##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545387_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 7265536 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.188833969028575 31.0 31.0 33.0 30.0 34.0 2 31.558029854920544 31.0 31.0 34.0 30.0 34.0 3 31.709064410388994 31.0 31.0 34.0 30.0 34.0 4 35.501555700776926 37.0 35.0 37.0 33.0 37.0 5 35.412182253312075 37.0 35.0 37.0 33.0 37.0 6 35.468155549707554 37.0 35.0 37.0 33.0 37.0 7 35.8776135717998 37.0 35.0 37.0 35.0 37.0 8 35.9352947944928 37.0 35.0 37.0 35.0 37.0 9 37.81567127325499 39.0 37.0 39.0 35.0 39.0 10 37.090905061925234 39.0 37.0 39.0 33.0 39.0 11 36.7801524897819 39.0 37.0 39.0 32.0 39.0 12 36.28793622383813 38.0 35.0 39.0 32.0 39.0 13 36.079640786309504 38.0 35.0 39.0 31.0 39.0 14 37.11129048152814 39.0 35.0 41.0 31.0 41.0 15 37.28219652342236 39.0 35.0 41.0 32.0 41.0 16 37.32308270167542 39.0 35.0 41.0 32.0 41.0 17 37.24237165709454 39.0 35.0 41.0 32.0 41.0 18 37.16658853524365 39.0 35.0 41.0 32.0 41.0 19 37.14504862407949 39.0 35.0 41.0 32.0 41.0 20 37.03230085158204 39.0 35.0 41.0 32.0 41.0 21 36.92302618829498 39.0 35.0 41.0 31.0 41.0 22 36.8168345735263 38.0 35.0 41.0 31.0 41.0 23 36.72793844803742 38.0 35.0 41.0 31.0 41.0 24 36.64580686132448 38.0 35.0 41.0 31.0 41.0 25 36.53392192950389 38.0 35.0 40.0 31.0 41.0 26 36.39859289115077 38.0 35.0 40.0 30.0 41.0 27 36.27779437057362 38.0 35.0 40.0 30.0 41.0 28 36.20301888257109 38.0 35.0 40.0 30.0 41.0 29 36.31806256276206 38.0 35.0 40.0 30.0 41.0 30 36.2934427687097 38.0 35.0 40.0 30.0 41.0 31 36.190062371172615 38.0 35.0 40.0 30.0 41.0 32 36.06477595045981 38.0 35.0 40.0 30.0 41.0 33 35.868937818214654 38.0 35.0 40.0 29.0 41.0 34 35.72185121648286 38.0 35.0 40.0 29.0 41.0 35 35.590275927336954 38.0 34.0 40.0 28.0 41.0 36 35.465016070390405 38.0 34.0 40.0 27.0 41.0 37 35.38034523536873 38.0 34.0 40.0 27.0 41.0 38 35.32111643242838 38.0 34.0 40.0 27.0 41.0 39 35.26764095587717 38.0 34.0 40.0 27.0 41.0 40 35.155350961030265 38.0 34.0 40.0 26.0 41.0 41 35.091699222190904 38.0 34.0 40.0 26.0 41.0 42 35.03547446465065 37.0 34.0 40.0 26.0 41.0 43 34.924073598974665 37.0 34.0 40.0 26.0 41.0 44 34.81130380470209 37.0 34.0 40.0 25.0 41.0 45 34.76272032786019 37.0 34.0 40.0 25.0 41.0 46 34.762828922738805 37.0 34.0 40.0 25.0 41.0 47 34.74418982990381 37.0 34.0 40.0 25.0 41.0 48 34.67823447574962 37.0 34.0 40.0 25.0 41.0 49 34.63774056036609 37.0 34.0 40.0 25.0 41.0 50 34.529426321746946 36.0 33.0 40.0 24.0 41.0 51 34.30547890754378 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 0.0 10 6.0 11 7.0 12 17.0 13 30.0 14 79.0 15 174.0 16 521.0 17 1317.0 18 3170.0 19 6068.0 20 10677.0 21 16885.0 22 25780.0 23 38363.0 24 55886.0 25 79566.0 26 106120.0 27 125000.0 28 140214.0 29 160453.0 30 190532.0 31 231348.0 32 284157.0 33 363052.0 34 574509.0 35 788443.0 36 552526.0 37 703137.0 38 1029562.0 39 1777134.0 40 801.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.32054235227793 24.39603905341602 28.506788762728586 13.776629831577464 2 31.31394572953737 25.905631738663192 29.271095759486983 13.509326772312463 3 29.444379602551003 25.878366028328813 30.75442747789014 13.922826891230047 4 25.628804261653926 28.122426205031537 30.863228810647968 15.38554072266657 5 23.428663762728586 32.480273994926186 29.740076988125857 14.350985254219372 6 22.059638820866073 41.29649897818963 26.303262415876823 10.340599785067475 7 89.61469601141609 3.208476291356894 5.643024822944928 1.5338028742820902 8 90.90352040097248 2.2158172500968956 5.339303253056622 1.5413590958740002 9 85.82022028381664 4.67804440030302 6.96379455005109 2.537940765829252 10 41.27128404566435 32.55945604013248 13.686602062119025 12.48265785208414 11 33.79044574275043 24.14913366336634 25.407967147915862 16.65245344596737 12 31.110203018744937 23.41970365297206 27.971866081181073 17.498227247101937 13 22.46033878298862 31.427481743948416 28.643227423276134 17.46895204978683 14 19.542907777210104 33.34864764278919 29.02099721204327 18.087447367957438 15 18.96658415841584 25.27546487967302 38.435801570593 17.322149391318135 16 20.866994534195413 22.617477912159544 37.255517005214756 19.260010548430287 17 20.837856972974876 22.86468610161728 29.116516661675064 27.18094026373278 18 23.308879069624044 24.25121835470914 31.582790313061555 20.857112262605266 19 27.067252849617702 25.64872020453825 26.813878563123218 20.470148382720836 20 29.155921875550543 24.594978264507947 26.587990204714423 19.661109655227087 21 24.860946253655612 26.748694108734718 28.210141688101192 20.180217949508474 22 24.3542114442761 24.336800478312956 27.201062660758957 24.107925416651984 23 22.034919378281245 28.61139219460202 27.27607433229978 22.077614094816955 24 21.47458907367605 25.33141395211585 33.65497053486487 19.539026439343225 25 20.822978511151828 26.994773682216977 31.332210039286846 20.85003776734435 26 21.07989004527677 30.04010991067968 27.484854524153484 21.395145519890068 27 20.857993133610513 29.23045182076037 28.83862938673761 21.07292565889151 28 19.13668860769529 27.60524481607413 33.25022407156196 20.007842504668616 29 19.824882844156303 25.488924698742117 32.63397222173285 22.052220235368733 30 21.72571989182904 27.488102735985343 29.939608034424438 20.846569337761178 31 25.245611610760722 26.781189990662767 26.485162278460944 21.48803612011557 32 25.961869846904616 26.711931507874986 27.35381119851309 19.972387446707305 33 24.281126678059266 27.032637371833268 27.46204822328318 21.224187726824283 34 20.638559908037067 27.561614174095343 29.141869230294915 22.65795668757267 35 21.30010779658927 26.981312872168 29.933070319932348 21.785509011310385 36 25.756282812444947 27.534995353405446 26.393414057820376 20.315307776329234 37 21.886919285789787 30.403221455375075 27.77662928103308 19.93322997780205 38 21.209144101687748 29.789598454952255 27.01580447746732 21.985452965892673 39 21.512163727493746 29.93909878087453 27.168663124097108 21.38007436753462 40 23.433536080476376 27.00782158398224 27.08251669250555 22.476125643035832 41 19.66360086853881 26.676971939854127 27.99852619269934 25.66090099890772 42 22.26116559053592 27.551938356647053 26.151559912441424 24.035336140375605 43 21.896856611817768 27.296774800923153 27.398708092561925 23.407660494697158 44 21.635967394559742 28.73578769687467 27.874873925337372 21.753370983228216 45 20.340385072759943 30.13586334167225 26.21828589108911 23.3054656944787 46 22.058606550156796 29.575271528487367 27.1364425143582 21.22967940699764 47 21.84050839470068 27.076075323279657 28.54249156566013 22.540924716359537 48 22.70553748546563 25.45751614196117 29.28754327278813 22.549403099785067 49 20.874674628272434 25.967265181811776 30.03838945949755 23.11967073041824 50 20.302989345865193 29.336968394348332 28.484092570733942 21.875949689052536 51 20.222265776399702 29.643332577252384 27.088242354039675 23.046159292308236 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1437.0 1 4334.0 2 7231.0 3 28084.0 4 48937.0 5 36757.0 6 24577.0 7 24478.5 8 24380.0 9 24744.0 10 25108.0 11 25427.0 12 25746.0 13 25336.0 14 24926.0 15 24583.5 16 24241.0 17 23646.5 18 23052.0 19 23282.0 20 23512.0 21 27514.0 22 31516.0 23 33146.0 24 34776.0 25 41388.5 26 58340.5 27 68680.0 28 84338.5 29 99997.0 30 119112.0 31 138227.0 32 162315.5 33 186404.0 34 208573.5 35 230743.0 36 246117.5 37 261492.0 38 297704.0 39 333916.0 40 397016.0 41 460116.0 42 518438.0 43 576760.0 44 598357.0 45 619954.0 46 610931.5 47 601909.0 48 574439.0 49 546969.0 50 520309.5 51 493650.0 52 468914.0 53 444178.0 54 416420.0 55 388662.0 56 358715.0 57 328768.0 58 310349.0 59 291930.0 60 268845.0 61 245760.0 62 214887.0 63 184014.0 64 157003.0 65 129992.0 66 111760.5 67 93529.0 68 78144.5 69 62760.0 70 52445.5 71 42131.0 72 35120.5 73 28110.0 74 22875.0 75 14703.5 76 11767.0 77 8843.0 78 5919.0 79 4057.5 80 2196.0 81 1626.0 82 1056.0 83 772.5 84 489.0 85 327.5 86 166.0 87 131.5 88 97.0 89 70.0 90 43.0 91 41.0 92 39.0 93 29.5 94 20.0 95 14.5 96 9.0 97 4.5 98 0.0 99 2.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 7265536.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.506400510237423 #Duplication Level Percentage of deduplicated Percentage of total 1 78.90423698797454 13.024249376781974 2 8.781564523933389 2.8990404227707387 3 2.73318409529025 1.3534509403521537 4 1.3888053693216695 0.9169671062716671 5 0.7423898947128815 0.6127092468441907 6 0.5009842027533654 0.4961667539969424 7 0.3833964385271966 0.442994661796997 8 0.2819856071001557 0.3723653895134096 9 0.22821543276693068 0.3390313802281308 >10 2.729512240702264 10.986988728118765 >50 1.428598509352546 17.29103495696929 >100 1.8889968227536622 49.75929154780812 >500 0.006774895689034947 0.745481013779055 >1k 0.0011856067317522819 0.330692746669099 >5k 8.4686195125163E-5 0.09547412857716304 >10k+ 8.4686195125163E-5 0.33406159952226094 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23898 0.32892273880412953 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0349045135830309 0.0 2 0.0 0.0 0.0 0.1161235729889715 0.0 3 0.0 0.0 0.0 0.18604270903068953 0.0 4 0.0 0.0 0.0 0.3037903879355907 0.0 5 0.0 0.0 0.0 0.5549349696980375 0.0 6 0.0 0.0 0.0 0.9137109774144674 0.0 7 0.0 0.0 0.0 1.1085899237165708 0.0 8 0.0 0.0 0.0 1.5448963435044571 0.0 9 0.0 0.0 0.0 1.7546675152390685 0.0 10 0.0 0.0 0.0 2.0396155218279834 0.0 11 0.0 0.0 0.0 2.3393594085832072 0.0 12 0.0 0.0 0.0 2.5757218737888024 0.0 13 0.0 0.0 0.0 2.687055710686727 0.0 14 0.0 0.0 0.0 2.7375956846129452 0.0 15 0.0 0.0 0.0 2.80511995260914 0.0 16 0.0 0.0 0.0 2.9442700442197243 0.0 17 0.0 0.0 0.0 3.119673483140129 0.0 18 1.3763609457031112E-5 0.0 0.0 3.3214755249991192 0.0 19 1.3763609457031112E-5 0.0 0.0 3.4405445104118955 0.0 20 1.3763609457031112E-5 0.0 0.0 3.5652841029209683 0.0 21 1.3763609457031112E-5 0.0 0.0 3.735539951904443 0.0 22 1.3763609457031112E-5 0.0 0.0 3.926702723653148 0.0 23 1.3763609457031112E-5 0.0 0.0 4.139267908107537 0.0 24 2.7527218914062224E-5 0.0 0.0 4.303385187273176 0.0 25 2.7527218914062224E-5 0.0 0.0 4.442039788943307 0.0 26 2.7527218914062224E-5 0.0 0.0 4.574115385292978 0.0 27 2.7527218914062224E-5 0.0 0.0 4.710044792290617 0.0 28 2.7527218914062224E-5 0.0 0.0 4.855195817624467 0.0 29 2.7527218914062224E-5 0.0 0.0 5.016973283182411 0.0 30 2.7527218914062224E-5 0.0 0.0 5.216394220605334 0.0 31 2.7527218914062224E-5 0.0 0.0 5.3951559802332545 0.0 32 2.7527218914062224E-5 0.0 0.0 5.568398532468906 0.0 33 2.7527218914062224E-5 0.0 0.0 5.740994195060075 0.0 34 2.7527218914062224E-5 0.0 0.0 5.919673373031253 0.0 35 2.7527218914062224E-5 0.0 0.0 6.130077670800888 0.0 36 2.7527218914062224E-5 0.0 0.0 6.318446429829816 0.0 37 4.129082837109334E-5 0.0 0.0 6.509760601282548 0.0 38 4.129082837109334E-5 0.0 0.0 6.696615363271203 0.0 39 5.505443782812445E-5 0.0 0.0 6.894205740636341 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 22535 0.0 41.096073 1 CGTTAGG 1180 0.0 39.851696 2 TACGCTA 35 6.2528798E-6 38.57143 20 TACGGGA 2370 0.0 37.87975 4 AGGGCGA 7935 0.0 37.854443 6 GGGCGAT 16070 0.0 37.607346 7 CGTAAGG 1330 0.0 37.387215 2 TCGAACG 115 0.0 37.173912 1 TAGGGAT 11335 0.0 37.15924 5 AATACGG 370 0.0 37.094593 2 TAAGGGA 9370 0.0 37.003735 4 ACGTAGG 1000 0.0 36.899998 2 TAGGGCG 3095 0.0 36.785137 5 CGAGGGA 4560 0.0 36.661186 4 AACGGGA 2805 0.0 36.417114 4 ACGGGAT 3090 0.0 36.407764 5 GCGAGAC 2785 0.0 36.355476 21 CACGACC 2775 0.0 36.162163 27 ACACGAC 2760 0.0 36.11413 26 GCGTTAG 455 0.0 36.0989 1 >>END_MODULE