##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545389_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4949604 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25654092731459 31.0 31.0 33.0 30.0 34.0 2 31.629888168831283 31.0 31.0 34.0 30.0 34.0 3 31.60056865155273 31.0 31.0 34.0 30.0 34.0 4 35.39741401534345 37.0 35.0 37.0 33.0 37.0 5 35.30323577401344 37.0 35.0 37.0 33.0 37.0 6 35.37178246987032 37.0 35.0 37.0 33.0 37.0 7 35.821633609476635 37.0 35.0 37.0 35.0 37.0 8 35.846222243234 37.0 35.0 37.0 35.0 37.0 9 37.50029295272915 39.0 37.0 39.0 35.0 39.0 10 36.93388723623142 39.0 37.0 39.0 32.0 39.0 11 36.60910771851647 39.0 35.0 39.0 32.0 39.0 12 36.1778160434653 38.0 35.0 39.0 32.0 39.0 13 35.98747960442896 38.0 35.0 39.0 31.0 39.0 14 37.0243914462652 39.0 35.0 41.0 31.0 41.0 15 37.14910485768154 39.0 35.0 41.0 31.0 41.0 16 37.22882012379172 39.0 35.0 41.0 32.0 41.0 17 37.14919516793667 39.0 35.0 41.0 32.0 41.0 18 36.926817579749816 39.0 35.0 40.0 31.0 41.0 19 36.730167100236706 38.0 35.0 40.0 31.0 41.0 20 36.465080438758335 38.0 35.0 40.0 31.0 41.0 21 36.29142654644695 38.0 35.0 40.0 31.0 41.0 22 36.23859221869063 38.0 35.0 40.0 30.0 41.0 23 36.14881998640699 37.0 35.0 40.0 30.0 41.0 24 36.037674125041114 37.0 35.0 40.0 30.0 41.0 25 35.89774939570923 37.0 35.0 40.0 30.0 41.0 26 35.795931553312144 37.0 34.0 40.0 30.0 41.0 27 35.740363875574694 37.0 34.0 40.0 30.0 41.0 28 35.644768955253795 37.0 34.0 40.0 29.0 41.0 29 35.557323979857784 37.0 34.0 40.0 29.0 41.0 30 35.37166104601499 37.0 34.0 40.0 28.0 41.0 31 35.08908328827923 37.0 34.0 40.0 27.0 41.0 32 34.70199999838371 37.0 33.0 40.0 24.0 41.0 33 34.25685792237116 36.0 33.0 40.0 23.0 41.0 34 33.78864693013825 36.0 33.0 40.0 20.0 41.0 35 33.45614032961021 36.0 33.0 40.0 18.0 41.0 36 33.24592775502848 36.0 32.0 40.0 18.0 41.0 37 33.14462470128923 36.0 32.0 40.0 17.0 41.0 38 33.05697082029189 36.0 32.0 40.0 16.0 41.0 39 32.9250594593022 36.0 32.0 40.0 15.0 41.0 40 32.78478722742264 35.0 31.0 40.0 15.0 41.0 41 32.65840438952288 35.0 31.0 40.0 15.0 41.0 42 32.53718438889253 35.0 31.0 40.0 15.0 41.0 43 32.40302113057933 35.0 31.0 40.0 13.0 41.0 44 32.28955932636227 35.0 31.0 40.0 12.0 41.0 45 32.252759412672205 35.0 31.0 40.0 12.0 41.0 46 32.20763337834703 35.0 31.0 39.0 12.0 41.0 47 32.14167234388852 35.0 31.0 39.0 12.0 41.0 48 32.05890552052245 35.0 31.0 39.0 12.0 41.0 49 31.978902958701344 35.0 30.0 39.0 12.0 41.0 50 31.862794276067337 35.0 30.0 39.0 11.0 41.0 51 31.7003069336456 35.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 14.0 13 21.0 14 84.0 15 269.0 16 813.0 17 2175.0 18 5021.0 19 9543.0 20 15902.0 21 24381.0 22 35702.0 23 51085.0 24 72612.0 25 105762.0 26 139818.0 27 153826.0 28 149691.0 29 147060.0 30 156591.0 31 177408.0 32 206793.0 33 255969.0 34 383454.0 35 508593.0 36 385141.0 37 459306.0 38 615265.0 39 886959.0 40 342.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.18611185864566 21.343768107509206 25.392475842511846 23.077644191333285 2 39.824115222147064 22.12047670884378 25.904375380333455 12.1510326886757 3 26.957005045252103 22.59423178096672 37.66317467013523 12.785588503645947 4 24.001738320883852 25.460400468401108 37.05350973532428 13.484351475390758 5 21.690078640634685 28.34295430503127 36.07522945269965 13.891737601634393 6 20.39183336687137 36.692349529376486 33.474556752418984 9.441260351333156 7 77.79238500696218 4.334185118647875 15.846095970505925 2.027333903884028 8 78.19964991138684 3.726277900211815 15.797910297470263 2.2761618909310726 9 73.44120863002374 5.391320194504449 17.744328637200066 3.4231425382717484 10 40.516776695671005 23.19567383572504 23.89471965838075 12.392829810223201 11 32.91297647246123 22.991314052598955 29.94760792984651 14.148101545093306 12 28.745289522151673 21.015297385406996 34.630346185270575 15.609066907170755 13 21.925895485780277 26.36823067057486 35.55294524572067 16.1529285979242 14 18.777360774720563 27.99512849916882 36.55359095394298 16.67391977216763 15 18.489903434699016 21.756467790150484 43.187798458220094 16.565830316930406 16 20.762085209240983 19.796007923058088 41.316133573514165 18.125773294186768 17 20.51459066220247 20.686240757846484 35.481242539807226 23.317926040143817 18 22.556006500722077 21.645125549437893 37.271486769446604 18.52738118039342 19 25.92193234044582 23.289358098142802 32.64384383073878 18.144865730672596 20 27.251533658046178 22.058673784811873 32.917643512491104 17.772149044650845 21 24.179287878383807 23.262083188877334 34.18180525149083 18.376823681248037 22 22.87841613187641 22.385669641450104 33.65942002632938 21.076494200344108 23 20.990749967068073 24.44516773463089 33.599051560488476 20.965030737812558 24 20.909935421096314 22.53669182423483 38.61856423261336 17.9348085220555 25 20.600395506387986 23.27931689080581 36.1698026751231 19.950484927683103 26 19.47115365188811 26.204621622255033 33.900227169688726 20.423997556168132 27 19.534896125023334 25.65225420053806 35.27195306937686 19.54089660506174 28 19.33302138918588 24.686762819813463 36.84064422123467 19.139571569765984 29 19.818595588657193 22.891811142871227 37.132849415832055 20.156743852639526 30 21.05679565476349 24.840047809885395 35.35127254624815 18.751883989102964 31 24.417872621728932 24.279336286296843 32.91855267613328 18.384238415840944 32 25.37223179874592 23.42460124082654 32.587031204920635 18.616135755506903 33 25.15876017556152 25.037437338421416 30.872853666677173 18.93094881933989 34 21.239638565024595 25.53497209069655 32.62780214336339 20.59758720091547 35 21.6133452292345 26.442438627413424 31.99761031387561 19.94660582947646 36 24.907043068495984 26.552245391752553 29.109177219026005 19.431534320725454 37 21.684522640599127 28.976944418179716 30.565334115618136 18.773198825603018 38 22.062795326656435 28.181830304000076 29.236419721658542 20.518954647684946 39 21.594939716389433 28.570386641032293 29.142654644694808 20.692018997883466 40 23.64639676224603 25.85366425273618 29.30996095849284 21.18997802652495 41 20.503276625766425 25.365423173247798 30.16184729121764 23.969452909768137 42 21.686704633340366 26.11291731621358 28.72732848930945 23.47304956113661 43 21.95438261323532 25.5408311452795 30.195951029617724 22.308835211867454 44 21.317260936430472 27.524929267068636 29.926293093346455 21.231516703154433 45 20.14639959075514 29.247228667182263 28.464984269448628 22.14138747261397 46 21.68666422606738 28.34620709050664 29.36628869703516 20.60083998639083 47 21.318190303709144 27.039132827595903 30.366631350710076 21.276045517984873 48 21.814331005066265 25.784810259568243 31.346871386074522 21.053987349290974 49 21.74113323005234 25.713410608202192 31.03318972588514 21.512266435860322 50 20.55645259701584 28.260503264503583 30.331699263213785 20.85134487526679 51 20.240952609542095 28.623259557734315 29.45284107577091 21.682946756952678 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3900.0 1 6920.5 2 9941.0 3 76466.5 4 142992.0 5 100943.5 6 58895.0 7 59071.0 8 59247.0 9 60712.5 10 62178.0 11 62375.0 12 62572.0 13 61572.5 14 60573.0 15 58130.5 16 55688.0 17 52313.0 18 48938.0 19 47304.5 20 45671.0 21 43988.0 22 42305.0 23 40827.5 24 39350.0 25 41315.0 26 46176.5 27 49073.0 28 56169.5 29 63266.0 30 66262.5 31 69259.0 32 83426.5 33 97594.0 34 114727.0 35 131860.0 36 142005.5 37 152151.0 38 167417.5 39 182684.0 40 211523.5 41 240363.0 42 271459.5 43 302556.0 44 319326.0 45 336096.0 46 331394.5 47 326693.0 48 309970.5 49 293248.0 50 286680.5 51 280113.0 52 264350.0 53 248587.0 54 242586.5 55 236586.0 56 229400.5 57 222215.0 58 213872.0 59 205529.0 60 196638.0 61 187747.0 62 169997.5 63 152248.0 64 140923.0 65 129598.0 66 113697.5 67 97797.0 68 84624.0 69 71451.0 70 61248.5 71 51046.0 72 43096.5 73 35147.0 74 29864.0 75 18393.5 76 12206.0 77 9755.5 78 7305.0 79 5311.0 80 3317.0 81 2725.5 82 2134.0 83 1468.5 84 803.0 85 611.0 86 419.0 87 316.0 88 213.0 89 167.0 90 121.0 91 79.0 92 37.0 93 31.5 94 26.0 95 15.5 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4949604.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.59385106325343 #Duplication Level Percentage of deduplicated Percentage of total 1 81.82801246838972 17.66981914044452 2 5.84357736799653 2.5237067872223107 3 2.057268203596701 1.3327302955690228 4 1.251152417232083 1.0806879582055644 5 0.8651145935885232 0.9340577843298793 6 0.6322656324003396 0.8191829939080006 7 0.5131372932314484 0.7756427199528628 8 0.40813549745426053 0.705057371652332 9 0.3633224719023921 0.7060978211573999 >10 3.830995088434509 20.050936695301957 >50 1.5656724607636494 24.358837154343586 >100 0.8367808830324808 26.107046713257702 >500 0.0027583966114963464 0.39016739613317697 >1k 0.0016169911168861073 0.6081320416721204 >5k 9.511712452271219E-5 0.11773212857554018 >10k+ 9.511712452271219E-5 1.820164998274114 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 88618 1.7904058587313247 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5732 0.11580724437753 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02163809468393835 0.0 2 0.0 0.0 0.0 0.0667730186091655 0.0 3 0.0 0.0 0.0 0.11536276437468533 0.0 4 0.0 0.0 0.0 0.1701954338165235 0.0 5 0.0 0.0 0.0 0.3033778055779816 0.0 6 0.0 0.0 0.0 0.6124934439199581 0.0 7 0.0 0.0 0.0 0.832086768961719 0.0 8 0.0 0.0 0.0 1.2536154407504116 0.0 9 0.0 0.0 0.0 1.5377189771141286 0.0 10 2.020363649293964E-5 0.0 0.0 1.833803269918159 0.0 11 2.020363649293964E-5 0.0 0.0 2.0489719985679664 0.0 12 4.040727298587928E-5 0.0 0.0 2.207449323218585 0.0 13 6.061090947881891E-5 0.0 0.0 2.29683021106335 0.0 14 6.061090947881891E-5 0.0 0.0 2.3501476077682173 0.0 15 6.061090947881891E-5 0.0 0.0 2.390857935301491 0.0 16 8.081454597175856E-5 0.0 0.0 2.448317077487411 0.0 17 8.081454597175856E-5 0.0 0.0 2.508544117872864 0.0 18 8.081454597175856E-5 0.0 0.0 2.592833689321408 0.0 19 1.2122181895763783E-4 0.0 0.0 2.6445549987433337 0.0 20 1.4142545545057746E-4 0.0 0.0 2.7001352027354106 0.0 21 1.4142545545057746E-4 0.0 0.0 2.766665777706661 0.0 22 1.4142545545057746E-4 0.0 0.0 2.840732309089778 0.0 23 1.4142545545057746E-4 0.0 0.0 2.9181930514037084 0.0 24 1.4142545545057746E-4 0.0 0.0 2.9871076554811253 0.0 25 1.4142545545057746E-4 0.0 0.0 3.0463649213149173 0.0 26 1.4142545545057746E-4 0.0 0.0 3.105500965329752 0.0 27 1.4142545545057746E-4 0.0 0.0 3.172375002121382 0.0 28 1.8183272843645673E-4 0.0 0.0 3.23779437708552 0.0 29 2.0203636492939638E-4 0.0 0.0 3.3163865230430556 0.0 30 2.0203636492939638E-4 0.0 0.0 3.414535789125756 0.0 31 2.0203636492939638E-4 0.0 0.0 3.4934107859941927 0.0 32 2.0203636492939638E-4 0.0 0.0 3.57531632833657 0.0 33 2.0203636492939638E-4 0.0 0.0 3.652595237922064 0.0 34 2.4244363791527565E-4 0.0 0.0 3.7399355584810423 0.0 35 2.626472744082153E-4 0.0 0.0 3.838468693657109 0.0 36 2.626472744082153E-4 0.0 0.0 3.923465392382906 0.0 37 2.626472744082153E-4 0.0 0.0 4.019048796631004 0.0 38 2.626472744082153E-4 0.0 0.0 4.139260433763994 0.0 39 2.828509109011549E-4 0.0 0.0 4.338427882311393 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 60920 0.0 42.857845 1 TCTAGCG 155 0.0 37.741936 1 GTTTTTT 71730 0.0 37.57842 2 GGGCGAT 11575 0.0 37.47732 7 GCCCTAC 3545 0.0 37.32017 26 AGGGCGA 5995 0.0 37.155964 6 CGTTAGG 510 0.0 36.61765 2 CTAATCC 3730 0.0 36.012066 11 TACGCTA 25 0.0021077802 36.0 1 TACGAAT 835 0.0 35.838326 12 GCGTTAG 245 0.0 35.816326 1 GGCGATA 2320 0.0 35.78664 8 CGTAAGG 750 0.0 35.7 2 ACTAATC 3770 0.0 35.68966 10 ATACTAT 3535 0.0 35.579914 45 TACACAA 3660 0.0 35.532787 30 TATGGGC 1895 0.0 35.50132 4 CCCTACA 3715 0.0 35.430687 27 TAGGGCG 2470 0.0 35.34413 5 ATCCTAG 3810 0.0 35.25591 14 >>END_MODULE