##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545386_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1360443 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.322752956206177 31.0 31.0 33.0 30.0 34.0 2 31.702769612545325 31.0 31.0 34.0 30.0 34.0 3 31.875392794846974 31.0 31.0 34.0 30.0 34.0 4 35.63498139944121 37.0 35.0 37.0 33.0 37.0 5 35.55324552370074 37.0 35.0 37.0 33.0 37.0 6 35.620719868454614 37.0 35.0 37.0 33.0 37.0 7 35.968327228704176 37.0 35.0 37.0 35.0 37.0 8 36.02806218268608 37.0 35.0 37.0 35.0 37.0 9 37.9765826278646 39.0 38.0 39.0 35.0 39.0 10 37.2820353370189 39.0 37.0 39.0 34.0 39.0 11 36.91157365652218 39.0 37.0 39.0 33.0 39.0 12 35.92195409877518 37.0 35.0 39.0 32.0 39.0 13 35.46676928030061 37.0 35.0 39.0 31.0 39.0 14 36.392448636216294 38.0 35.0 41.0 31.0 41.0 15 36.751831572509836 38.0 35.0 41.0 32.0 41.0 16 36.92316914416848 38.0 35.0 41.0 32.0 41.0 17 36.90135933662785 38.0 35.0 41.0 32.0 41.0 18 36.860411645324355 38.0 35.0 40.0 32.0 41.0 19 36.830131067600774 38.0 35.0 40.0 32.0 41.0 20 36.692547942104156 38.0 35.0 40.0 32.0 41.0 21 36.564333088560126 38.0 35.0 40.0 32.0 41.0 22 36.45608526046295 38.0 35.0 40.0 31.0 41.0 23 36.39152393742332 37.0 35.0 40.0 31.0 41.0 24 36.31047019242997 37.0 35.0 40.0 31.0 41.0 25 36.22754426315546 37.0 35.0 40.0 31.0 41.0 26 36.090109618705085 37.0 35.0 40.0 31.0 41.0 27 35.97792630782767 37.0 35.0 40.0 31.0 41.0 28 35.968341929797866 37.0 35.0 40.0 31.0 41.0 29 36.116392969054935 37.0 35.0 40.0 31.0 41.0 30 36.130288442808705 37.0 35.0 40.0 31.0 41.0 31 35.99289643153002 37.0 35.0 40.0 31.0 41.0 32 35.86451986595543 37.0 35.0 40.0 30.0 41.0 33 35.71318019204039 37.0 34.0 40.0 30.0 41.0 34 35.60926698141708 37.0 34.0 40.0 30.0 41.0 35 35.50704586667725 36.0 34.0 40.0 30.0 41.0 36 35.32555792488182 36.0 34.0 40.0 29.0 41.0 37 35.210813683483984 36.0 34.0 40.0 28.0 41.0 38 35.20402471841893 36.0 34.0 40.0 29.0 41.0 39 35.190823871341905 36.0 34.0 40.0 29.0 41.0 40 35.05996502609812 36.0 34.0 40.0 28.0 41.0 41 35.06280380728924 36.0 34.0 40.0 28.0 41.0 42 35.036294795151285 36.0 34.0 40.0 28.0 41.0 43 34.91912781351369 36.0 34.0 40.0 28.0 41.0 44 34.809474560859954 35.0 34.0 40.0 27.0 41.0 45 34.786478375058714 35.0 34.0 40.0 27.0 41.0 46 34.82627864599987 35.0 34.0 40.0 27.0 41.0 47 34.81810189769068 35.0 34.0 40.0 28.0 41.0 48 34.80581472358636 35.0 34.0 40.0 28.0 41.0 49 34.81677365387598 36.0 34.0 40.0 28.0 41.0 50 34.68637274770057 35.0 34.0 40.0 27.0 41.0 51 34.45473202478898 35.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 3.0 14 7.0 15 12.0 16 70.0 17 203.0 18 430.0 19 828.0 20 1524.0 21 2409.0 22 3827.0 23 5826.0 24 8738.0 25 12737.0 26 17246.0 27 20548.0 28 23289.0 29 27042.0 30 33802.0 31 42641.0 32 55339.0 33 75111.0 34 140773.0 35 223859.0 36 92194.0 37 112463.0 38 165135.0 39 294243.0 40 141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.557073688497056 24.764359844550636 30.79945282529294 12.879113641659371 2 29.082659104424074 25.91053061392502 31.117363976293017 13.889446305357886 3 28.405600234629457 25.249863463592376 32.2315598668963 14.112976434881874 4 25.13857618437524 27.740081723379813 31.907253740142 15.214088352102955 5 22.182259749214044 32.719121639054336 31.02783431573392 14.0707842959977 6 20.606229000406483 41.35167735803705 27.381889575674982 10.660204065881482 7 90.31139121594951 3.4022006067141364 4.913473037826649 1.3729351395097038 8 92.30765272782469 2.133275705046077 4.108735169352924 1.4503363977763126 9 88.8524546783658 3.431676299558305 5.680796622864758 2.0350723992111392 10 53.97197824532156 18.984845377571865 14.957848289123469 12.085328087983104 11 48.0736054358764 21.71572054102965 16.548139098808257 13.662534924285694 12 41.13226353474567 21.572825910383603 22.93348563666394 14.361424918206788 13 21.16736974647229 42.072251465147744 23.033673590146737 13.72670519823322 14 16.798939757123232 43.12734895912582 25.828204489272977 14.245506794477974 15 14.196699163434264 24.260406352930627 46.80637115998245 14.736523323652664 16 15.059726868380373 18.399594837857965 46.86355841442824 19.677119879333425 17 16.392454516653768 19.583106385199528 27.85107498072319 36.17336411742352 18 21.712265784013002 23.642445879761226 32.842022782284886 21.803265553940886 19 28.963065707273294 25.373793683381074 23.922795736388807 21.740344872956825 20 30.848701489147285 24.010928793047558 23.85002532263388 21.290344395171278 21 22.42321067475815 28.291225725737867 26.94056274316528 22.345000856338707 22 23.474926917188004 25.67082928134439 24.37529540010129 26.47894840136632 23 20.07346136515826 31.74620325879144 23.64817930629949 24.532156069750812 24 20.36498405298862 25.61614121282553 36.5965350992287 17.422339634957144 25 17.19719238512749 26.93990119394932 34.529561326714905 21.333345094208283 26 17.71408283919282 34.58520496632347 26.89351924336411 20.8071929511196 27 18.680238716359305 33.10289368977605 27.71207613990443 20.504791453960216 28 15.952891815386606 28.695873329496347 37.3088765938742 18.042358261242843 29 15.878651292262887 25.626431978407034 36.55228480722823 21.942631922101842 30 18.774546232366955 29.4408512521289 31.60117696956065 20.18342554594349 31 27.31073628222572 27.31294144627889 24.554942764967 20.821379506528388 32 28.64427249065194 27.42474326377511 25.183708541996978 18.747275703575966 33 26.42646549690064 27.621664413724055 24.819047913069493 21.132822176305808 34 18.891199410780164 27.09124895346589 29.454670280195494 24.562881355558446 35 20.351606057732667 25.254347297167172 30.947713355135054 23.446333289965107 36 29.353453250154544 24.555604314182954 25.658847889988778 20.432094545673728 37 21.083647017919898 30.501829183582114 28.72490798952988 19.689615808968107 38 20.965303213732586 32.46214652139046 23.576952507381787 22.99559775749517 39 20.642173174473317 32.291613834611226 26.046515730537774 21.019697260377686 40 22.710911078229664 26.281806735012054 24.50929586906618 26.497986317692106 41 17.20197024057605 23.99247892046929 26.87837711686561 31.92717372208905 42 21.12392801462465 27.78624315755971 23.662733389050477 27.427095438765164 43 21.9825453914644 28.735051744174505 25.130196560973157 24.152206303387942 44 20.586676545801623 31.796922032014574 26.47240641467522 21.143995007508583 45 17.67321379874056 35.32878628505568 22.886001104052138 24.11199881215163 46 21.540851031612497 32.00854427565139 26.050632036770377 20.39997265596574 47 21.306956631038567 27.112712550250173 28.412142221320558 23.168188597390703 48 23.75821699255316 23.233020420554187 29.609178774854954 23.399583812037697 49 20.3716730506166 23.381574972270062 31.15940910424031 25.087342872873027 50 18.66406751330265 32.44663686754976 26.473214974828053 22.416080644319532 51 17.69247223147166 33.54054524886379 23.42112091429042 25.345861605374132 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 234.0 1 599.0 2 964.0 3 2835.5 4 4707.0 5 3767.0 6 2827.0 7 3010.0 8 3193.0 9 3575.0 10 3957.0 11 4064.5 12 4172.0 13 3968.5 14 3765.0 15 3765.0 16 3765.0 17 3759.5 18 3754.0 19 3517.5 20 3281.0 21 3457.5 22 3634.0 23 3819.5 24 4005.0 25 4967.0 26 7361.0 27 8793.0 28 10704.5 29 12616.0 30 14984.5 31 17353.0 32 21032.0 33 24711.0 34 30467.5 35 36224.0 36 39277.0 37 42330.0 38 52289.0 39 62248.0 40 81315.5 41 100383.0 42 120569.0 43 140755.0 44 146810.5 45 152866.0 46 143290.0 47 133714.0 48 123962.0 49 114210.0 50 106458.0 51 98706.0 52 92853.5 53 87001.0 54 77683.0 55 68365.0 56 61246.5 57 54128.0 58 47527.5 59 40927.0 60 38225.0 61 35523.0 62 31860.5 63 28198.0 64 24079.5 65 19961.0 66 16668.5 67 13376.0 68 10458.5 69 7541.0 70 6191.0 71 4841.0 72 4279.5 73 3718.0 74 2732.5 75 1361.5 76 976.0 77 757.0 78 538.0 79 430.5 80 323.0 81 214.0 82 105.0 83 72.0 84 39.0 85 27.5 86 16.0 87 17.0 88 18.0 89 11.5 90 5.0 91 2.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1360443.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.07509052988902 #Duplication Level Percentage of deduplicated Percentage of total 1 77.76395543689956 15.611184453580144 2 7.216516960102112 2.897444625690588 3 2.393324431100345 1.4413861386520368 4 1.277505927880797 1.0258418861870748 5 0.7989318348208272 0.8019314455619222 6 0.6038959789146983 0.727395986840911 7 0.50449682981475 0.7089473671401182 8 0.39415421127462075 0.633014517926001 9 0.3670778353541849 0.6632208698625861 >10 5.736107988877172 29.046766123272366 >50 2.5834107289380497 36.52250667472123 >100 0.35840716763384634 9.33319588983496 >500 0.0011073341945432862 0.12130079529720722 >1k 0.0011073341945432862 0.4658632254328295 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2715 0.19956734681276617 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2461 0.1808969578291777 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04726401620648568 0.0 2 0.0 0.0 0.0 0.1790593211181946 0.0 3 0.0 0.0 0.0 0.2678539269928986 0.0 4 0.0 0.0 0.0 0.4343438130079687 0.0 5 0.0 0.0 0.0 0.7104303524660717 0.0 6 0.0 0.0 0.0 1.05994885489506 0.0 7 0.0 0.0 0.0 1.2385671432026186 0.0 8 0.0 0.0 0.0 1.715176600563199 0.0 9 0.0 0.0 0.0 1.8897520881065948 0.0 10 0.0 0.0 0.0 2.180392710315684 0.0 11 0.0 0.0 0.0 2.5546090501402854 0.0 12 0.0 0.0 0.0 2.8424564645486803 0.0 13 0.0 0.0 0.0 2.970355979633105 0.0 14 0.0 0.0 0.0 3.012548118517277 0.0 15 0.0 0.0 0.0 3.0839219283718613 0.0 16 0.0 0.0 0.0 3.259379481536529 0.0 17 0.0 0.0 0.0 3.472324823605252 0.0 18 0.0 0.0 0.0 3.7397377177875146 0.0 19 0.0 0.0 0.0 3.8832938976495157 0.0 20 0.0 0.0 0.0 4.021557683783885 0.0 21 0.0 0.0 0.0 4.23545859694232 0.0 22 0.0 0.0 0.0 4.453255299928038 0.0 23 0.0 0.0 0.0 4.716992920688335 0.0 24 0.0 0.0 0.0 4.906710534730231 0.0 25 0.0 0.0 0.0 5.059969436426223 0.0 26 0.0 0.0 0.0 5.219696819344875 0.0 27 0.0 0.0 0.0 5.364723108575663 0.0 28 0.0 0.0 0.0 5.530918972716975 0.0 29 0.0 0.0 0.0 5.7161527531840735 0.0 30 0.0 0.0 0.0 5.926966436668056 0.0 31 0.0 0.0 0.0 6.125945739733307 0.0 32 0.0 0.0 0.0 6.30956239989474 0.0 33 0.0 0.0 0.0 6.49457566395652 0.0 34 0.0 0.0 0.0 6.6966421966962235 0.0 35 0.0 0.0 0.0 6.942223966752007 0.0 36 0.0 0.0 0.0 7.158550560368939 0.0 37 0.0 0.0 0.0 7.365394948557198 0.0 38 0.0 0.0 0.0 7.566579415675629 0.0 39 0.0 0.0 0.0 7.772982771053252 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTACG 30 2.165796E-6 45.000004 1 ACGACCG 30 2.165796E-6 45.000004 19 CTTAACG 25 3.891185E-5 45.0 1 TACCCGC 20 7.033744E-4 45.0 42 ACTTCGC 20 7.033744E-4 45.0 32 TAGTTCG 20 7.033744E-4 45.0 1 GTTACGC 25 3.891185E-5 45.0 30 ACGTCGC 25 3.891185E-5 45.0 20 TATAGCG 80 0.0 42.1875 1 CGTTTTT 2730 0.0 41.373623 1 AAATGCG 60 3.6379788E-12 41.250004 1 ACGGGAT 245 0.0 40.408165 5 TATTGCG 90 0.0 40.000004 1 AGGGCGA 1605 0.0 39.53271 6 ATGACGG 160 0.0 39.375 2 TCGTTAG 75 0.0 39.000004 1 TGGGCGA 695 0.0 38.848923 6 GGGCGAT 2945 0.0 38.658745 7 CAACGCG 35 6.2491363E-6 38.571426 1 CCCGTTG 35 6.2491363E-6 38.571426 1 >>END_MODULE