0 0.0 0.0 2.493069306930693 0.0 25 0.0 0.0 0.0 2.5722772277227723 0.0 26 0.0 0.0 0.0 2.616831683168317 0.0 27 0.0 0.0 0.0 2.6861386138613863 0.0 28 0.0 0.0 0.0 2.758415841584158 0.0 29 0.0 0.0 0.0 2.8356435643564355 0.0 30 0.0 0.0 0.0 2.906930693069307 0.0 31 0.0 0.0 0.0 2.9673267326732673 0.0 32 0.0 0.0 0.0 3.0584158415841585 0.0 33 0.0 0.0 0.0 3.122772277227723 0.0 34 0.0 0.0 0.0 3.207920792079208 0.0 35 0.0 0.0 0.0 3.299009900990099 0.0 36 0.0 0.0 0.0 3.398019801980198 0.0 37 0.0 0.0 0.0 3.4742574257425742 0.0 38 0.0 0.0 0.0 3.5495049504950495 0.0 39 0.0 0.0 0.0 3.627722772277228 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATGC 20 7.0027326E-4 45.000004 8 ACGCCGG 20 7.0027326E-4 45.000004 27 CCCTCGT 20 7.0027326E-4 45.000004 14 CCTAGGG 20 7.0027326E-4 45.000004 3 TATGGGT 20 7.0027326E-4 45.000004 4 TGGGTCA 20 7.0027326E-4 45.000004 6 GGCAAGT 20 7.0027326E-4 45.000004 2 ATAGCGG 20 7.0027326E-4 45.000004 2 TACGGGA 40 6.708433E-9 45.000004 4 GCCGATT 20 7.0027326E-4 45.000004 9 ACGGCGA 30 2.1458236E-6 45.000004 16 CTTGCGG 20 7.0027326E-4 45.000004 2 GGTATGC 30 2.1458236E-6 45.000004 8 GCGATGT 20 7.0027326E-4 45.000004 9 GCAGGGC 30 2.1458236E-6 45.000004 4 TAGATGG 20 7.0027326E-4 45.000004 2 TCTCACT 40 6.708433E-9 45.000004 44 TAGTGGT 20 7.0027326E-4 45.000004 15 CGGTAGT 20 7.0027326E-4 45.000004 12 CGGTAGG 20 7.0027326E-4 45.000004 31 >>END_MODULE