##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545388_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3214258 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.351285739974823 31.0 31.0 33.0 30.0 34.0 2 31.708256462300163 31.0 31.0 34.0 30.0 34.0 3 31.8103198312021 31.0 31.0 34.0 30.0 34.0 4 35.51979772625595 37.0 35.0 37.0 33.0 37.0 5 35.39025803155814 37.0 35.0 37.0 33.0 37.0 6 35.45215940973002 37.0 35.0 37.0 33.0 37.0 7 35.84347833932435 37.0 35.0 37.0 35.0 37.0 8 35.864942079945045 37.0 35.0 37.0 35.0 37.0 9 37.52622564834559 39.0 37.0 39.0 35.0 39.0 10 36.974911161456234 39.0 37.0 39.0 33.0 39.0 11 36.62276705852486 39.0 35.0 39.0 32.0 39.0 12 35.82879501272144 37.0 35.0 39.0 31.0 39.0 13 35.480173340161244 37.0 35.0 39.0 30.0 39.0 14 36.47768660760897 38.0 35.0 41.0 31.0 41.0 15 36.70108155599208 38.0 35.0 41.0 31.0 41.0 16 36.85402851917923 38.0 35.0 41.0 32.0 41.0 17 36.803976220950524 38.0 35.0 41.0 32.0 41.0 18 36.74798787153987 38.0 35.0 40.0 32.0 41.0 19 36.66991946508339 38.0 35.0 40.0 31.0 41.0 20 36.50611307493051 38.0 35.0 40.0 31.0 41.0 21 36.31885492701581 38.0 35.0 40.0 31.0 41.0 22 36.238128053192995 38.0 35.0 40.0 31.0 41.0 23 36.187700862842995 37.0 35.0 40.0 31.0 41.0 24 36.105578332542066 37.0 35.0 40.0 31.0 41.0 25 35.9829674531416 37.0 35.0 40.0 30.0 41.0 26 35.87254196769519 37.0 34.0 40.0 30.0 41.0 27 35.82250086956305 37.0 34.0 40.0 30.0 41.0 28 35.79815839301014 37.0 34.0 40.0 30.0 41.0 29 35.80061432529685 37.0 35.0 40.0 30.0 41.0 30 35.71418162449934 36.0 34.0 40.0 30.0 41.0 31 35.535010257421774 36.0 34.0 40.0 29.0 41.0 32 35.32995235603365 36.0 34.0 40.0 29.0 41.0 33 35.14844172434198 36.0 34.0 40.0 27.0 41.0 34 34.99277158211942 36.0 34.0 40.0 27.0 41.0 35 34.833314873914915 36.0 34.0 40.0 26.0 41.0 36 34.64865763731474 36.0 33.0 40.0 25.0 41.0 37 34.559821582461645 36.0 33.0 40.0 25.0 41.0 38 34.531505560536836 36.0 33.0 40.0 25.0 41.0 39 34.46705989376086 36.0 33.0 40.0 24.0 41.0 40 34.26892582984938 36.0 33.0 40.0 23.0 41.0 41 34.234438243600856 35.0 33.0 40.0 23.0 41.0 42 34.148859239052996 35.0 33.0 40.0 23.0 41.0 43 34.06024500833474 35.0 33.0 40.0 23.0 41.0 44 34.01643676394365 35.0 33.0 40.0 23.0 41.0 45 33.98305083163828 35.0 33.0 40.0 23.0 41.0 46 33.96021321250503 35.0 33.0 40.0 23.0 41.0 47 33.90891988135365 35.0 33.0 40.0 23.0 41.0 48 33.85519426256386 35.0 33.0 40.0 23.0 41.0 49 33.79008467895234 35.0 33.0 39.0 24.0 41.0 50 33.647457360299015 35.0 33.0 39.0 23.0 41.0 51 33.484227775119486 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 10.0 13 18.0 14 44.0 15 125.0 16 329.0 17 924.0 18 2032.0 19 3952.0 20 6644.0 21 10307.0 22 15211.0 23 22068.0 24 30522.0 25 41571.0 26 54094.0 27 62161.0 28 69400.0 29 78404.0 30 92719.0 31 111696.0 32 138970.0 33 178585.0 34 303971.0 35 472846.0 36 228853.0 37 272021.0 38 379919.0 39 636415.0 40 442.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.254020056884045 23.61661696105291 28.98043654243063 14.148926439632412 2 32.02076497904026 25.702666058542906 29.334484039551274 12.942084922865558 3 29.12049997231087 25.336765125885975 31.55611652829362 13.986618373509533 4 26.110722910233093 27.669838575497053 31.197340101510207 15.022098412759648 5 23.808978619637877 32.26190928046224 29.40958690932713 14.519525190572754 6 22.411735461185756 40.230217984990624 26.847222593830367 10.510823959993255 7 84.84872714013622 5.66485328806835 7.616967897412093 1.8694516743833256 8 86.2265567978675 4.438940495753608 7.111314648668526 2.223188057710364 9 80.89655528585446 6.520602888753796 9.145656633661641 3.4371851917300975 10 51.187521350184085 22.174044522872773 14.9089463260261 11.72948780091704 11 44.76109260675403 21.928855742133955 20.08199092916623 13.22806072194578 12 39.95046446178247 21.65544894031531 24.17702623747067 14.217060360431551 13 22.03976780955356 38.1376043864556 24.212586544079535 15.61004125991131 14 16.907354667858023 40.25650710055011 27.113940449086538 15.722197782505326 15 15.742513513227625 23.819992047931436 45.51451688072333 14.922977558117612 16 17.27095335844229 18.387696320581608 44.912418355962714 19.428931965013387 17 17.13561885822482 19.557764186944546 30.037850104129788 33.26876685070085 18 21.602559595402735 23.33319229508023 33.87089648684082 21.19335162267621 19 29.644975605567442 23.366574805133876 26.52036644227066 20.468083147028025 20 32.06148977462295 21.340975117741014 26.037735614253744 20.5597994933823 21 23.320218849886974 27.34914247705069 27.328702300810946 22.00193637225139 22 23.2728984418799 25.043633709552875 25.16107916663815 26.522388681929083 23 21.68338695898089 29.582286176156362 25.09820306895091 23.63612379591184 24 20.44655407251067 23.17085311757799 38.13184878127394 18.250744028637403 25 18.42854556168173 25.31601383585263 34.286233401301324 21.969207201164313 26 18.11388507083128 33.82849167677268 28.000272535683195 20.057350716712847 27 19.548430773136445 34.02972007847534 27.92884080867186 18.49300833971635 28 16.558409436952477 29.2113140886637 36.23925024064652 17.991026233737305 29 17.285264592948046 24.7734624911877 35.727623607065766 22.213649308798487 30 19.48810580855675 30.669255548247836 30.009289857876997 19.833348785318417 31 28.22187889086688 27.127473899108285 24.85173872165831 19.79890848836652 32 29.52429456502869 26.41079216416355 26.561869022337348 17.50304424847041 33 28.25230581988129 27.86876473512705 25.23142199537187 18.647507449619788 34 20.552363873715176 28.380764705260127 27.51216610489886 23.554705316125837 35 22.022874330560896 25.373600999048612 30.51183196868453 22.091692701705963 36 29.529801279175473 26.896907466668825 25.15566578662945 18.417625467526253 37 21.849583947523815 33.54410255803983 27.52759734906159 17.078716145374763 38 21.17984928403383 32.87421233765305 24.243666812060514 21.702271566252616 39 22.187702418411963 31.99083583209562 26.47519271943945 19.34626903005297 40 24.83132965679793 26.583740322027666 26.306693488823857 22.278236532350544 41 18.309015642179315 25.251177721265684 28.243096851590632 28.19670978496437 42 22.30433897963387 26.512806377086097 24.689243987259267 26.493610656020767 43 23.125990508540383 26.65881208042416 26.239088461473848 23.97610894956161 44 20.731005414002237 30.494814044174422 27.611691407472577 21.16248913435076 45 18.576946841230544 36.22739680511023 23.05281654428487 22.142839809374358 46 21.02351460274813 33.57608505602226 25.265146730598474 20.135253610631132 47 22.647653050875192 27.39876512713043 26.943045642260206 23.010536179734174 48 23.276974032576103 24.100958914934644 30.937840086265634 21.68422696622362 49 21.466011751390212 26.14734100374021 30.894097486885 21.49254975798458 50 19.66519177987579 33.16995710985242 26.630905173137936 20.533945937133858 51 19.961372111386204 32.66414830421204 24.51894029664078 22.85553928776097 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2426.0 1 4377.5 2 6329.0 3 16672.0 4 27015.0 5 20322.5 6 13630.0 7 13824.5 8 14019.0 9 14850.0 10 15681.0 11 16060.5 12 16440.0 13 16501.0 14 16562.0 15 16401.5 16 16241.0 17 15561.5 18 14882.0 19 15224.0 20 15566.0 21 15437.5 22 15309.0 23 15869.5 24 16430.0 25 17528.0 26 23629.0 27 28632.0 28 35369.5 29 42107.0 30 48276.5 31 54446.0 32 58481.5 33 62517.0 34 72600.0 35 82683.0 36 87632.0 37 92581.0 38 111962.0 39 131343.0 40 169386.5 41 207430.0 42 256151.0 43 304872.0 44 311573.0 45 318274.0 46 297916.5 47 277559.0 48 259309.0 49 241059.0 50 222251.0 51 203443.0 52 186129.5 53 168816.0 54 155640.0 55 142464.0 56 138164.0 57 133864.0 58 130840.0 59 127816.0 60 118334.5 61 108853.0 62 94631.5 63 80410.0 64 69653.5 65 58897.0 66 48303.0 67 37709.0 68 36960.5 69 36212.0 70 30114.0 71 24016.0 72 20301.0 73 16586.0 74 13219.0 75 8134.0 76 6416.0 77 4624.0 78 2832.0 79 2247.0 80 1662.0 81 1184.0 82 706.0 83 587.5 84 469.0 85 432.0 86 395.0 87 258.5 88 122.0 89 79.0 90 36.0 91 26.0 92 16.0 93 11.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3214258.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.170099047604847 #Duplication Level Percentage of deduplicated Percentage of total 1 81.04604512843692 12.294765320150402 2 7.309608714335862 2.217749763914211 3 2.545461039370606 1.1584468826721381 4 1.3001412448519856 0.7889308584112353 5 0.8032993259737778 0.6093065169948211 6 0.5558721099022527 0.5059580979010956 7 0.38113641347575256 0.4047314000153229 8 0.2931045082852593 0.3557139537589519 9 0.2251603736126991 0.3074134652370322 >10 2.418117729405585 8.892441084361312 >50 1.187832957060391 13.183680347116034 >100 1.9089770998547535 55.54188300771901 >500 0.021932751442835782 2.1398419798753525 >1k 0.0028967784924500096 0.8298275306865676 >5k 0.0 0.0 >10k+ 4.1382549892142993E-4 0.7693097911864842 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14456 0.4497461000330403 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 10053 0.3127626967094739 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3557 0.11066317638472083 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3532 0.10988539190071239 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3267 0.10164087637022291 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.11113793603376E-5 0.0 0.0 0.02908913970191565 0.0 2 3.11113793603376E-5 0.0 0.0 0.07242729115086592 0.0 3 3.11113793603376E-5 0.0 0.0 0.10829871155333518 0.0 4 3.11113793603376E-5 0.0 0.0 0.1779882013204914 0.0 5 6.22227587206752E-5 0.0 0.0 0.27981574596687636 0.0 6 6.22227587206752E-5 0.0 0.0 0.46701291557802765 0.0 7 6.22227587206752E-5 0.0 0.0 0.5818139054176734 0.0 8 6.22227587206752E-5 0.0 0.0 0.8783986848597717 0.0 9 6.22227587206752E-5 0.0 0.0 1.0053020012705887 0.0 10 6.22227587206752E-5 0.0 0.0 1.1844413236274125 0.0 11 6.22227587206752E-5 0.0 0.0 1.3662873359885859 0.0 12 6.22227587206752E-5 0.0 0.0 1.5337598910852832 0.0 13 1.244455174413504E-4 0.0 0.0 1.6126583491430992 0.0 14 1.244455174413504E-4 0.0 0.0 1.6456675226444175 0.0 15 1.244455174413504E-4 0.0 0.0 1.6856456451224513 0.0 16 1.244455174413504E-4 0.0 0.0 1.759068500412848 0.0 17 1.244455174413504E-4 0.0 0.0 1.834918043293351 0.0 18 1.244455174413504E-4 0.0 0.0 1.9473545683016111 0.0 19 1.244455174413504E-4 0.0 0.0 2.002235041493247 0.0 20 1.5555689680168798E-4 0.0 0.0 2.0603510981383573 0.0 21 1.5555689680168798E-4 0.0 0.0 2.135982861363338 0.0 22 1.5555689680168798E-4 0.0 0.0 2.213045748038894 0.0 23 1.5555689680168798E-4 0.0 0.0 2.3028331888728286 0.0 24 1.5555689680168798E-4 0.0 0.0 2.3742338045048035 0.0 25 1.5555689680168798E-4 0.0 0.0 2.432069858735671 0.0 26 1.5555689680168798E-4 0.0 0.0 2.4960037433211646 0.0 27 1.5555689680168798E-4 0.0 0.0 2.5587553954909654 0.0 28 1.5555689680168798E-4 0.0 0.0 2.620169258348272 0.0 29 1.5555689680168798E-4 0.0 0.0 2.687960953974448 0.0 30 1.5555689680168798E-4 0.0 0.0 2.777872840325823 0.0 31 1.5555689680168798E-4 0.0 0.0 2.8612824483908885 0.0 32 1.5555689680168798E-4 0.0 0.0 2.9404609088629474 0.0 33 1.8666827616202556E-4 0.0 0.0 3.0165593427783333 0.0 34 1.8666827616202556E-4 0.0 0.0 3.098724495668985 0.0 35 1.8666827616202556E-4 0.0 0.0 3.20425429445925 0.0 36 1.8666827616202556E-4 0.0 0.0 3.2989262218527573 0.0 37 1.8666827616202556E-4 0.0 0.0 3.3892736675151776 0.0 38 1.8666827616202556E-4 0.0 0.0 3.478781105934869 0.0 39 1.8666827616202556E-4 0.0 0.0 3.5711819026350717 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGT 50 2.1827873E-11 45.0 20 CACTACG 25 3.892376E-5 45.0 1 CGGTCTA 135 0.0 45.0 31 CAATCGT 35 1.2128476E-7 45.0 18 TATGTCG 30 2.1667256E-6 44.999996 1 CATACGA 1215 0.0 42.03704 18 ACATACG 1220 0.0 41.86475 17 TTACCGG 165 0.0 40.909092 2 TACGATA 45 1.9301297E-8 40.000004 33 TGTAACG 85 0.0 39.705883 1 AATACGG 165 0.0 39.545456 2 ATCGTAC 40 3.4608092E-7 39.375 29 TACGAAC 40 3.4608092E-7 39.375 16 TATAGCG 80 0.0 39.375 1 TACCGTA 40 3.4608092E-7 39.375 45 CGTTTTT 11650 0.0 39.263947 1 GCGATAT 265 0.0 39.056602 9 TACGGGA 785 0.0 38.980892 4 ACTTACG 145 0.0 38.793106 1 GACCGAT 2005 0.0 38.715714 9 >>END_MODULE