##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545391_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2851143 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.320488660161907 31.0 31.0 33.0 30.0 34.0 2 31.67108489472468 31.0 31.0 34.0 30.0 34.0 3 31.77050642496711 31.0 31.0 34.0 30.0 34.0 4 35.476058899886816 37.0 35.0 37.0 33.0 37.0 5 35.340550438894155 37.0 35.0 37.0 33.0 37.0 6 35.41030702423554 37.0 35.0 37.0 33.0 37.0 7 35.87087494383832 37.0 35.0 37.0 35.0 37.0 8 35.90786887925299 37.0 35.0 37.0 35.0 37.0 9 37.589410632858474 39.0 37.0 39.0 35.0 39.0 10 36.88547785923049 39.0 37.0 39.0 32.0 39.0 11 36.54700167616987 39.0 35.0 39.0 32.0 39.0 12 35.68996714650931 37.0 35.0 39.0 31.0 39.0 13 35.31648395047179 37.0 35.0 39.0 30.0 39.0 14 36.296023384305876 38.0 35.0 40.0 31.0 41.0 15 36.55198809740514 38.0 35.0 40.0 31.0 41.0 16 36.73949956210544 38.0 35.0 41.0 32.0 41.0 17 36.702310266444016 38.0 35.0 40.0 32.0 41.0 18 36.62620184255928 38.0 35.0 40.0 31.0 41.0 19 36.57089244559112 37.0 35.0 40.0 31.0 41.0 20 36.417560957131926 37.0 35.0 40.0 31.0 41.0 21 36.21751066151364 37.0 35.0 40.0 31.0 41.0 22 36.14047103214395 37.0 35.0 40.0 30.0 41.0 23 36.089912361463455 37.0 34.0 40.0 31.0 41.0 24 36.02684607541607 37.0 34.0 40.0 31.0 41.0 25 35.90985334653506 37.0 34.0 40.0 30.0 41.0 26 35.82136006506864 37.0 34.0 40.0 30.0 41.0 27 35.78489293592079 37.0 34.0 40.0 30.0 41.0 28 35.796900400997075 37.0 34.0 40.0 30.0 41.0 29 35.81104490374562 36.0 34.0 40.0 30.0 41.0 30 35.725948154827734 36.0 34.0 40.0 30.0 41.0 31 35.5475309375924 36.0 34.0 40.0 30.0 41.0 32 35.35392297054199 36.0 34.0 40.0 29.0 41.0 33 35.18916588890841 36.0 34.0 40.0 28.0 41.0 34 35.02249027846025 36.0 34.0 40.0 27.0 41.0 35 34.87332343554848 36.0 34.0 40.0 27.0 41.0 36 34.70723460731363 36.0 34.0 40.0 25.0 41.0 37 34.63615293936502 36.0 33.0 40.0 25.0 41.0 38 34.62343523281715 36.0 33.0 40.0 26.0 41.0 39 34.55309432041816 36.0 33.0 40.0 25.0 41.0 40 34.41066091739348 36.0 33.0 40.0 24.0 41.0 41 34.392085910808404 36.0 33.0 40.0 24.0 41.0 42 34.32279299915858 35.0 33.0 40.0 24.0 41.0 43 34.23903606378214 35.0 33.0 40.0 24.0 41.0 44 34.20741751641359 35.0 33.0 40.0 24.0 41.0 45 34.15396421715782 35.0 33.0 40.0 24.0 41.0 46 34.14289251714137 35.0 33.0 40.0 24.0 41.0 47 34.08364540116017 35.0 33.0 40.0 24.0 41.0 48 34.053337205464615 35.0 33.0 40.0 24.0 41.0 49 34.01110256483102 35.0 33.0 39.0 24.0 41.0 50 33.86290375473977 35.0 33.0 39.0 24.0 41.0 51 33.681869692260264 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 6.0 13 7.0 14 28.0 15 97.0 16 228.0 17 623.0 18 1432.0 19 2844.0 20 5283.0 21 8233.0 22 12409.0 23 17905.0 24 25207.0 25 35612.0 26 46872.0 27 54600.0 28 60559.0 29 68849.0 30 83042.0 31 100781.0 32 125787.0 33 163934.0 34 277147.0 35 431121.0 36 198097.0 37 239053.0 38 338384.0 39 552701.0 40 300.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.686044158430498 24.6858891328846 29.647723737462485 14.980342971222418 2 29.367064366817097 26.636510339888247 30.593554935687195 13.402870357607458 3 28.303034958260596 25.89673685255352 32.775767472904725 13.024460716281155 4 25.490478730810768 28.58997251277821 31.632857418936894 14.286691337474128 5 22.68290296207521 32.721508531841444 30.768011285298563 13.827577220784788 6 20.570206404940052 41.40504352114222 27.47129835297633 10.553451720941391 7 86.76927113091135 4.659324348164929 6.9479503483339835 1.6234541725897298 8 88.49265014066289 3.3695959830846784 6.444362839745323 1.693391036507113 9 83.91055797622217 5.165752822639902 8.233224359493718 2.6904648416442107 10 52.000162741749534 18.506086857095557 17.350760729994953 12.142989671159953 11 46.33166417819099 22.177421476229007 17.683223885999404 13.807690459580597 12 38.61658289324667 21.523753806806603 25.153666441844553 14.705996858102171 13 20.803867080676067 39.517695184001646 25.34306416759875 14.335373567723542 14 16.136335497728453 41.361236528648334 27.66150277274763 14.84092520087558 15 15.374886492890747 23.997393326115176 46.737396195139986 13.890323985854094 16 16.08109449438348 19.20836660946154 46.08621875507472 18.62432014108026 17 16.872391177853935 19.611468102441723 29.864093102310196 33.652047617394146 18 21.73114431650745 22.50027445133408 35.47422910741411 20.294352124744357 19 29.611141917469592 23.201537067765454 26.814649423055947 20.37267159170901 20 31.22428443610159 22.60840652327856 25.838619809669318 20.328689230950534 21 22.024886159691043 28.460445512554088 28.21391280619737 21.300755521557495 22 22.163321867756196 24.363772704490795 26.492743436579648 26.98016199117336 23 19.284686878209897 30.725396797003867 25.586650687110396 24.403265637675837 24 20.06532117119345 24.22512655450814 38.31754492847254 17.392007345825867 25 17.163642791680388 24.795880108433703 37.594045616091506 20.446431483794395 26 16.669455022073603 34.08548782014792 29.670732053776327 19.57432510400215 27 17.575652992501603 34.249772810413226 30.042968732189163 18.13160546489601 28 16.61270585165318 28.399697945701075 37.868181287294256 17.11941491535149 29 16.84282408844453 24.957534574730207 36.37471007241657 21.824931264408693 30 18.206277271957248 31.136214493625893 30.855625270286335 19.801882964130527 31 28.40390678405117 26.531184160177162 26.296751864076967 18.768157191694698 32 28.61077118895825 25.451757417989906 28.603335574539756 17.334135818512085 33 28.503691326601295 27.198495480584455 25.183128310295206 19.114684882519047 34 20.267485706609595 27.29859568601084 28.020025652869744 24.413892954509823 35 21.026058671908075 25.67826306853076 31.47432450775005 21.821353751811117 36 30.278207722306455 24.69346504191477 26.77687509886386 18.251452136914914 37 20.914173719101427 32.41605208858342 29.336094331290997 17.333679861024155 38 21.645915339918062 33.37415906532924 24.286295005196163 20.693630589556538 39 21.529611106843817 31.54727770581833 27.477436242236884 19.445674945100965 40 24.492878820879906 26.17704548666973 25.62793237659423 23.702143315856134 41 18.029786650476666 24.459699145220004 27.879906409464557 29.63060779483877 42 21.393770849094558 26.07031636084195 25.75584598878415 26.780066801279347 43 21.766989589789077 26.17820291721601 26.671338477235267 25.383469015759648 44 19.19612590459335 30.702423554342946 28.84979813359063 21.251652407473074 45 18.245314247654363 37.38911026209489 23.63932640348099 20.726249086769762 46 22.07939061632475 32.97915958617298 26.047728928363117 18.89372086913915 47 22.13428088314055 27.56469949069549 26.783819682141512 23.517199944022448 48 23.157870369883234 24.87335780772834 31.27640388433691 20.69236793805151 49 22.53689134497989 24.040077961715706 31.986049103815557 21.436981589488845 50 20.65838156837451 32.49286338847262 26.441711271584765 20.407043771568105 51 19.643350052943678 33.82103247715039 24.539140969078016 21.996476500827914 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1522.0 1 2834.5 2 4147.0 3 11756.0 4 19365.0 5 14596.0 6 9827.0 7 10634.5 8 11442.0 9 12204.5 10 12967.0 11 13424.0 12 13881.0 13 13924.5 14 13968.0 15 13958.0 16 13948.0 17 13071.5 18 12195.0 19 12633.5 20 13072.0 21 12935.5 22 12799.0 23 12882.5 24 12966.0 25 14368.0 26 20911.0 27 26052.0 28 29780.5 29 33509.0 30 42157.0 31 50805.0 32 56974.0 33 63143.0 34 67878.5 35 72614.0 36 78143.0 37 83672.0 38 102671.5 39 121671.0 40 161726.0 41 201781.0 42 246066.5 43 290352.0 44 292122.0 45 293892.0 46 274772.0 47 255652.0 48 244441.0 49 233230.0 50 225165.0 51 217100.0 52 197190.5 53 177281.0 54 160134.0 55 142987.0 56 124798.0 57 106609.0 58 96230.5 59 85852.0 60 76347.5 61 66843.0 62 59928.5 63 53014.0 64 42993.5 65 32973.0 66 29073.0 67 25173.0 68 22258.0 69 19343.0 70 14836.5 71 10330.0 72 9248.0 73 8166.0 74 6508.0 75 4342.0 76 3834.0 77 2621.5 78 1409.0 79 1032.0 80 655.0 81 478.0 82 301.0 83 215.5 84 130.0 85 86.5 86 43.0 87 23.0 88 3.0 89 2.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2851143.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.623647066184231 #Duplication Level Percentage of deduplicated Percentage of total 1 80.54667956312184 12.584328938472503 2 7.100437104629433 2.2186944667673862 3 2.5172825469878273 1.1798740224000943 4 1.3371826662014592 0.8356668015900335 5 0.8301831635637724 0.648524437390434 6 0.5867970760678137 0.550074624957143 7 0.43194783714350343 0.47240203909722056 8 0.29876609318342506 0.3734252796192436 9 0.24690236598171675 0.3471763883313775 >10 2.957037061812107 11.226794756722 >50 1.3001197856655056 14.906172490592542 >100 1.8255975350796618 51.82440080332024 >500 0.019481497293840667 1.948087219746994 >1k 0.0011326451915023644 0.2296947124277018 >5k 2.2652903830047287E-4 0.2600257399393413 >10k+ 2.2652903830047287E-4 0.3946572786257786 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11151 0.39110630368241794 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7347 0.257686127984461 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.031601361278617034 0.0 2 0.0 0.0 0.0 0.09992483716179791 0.0 3 0.0 0.0 0.0 0.1420132206627307 0.0 4 0.0 0.0 0.0 0.22362961100162285 0.0 5 0.0 0.0 0.0 0.3770768425154403 0.0 6 0.0 0.0 0.0 0.5674215568984088 0.0 7 0.0 0.0 0.0 0.6777632689766876 0.0 8 0.0 0.0 0.0 0.9192453693132895 0.0 9 0.0 0.0 0.0 1.0315161323020277 0.0 10 0.0 0.0 0.0 1.2149513370602596 0.0 11 0.0 0.0 0.0 1.389092023795369 0.0 12 0.0 0.0 0.0 1.5426444762679388 0.0 13 7.014730583488798E-5 0.0 0.0 1.6065135982306045 0.0 14 7.014730583488798E-5 0.0 0.0 1.631205449884485 0.0 15 7.014730583488798E-5 0.0 0.0 1.6663141764548464 0.0 16 7.014730583488798E-5 0.0 0.0 1.738565901464781 0.0 17 7.014730583488798E-5 0.0 0.0 1.8242157618891792 0.0 18 7.014730583488798E-5 0.0 0.0 1.9440273602551679 0.0 19 7.014730583488798E-5 0.0 0.0 2.0020041085277027 0.0 20 7.014730583488798E-5 0.0 0.0 2.061980055016532 0.0 21 7.014730583488798E-5 0.0 0.0 2.151347722650179 0.0 22 7.014730583488798E-5 0.0 0.0 2.238295308232523 0.0 23 7.014730583488798E-5 0.0 0.0 2.3468833376649294 0.0 24 7.014730583488798E-5 0.0 0.0 2.4287101699213265 0.0 25 7.014730583488798E-5 0.0 0.0 2.502926019494638 0.0 26 7.014730583488798E-5 0.0 0.0 2.5732136199411957 0.0 27 1.0522095875233196E-4 0.0 0.0 2.642028126965221 0.0 28 1.0522095875233196E-4 0.0 0.0 2.718383469366496 0.0 29 1.4029461166977596E-4 0.0 0.0 2.798491692629938 0.0 30 1.4029461166977596E-4 0.0 0.0 2.9055014076810597 0.0 31 1.4029461166977596E-4 0.0 0.0 3.0065135280832984 0.0 32 1.4029461166977596E-4 0.0 0.0 3.0983012777682495 0.0 33 1.4029461166977596E-4 0.0 0.0 3.1885808603777503 0.0 34 1.4029461166977596E-4 0.0 0.0 3.284331932842372 0.0 35 1.4029461166977596E-4 0.0 0.0 3.395901222772762 0.0 36 2.1044191750466392E-4 0.0 0.0 3.493476125189091 0.0 37 2.1044191750466392E-4 0.0 0.0 3.597679948006817 0.0 38 2.1044191750466392E-4 0.0 0.0 3.698727142061973 0.0 39 2.1044191750466392E-4 0.0 0.0 3.797880358859587 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACTG 25 3.8922633E-5 45.000004 33 TACCCGC 20 7.0350466E-4 45.0 18 ACAATCG 40 6.8212103E-9 45.0 1 GTCGTAC 45 3.8562575E-10 45.0 9 GTACGTC 40 6.8212103E-9 45.0 9 GTCGATC 30 2.1666383E-6 44.999996 10 CGTTAGT 30 2.1666383E-6 44.999996 2 CACTACG 30 2.1666383E-6 44.999996 36 TGTTACG 215 0.0 43.953487 1 ATATACG 105 0.0 40.714283 1 ACGGGAT 505 0.0 40.54455 5 ATCGTTC 45 1.9299478E-8 40.0 28 ATCGTAC 45 1.9299478E-8 40.0 40 GTTACGG 435 0.0 39.827587 2 TCGTAAG 130 0.0 39.807693 1 CGTTTTT 9815 0.0 39.658684 1 TAATCCG 40 3.4606273E-7 39.375 1 CTAGCGA 35 6.251543E-6 38.57143 14 GGCACCG 1185 0.0 38.544304 8 GCGATAA 275 0.0 38.454544 9 >>END_MODULE