##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545385_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3854120 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20875504654759 31.0 31.0 33.0 30.0 34.0 2 31.556366174379626 31.0 31.0 34.0 30.0 34.0 3 31.707797889012276 31.0 31.0 34.0 30.0 34.0 4 35.48010025634905 37.0 35.0 37.0 33.0 37.0 5 35.37972481396532 37.0 35.0 37.0 33.0 37.0 6 35.43795911907257 37.0 35.0 37.0 33.0 37.0 7 35.905280063931585 37.0 35.0 37.0 35.0 37.0 8 35.980632933069025 37.0 35.0 37.0 35.0 37.0 9 37.87729494670638 39.0 38.0 39.0 35.0 39.0 10 37.152158209915626 39.0 37.0 39.0 33.0 39.0 11 36.74513896816913 39.0 35.0 39.0 32.0 39.0 12 35.6429784230901 37.0 35.0 39.0 31.0 39.0 13 35.11765565161438 37.0 35.0 39.0 30.0 39.0 14 35.99244548690752 38.0 35.0 40.0 30.0 41.0 15 36.39654214191567 38.0 35.0 40.0 31.0 41.0 16 36.60091849760776 38.0 35.0 40.0 32.0 41.0 17 36.55326637468475 38.0 35.0 40.0 32.0 41.0 18 36.520205390595 37.0 35.0 40.0 31.0 41.0 19 36.46852355401492 37.0 35.0 40.0 31.0 41.0 20 36.3134292653057 37.0 35.0 40.0 31.0 41.0 21 36.176486461241474 37.0 35.0 40.0 31.0 41.0 22 36.05426945710045 37.0 35.0 40.0 31.0 41.0 23 36.03982880657582 36.0 34.0 40.0 31.0 41.0 24 35.962403350181106 36.0 34.0 40.0 31.0 41.0 25 35.872844644172986 36.0 34.0 40.0 31.0 41.0 26 35.718773675962346 36.0 34.0 40.0 30.0 41.0 27 35.59136923603832 36.0 34.0 40.0 30.0 41.0 28 35.59982434381908 36.0 34.0 40.0 30.0 41.0 29 35.751875395680464 36.0 34.0 40.0 30.0 41.0 30 35.74118994738098 36.0 35.0 40.0 30.0 41.0 31 35.600899816300476 36.0 34.0 40.0 30.0 41.0 32 35.428535437402054 36.0 34.0 40.0 30.0 41.0 33 35.25539370855085 36.0 34.0 40.0 29.0 41.0 34 35.163433676169916 36.0 34.0 40.0 29.0 41.0 35 35.01785128641558 36.0 34.0 40.0 28.0 41.0 36 34.8438598175459 36.0 34.0 40.0 27.0 41.0 37 34.685209593889134 35.0 33.0 40.0 26.0 41.0 38 34.69244678422052 35.0 33.0 40.0 27.0 41.0 39 34.689697518499685 35.0 34.0 40.0 27.0 41.0 40 34.53517923676481 35.0 33.0 40.0 25.0 41.0 41 34.531235664691295 35.0 34.0 40.0 26.0 41.0 42 34.49507721607007 35.0 33.0 40.0 26.0 41.0 43 34.365492252446735 35.0 33.0 40.0 26.0 41.0 44 34.24477130966343 35.0 33.0 40.0 25.0 41.0 45 34.22045966394404 35.0 33.0 40.0 25.0 41.0 46 34.25828983010389 35.0 33.0 40.0 26.0 41.0 47 34.24603100059157 35.0 33.0 40.0 26.0 41.0 48 34.21886682303613 35.0 33.0 40.0 26.0 41.0 49 34.217346891119114 35.0 33.0 39.0 26.0 41.0 50 34.06028120556703 35.0 33.0 39.0 24.0 41.0 51 33.82476726204685 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 4.0 13 8.0 14 26.0 15 83.0 16 269.0 17 674.0 18 1588.0 19 3168.0 20 5676.0 21 9321.0 22 14638.0 23 21506.0 24 31167.0 25 44184.0 26 57727.0 27 68444.0 28 77670.0 29 90122.0 30 109811.0 31 136457.0 32 171936.0 33 227847.0 34 413613.0 35 650421.0 36 253929.0 37 305119.0 38 430648.0 39 727615.0 40 444.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.650171764241904 24.319663113758782 29.08217699500794 12.947988126991374 2 29.199194628086307 26.47802870694218 31.130270982740548 13.192505682230962 3 28.64550143742281 25.968080910817516 31.542920303467458 13.843497348292216 4 24.567631521592478 28.341099913858415 31.410023559204177 15.681245005344929 5 22.920796446400217 32.55420173736157 30.442617251149418 14.082384565088788 6 20.38434195095119 41.7368167052401 27.024586676076513 10.854254667732192 7 88.96736479403859 4.099509096758793 5.398819964090376 1.5343061451122435 8 91.1377953981713 2.3627702302990046 4.557668157711747 1.9417662138179403 9 86.89869542204187 3.665843305345967 6.9240968106857075 2.511364461926458 10 55.599125092109226 16.848489408736626 14.671286830716221 12.881098668437932 11 50.15632621713906 20.760692453789712 15.88964536651687 13.193335962554356 12 41.96607785953733 21.503663611926978 22.253484582732245 14.276773945803454 13 20.376428341618837 44.11710066111071 22.839143565846417 12.667327431424036 14 15.495132481604102 45.23009143462061 26.40921922514089 12.865556858634397 15 13.294007451765902 23.717139061575665 50.19119799072161 12.797655495936816 16 15.322486066858323 18.008832106940105 47.62378960696605 19.044892219235518 17 15.64024991437734 19.577205691571617 27.400651770053862 37.381892623997174 18 21.800436935020187 23.790385353855097 33.50173321017508 20.90744450094963 19 30.237797473872114 24.61801915871846 24.448979274127428 20.695204093281994 20 31.225960790011726 24.249115232530382 23.428616649196186 21.096307328261705 21 21.98644567372059 29.501416665801795 27.681312465621204 20.830825194856413 22 22.284360632258466 26.101807935404192 25.086945917615434 26.52688551472191 23 19.362085249032205 33.59661868338298 22.721555115045717 24.3197409525391 24 19.993098294811787 25.774703434246987 36.98763920168547 17.244559069255757 25 16.18112565254844 26.389967100142186 35.568534451444165 21.860372795865203 26 16.68432742104553 35.709682106421184 27.474313202494994 20.1316772700383 27 19.188608553963032 33.15737444604734 27.45077994457879 20.203237055410835 28 15.35748757174141 28.72409265928409 38.914797671063695 17.003622097910807 29 15.39020580573516 25.76902120328376 37.66387657882993 21.17689641215115 30 18.287961973161188 30.011442300706776 31.5178821624651 20.182713563666933 31 28.318345043745396 26.425046443805588 24.163362842879827 21.09324566956919 32 29.571134266706796 27.276187560325056 25.681608252986415 17.471069919981733 33 26.992127904683823 27.12826793146036 24.828131973057406 21.051472190798417 34 18.640441916702127 26.579763992818073 30.33206023683746 24.447733853642337 35 19.399421917324837 25.997400184737373 32.084211181800256 22.518966716137538 36 31.555374508318373 22.39123327763536 26.687181509657197 19.36621070438907 37 20.83863501914834 30.526709080153186 29.53883117287474 19.095824727823732 38 20.951345573049103 32.723916224715374 24.271480908741815 22.053257293493715 39 21.296612456280553 31.6209147613463 26.144774942139843 20.93769784023331 40 24.036304007140412 25.16525173061555 24.932358099903478 25.86608616234056 41 17.148557906863303 23.43180803918923 26.78152211140286 32.6381119425446 42 22.61496787852999 26.665153134827147 24.31356574263386 26.40631324400901 43 21.949835500710925 27.860860585555198 25.555172127489545 24.634131786244332 44 19.972912104449264 31.289632912312022 27.703237055410835 21.034217927827882 45 17.36155075607402 36.1677114360736 22.58580428217077 23.88493352568161 46 22.314510186501717 31.90479279316679 26.343653025852852 19.437043994478636 47 22.31567776820649 26.165064917542786 28.24426847114257 23.274988843108154 48 24.600635164447397 21.878457339159134 30.31478002760682 23.20612746878665 49 21.5324120681245 21.414252799601467 32.352287941216154 24.70104719105788 50 18.778917106888212 32.16420350170726 26.3549655952591 22.701913796145423 51 18.477188048114744 33.63351426525381 23.474437744543504 24.414859942087947 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1255.0 1 1945.0 2 2635.0 3 8531.5 4 14428.0 5 11360.5 6 8293.0 7 9182.5 8 10072.0 9 11149.0 10 12226.0 11 12481.5 12 12737.0 13 12499.0 14 12261.0 15 12064.5 16 11868.0 17 11490.5 18 11113.0 19 10933.5 20 10754.0 21 11278.0 22 11802.0 23 12457.5 24 13113.0 25 15789.5 26 19654.5 27 20843.0 28 24915.0 29 28987.0 30 35002.0 31 41017.0 32 54208.5 33 67400.0 34 74543.5 35 81687.0 36 92667.0 37 103647.0 38 137762.5 39 171878.0 40 238074.0 41 304270.0 42 364473.0 43 424676.0 44 439923.5 45 455171.0 46 438614.0 47 422057.0 48 377411.5 49 332766.0 50 313526.5 51 294287.0 52 265569.0 53 236851.0 54 206693.0 55 176535.0 56 155801.0 57 135067.0 58 123644.5 59 112222.0 60 101062.0 61 89902.0 62 79554.0 63 69206.0 64 58024.0 65 46842.0 66 38975.5 67 31109.0 68 25533.0 69 19957.0 70 17231.5 71 14506.0 72 12286.5 73 10067.0 74 7906.5 75 4741.5 76 3737.0 77 2647.5 78 1558.0 79 1170.0 80 782.0 81 492.0 82 202.0 83 143.0 84 84.0 85 52.0 86 20.0 87 15.0 88 10.0 89 7.0 90 4.0 91 3.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3854120.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.96454968631714 #Duplication Level Percentage of deduplicated Percentage of total 1 76.96492821004014 13.056753487230576 2 9.925253717083207 3.3675491966552387 3 3.7085489542428367 1.8874158899517621 4 1.8418347051092212 1.2498358547523465 5 1.0411611336655182 0.8831414891765482 6 0.6270894543304852 0.6382974123453014 7 0.4686846176093435 0.556571643785238 8 0.34965523780558927 0.47453949238671633 9 0.26060228949590797 0.3978900439669202 >10 2.332948231241391 8.860581412873032 >50 0.8005458871934868 9.918008581756194 >100 1.6526500270097648 55.00025662356573 >500 0.023009069472170702 2.406895317919396 >1k 0.0027796191308662593 0.7833229232999681 >5k 1.544232850481255E-4 0.2074557449454014 >10k+ 1.544232850481255E-4 0.3114848853896732 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11890 0.3085010326611522 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7919 0.20546843377995494 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0795771797453115 0.0 2 0.0 0.0 0.0 0.274226023061036 0.0 3 0.0 0.0 0.0 0.41630774340186605 0.0 4 0.0 0.0 0.0 0.7048042095212396 0.0 5 0.0 0.0 0.0 1.1464095565265222 0.0 6 0.0 0.0 0.0 1.760868888358432 0.0 7 0.0 0.0 0.0 2.057201125029838 0.0 8 0.0 0.0 0.0 2.8561383662158937 0.0 9 0.0 2.594626010606831E-5 0.0 3.1816601455066267 0.0 10 0.0 2.594626010606831E-5 0.0 3.7312278808132597 0.0 11 0.0 2.594626010606831E-5 0.0 4.302434797048353 0.0 12 0.0 2.594626010606831E-5 0.0 4.766691229126233 0.0 13 0.0 2.594626010606831E-5 0.0 4.968630971531764 0.0 14 0.0 2.594626010606831E-5 0.0 5.043978910879786 0.0 15 0.0 2.594626010606831E-5 0.0 5.1586354342885015 0.0 16 0.0 2.594626010606831E-5 0.0 5.4192656170539575 0.0 17 0.0 2.594626010606831E-5 0.0 5.733033740516642 0.0 18 0.0 2.594626010606831E-5 0.0 6.150483119363175 0.0 19 0.0 2.594626010606831E-5 0.0 6.346040081782612 0.0 20 0.0 2.594626010606831E-5 0.0 6.570345500399572 0.0 21 0.0 2.594626010606831E-5 0.0 6.847373719552063 0.0 22 0.0 2.594626010606831E-5 0.0 7.131355536412982 0.0 23 0.0 2.594626010606831E-5 0.0 7.470032069577491 0.0 24 0.0 2.594626010606831E-5 0.0 7.715250173839943 0.0 25 0.0 2.594626010606831E-5 0.0 7.920952123960852 0.0 26 0.0 2.594626010606831E-5 0.0 8.121776177181822 0.0 27 0.0 2.594626010606831E-5 0.0 8.310353595632726 0.0 28 0.0 2.594626010606831E-5 0.0 8.523190767282804 0.0 29 0.0 2.594626010606831E-5 0.0 8.75128433987525 0.0 30 0.0 2.594626010606831E-5 0.0 9.022163295382603 0.0 31 0.0 2.594626010606831E-5 0.0 9.28608865318153 0.0 32 2.594626010606831E-5 2.594626010606831E-5 0.0 9.516465496663312 0.0 33 2.594626010606831E-5 2.594626010606831E-5 0.0 9.751953753385987 0.0 34 2.594626010606831E-5 2.594626010606831E-5 0.0 9.998235654312788 0.0 35 2.594626010606831E-5 2.594626010606831E-5 0.0 10.296098720330452 0.0 36 2.594626010606831E-5 2.594626010606831E-5 0.0 10.558519195043226 0.0 37 2.594626010606831E-5 2.594626010606831E-5 0.0 10.81725530082094 0.0 38 2.594626010606831E-5 2.594626010606831E-5 0.0 11.06631345157909 0.0 39 2.594626010606831E-5 2.594626010606831E-5 0.0 11.312517513725572 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCCG 170 0.0 45.000004 1 CCCGTAG 20 7.035356E-4 45.0 1 TACGCAT 35 1.2129203E-7 45.0 40 TACGACA 20 7.035356E-4 45.0 19 CCGCGTA 20 7.035356E-4 45.0 40 CAGTCGA 35 1.2129203E-7 45.0 39 TCGACAC 40 6.8230293E-9 45.0 14 TATCCGG 185 0.0 45.0 2 CACGCGA 30 2.1668384E-6 44.999996 28 ATATCGT 30 2.1668384E-6 44.999996 10 CTCGATT 30 2.1668384E-6 44.999996 37 ACGTTAG 115 0.0 43.04348 1 CGTTTTT 8530 0.0 41.96659 1 CGGTCGA 65 0.0 41.53846 11 GTACCGA 50 1.0822987E-9 40.5 9 GGCGTAT 50 1.0822987E-9 40.5 8 CTTATCG 45 1.9303116E-8 40.0 13 CTACGAT 45 1.9303116E-8 40.0 20 CGACGAA 40 3.4610457E-7 39.375 31 CGTTCGA 40 3.4610457E-7 39.375 14 >>END_MODULE