##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545384_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3716193 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.255639306139376 31.0 31.0 33.0 30.0 34.0 2 31.62059209518989 31.0 31.0 34.0 30.0 34.0 3 31.736101704082646 31.0 31.0 34.0 30.0 34.0 4 35.57560331231451 37.0 35.0 37.0 33.0 37.0 5 35.51687170176576 37.0 35.0 37.0 33.0 37.0 6 35.58042545153064 37.0 35.0 37.0 33.0 37.0 7 35.891474958378105 37.0 35.0 37.0 35.0 37.0 8 35.93445980873437 37.0 35.0 37.0 35.0 37.0 9 37.84336335599362 39.0 38.0 39.0 35.0 39.0 10 37.22776669564794 39.0 37.0 39.0 34.0 39.0 11 36.909564438660745 39.0 37.0 39.0 33.0 39.0 12 36.38559515073625 38.0 35.0 39.0 32.0 39.0 13 36.19396732085766 38.0 35.0 39.0 32.0 39.0 14 37.23628051610883 39.0 35.0 41.0 32.0 41.0 15 37.39998729882974 39.0 35.0 41.0 32.0 41.0 16 37.442272239358935 39.0 35.0 41.0 32.0 41.0 17 37.355680665670484 39.0 35.0 41.0 32.0 41.0 18 37.25262681459225 39.0 35.0 41.0 32.0 41.0 19 37.196679505074144 39.0 35.0 41.0 32.0 41.0 20 37.041540361332146 39.0 35.0 41.0 32.0 41.0 21 36.94347171957969 38.0 35.0 41.0 32.0 41.0 22 36.832328676147874 38.0 35.0 41.0 31.0 41.0 23 36.72178005824778 38.0 35.0 41.0 31.0 41.0 24 36.62885915774557 38.0 35.0 40.0 31.0 41.0 25 36.524259907921895 38.0 35.0 40.0 31.0 41.0 26 36.376966158646766 38.0 35.0 40.0 31.0 41.0 27 36.25249603559342 38.0 35.0 40.0 30.0 41.0 28 36.154699446449634 38.0 35.0 40.0 30.0 41.0 29 36.2554356030486 38.0 35.0 40.0 30.0 41.0 30 36.20618896811872 38.0 35.0 40.0 30.0 41.0 31 36.06736275537896 38.0 35.0 40.0 30.0 41.0 32 35.878652427363164 38.0 35.0 40.0 30.0 41.0 33 35.62595780143819 38.0 34.0 40.0 29.0 41.0 34 35.38079857531619 38.0 34.0 40.0 27.0 41.0 35 35.1999078088786 38.0 34.0 40.0 26.0 41.0 36 35.04903324450587 38.0 34.0 40.0 25.0 41.0 37 34.94444287473767 38.0 34.0 40.0 25.0 41.0 38 34.86677817863604 37.0 34.0 40.0 25.0 41.0 39 34.78955075799346 37.0 34.0 40.0 24.0 41.0 40 34.64516105595162 37.0 34.0 40.0 24.0 41.0 41 34.564927601984074 37.0 33.0 40.0 24.0 41.0 42 34.47963709096917 37.0 33.0 40.0 24.0 41.0 43 34.355105345712666 37.0 33.0 40.0 23.0 41.0 44 34.223858933053265 36.0 33.0 40.0 23.0 41.0 45 34.204173195525634 36.0 33.0 40.0 23.0 41.0 46 34.206450795208966 36.0 33.0 40.0 23.0 41.0 47 34.1848717222168 36.0 33.0 40.0 23.0 41.0 48 34.0924330356362 36.0 33.0 40.0 23.0 41.0 49 34.03014133011929 36.0 33.0 40.0 23.0 41.0 50 33.92127238816714 36.0 33.0 40.0 23.0 41.0 51 33.69439046895573 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 2.0 11 8.0 12 12.0 13 22.0 14 54.0 15 104.0 16 283.0 17 751.0 18 1702.0 19 3222.0 20 5786.0 21 9315.0 22 14035.0 23 21168.0 24 31684.0 25 46752.0 26 62937.0 27 71149.0 28 75272.0 29 82883.0 30 97104.0 31 116872.0 32 144814.0 33 187872.0 34 306021.0 35 417700.0 36 295619.0 37 373727.0 38 520631.0 39 828284.0 40 402.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.43787580462048 23.18194991487256 27.990069407051788 15.390104873455174 2 32.99497631043382 24.786064663487608 28.741079917001084 13.47787910907749 3 28.82638226808995 24.88638238110884 32.35714614391664 13.930089206884572 4 25.501205131165143 27.92731701502048 31.781018908329035 14.79045894548534 5 22.950261194722664 32.25833534480044 30.37928869679266 14.412114763684233 6 21.17465373838226 40.83644202548145 27.561162727554784 10.427741508581498 7 87.22305326983825 3.376170182764996 7.707511423653185 1.693265123743573 8 88.19170586672975 2.5886438083275007 7.426524940981268 1.7931253839614896 9 83.29295599017597 4.572394383176547 9.253179261679897 2.881470364967589 10 44.01652443777812 26.197105478644406 16.396430432972668 13.389939650604799 11 35.30500165088304 23.865418184685243 23.763459002263875 17.066121162167843 12 32.07629420753981 21.589755968002738 28.663096884365263 17.670852940092185 13 23.188488864814072 29.752087687587807 28.84387328645202 18.215550161146098 14 19.596936972864434 31.283278344262527 30.190870065144626 18.928914617728413 15 18.491074064237246 23.8488420811298 39.23477601943709 18.42530783519586 16 21.28751117070615 20.77537415306471 37.52660316619723 20.410511510031906 17 20.97283429574298 21.429618967583224 29.914135245397645 27.683411491276154 18 23.344508748603747 22.954755040978764 31.581648208260443 22.119088002157046 19 27.271188552370667 24.907559967956455 26.32869175524522 21.49255972442766 20 29.276735627024753 23.275943956624427 26.394888532430905 21.052431883919915 21 25.571303750908527 25.631042305929753 27.456216617382356 21.341437325779367 22 25.01796865770965 23.737599204347028 26.783592778954162 24.46083935898916 23 23.331969033901093 27.086133578099954 26.519290036873755 23.062607351125198 24 22.674764200890536 23.83907402010606 33.19394337161714 20.29221840738627 25 22.29601638020415 24.70991146046505 30.65588897024455 22.33818318908625 26 21.8353029565472 28.25935036205063 27.515094076114995 22.390252605287188 27 21.774514940424247 27.204372862227554 28.55400674830398 22.467105449044222 28 20.133023231032404 26.054728589177152 32.446431065340256 21.36581711445019 29 21.151646321921387 23.400776009211576 32.447695800514126 22.999881868352908 30 22.37717470540416 25.789161111922876 30.070504949554554 21.763159233118408 31 26.109569659056998 25.306435914388732 26.83988694882101 21.74410747773326 32 27.1037322334981 24.914152736416003 26.9621626218014 21.0199524082845 33 25.80675976732102 25.615784756066223 26.097164490649437 22.48029098596332 34 21.943101448175593 25.89504904616095 29.232389168162147 22.929460337501308 35 22.528808379973807 25.902502910909092 28.927211261632536 22.64147744748456 36 26.104752901692674 27.269627815347587 25.783698532342104 20.841920750617636 37 23.315366021086632 29.236721558864136 26.902235701967044 20.545676718082188 38 23.214913757170308 29.38622940197132 25.72578980693414 21.673067033924234 39 23.383311900108524 29.02505332742406 25.529836582760908 22.061798189706508 40 24.266581418134095 26.037318298592133 26.454761633747225 23.241338649526543 41 21.23702940078731 25.26273527774257 27.115733763020383 26.384501558449735 42 23.384468998246323 26.515549649870174 25.27070041841207 24.82928093347143 43 23.121242626526666 26.133895629209785 26.51450018876845 24.2303615554951 44 22.321714722566885 27.806898080912372 27.09234961693324 22.779037579587495 45 21.112520259308383 29.170820783527656 25.33875393447003 24.377905022693923 46 22.62325987912899 28.55145036869721 26.43753970797534 22.387750044198455 47 23.32432680433982 26.29389808333421 27.460791191415517 22.92098392091046 48 23.759826252296367 23.797310850109238 28.648162245609953 23.79470065198444 49 22.62511661800127 24.625820026032017 29.321593361808713 23.427469994158002 50 21.12446797031263 28.074779754442247 27.975995864585073 22.82475641066005 51 20.709715561059397 28.667429275067253 26.29801519996405 24.3248399639093 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1022.0 1 2743.0 2 4464.0 3 21227.5 4 37991.0 5 27978.0 6 17965.0 7 18062.5 8 18160.0 9 18290.0 10 18420.0 11 18563.0 12 18706.0 13 18821.5 14 18937.0 15 18422.0 16 17907.0 17 17047.0 18 16187.0 19 15339.5 20 14492.0 21 14653.5 22 14815.0 23 15842.5 24 16870.0 25 18360.0 26 23819.0 27 27788.0 28 32145.5 29 36503.0 30 43602.5 31 50702.0 32 58821.5 33 66941.0 34 79859.5 35 92778.0 36 96851.5 37 100925.0 38 117380.5 39 133836.0 40 162640.0 41 191444.0 42 222905.5 43 254367.0 44 272216.0 45 290065.0 46 288557.0 47 287049.0 48 281052.5 49 275056.0 50 259762.5 51 244469.0 52 234186.0 53 223903.0 54 216995.0 55 210087.0 56 201690.5 57 193294.0 58 184178.5 59 175063.0 60 168583.5 61 162104.0 62 150384.5 63 138665.0 64 117290.5 65 95916.0 66 85674.0 67 75432.0 68 63411.0 69 51390.0 70 44122.5 71 36855.0 72 30938.5 73 25022.0 74 21799.5 75 14847.5 76 11118.0 77 8030.5 78 4943.0 79 4128.0 80 3313.0 81 2504.0 82 1695.0 83 1089.5 84 484.0 85 438.5 86 393.0 87 243.0 88 93.0 89 95.5 90 98.0 91 58.5 92 19.0 93 15.0 94 11.0 95 9.0 96 7.0 97 4.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3716193.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.083532985518822 #Duplication Level Percentage of deduplicated Percentage of total 1 78.65577782973135 15.796859085450496 2 7.1695130272694 2.8797830274654377 3 2.3789321198162137 1.4333208509591744 4 1.2517547192689507 1.005586287768673 5 0.8415859111918542 0.8451009203784758 6 0.6073926431736287 0.7319154110603421 7 0.5026688780582443 0.7066756895293542 8 0.4025008411108634 0.6466911135319278 9 0.35309146353003534 0.6382191649239523 >10 4.984110050348281 24.856339317134413 >50 2.1493864528620423 30.911618001481944 >100 0.6990697489372738 18.164244515616492 >500 0.0028562131851139726 0.3782670336075107 >1k 0.0010880812133767473 0.33243138352133095 >5k 1.3601015167209342E-4 0.13761621283323464 >10k+ 1.3601015167209342E-4 0.5353319847371442 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19598 0.5273676582459522 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5038 0.13556884693556012 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.034390033025733596 0.0 2 0.0 0.0 0.0 0.10763703607428354 0.0 3 0.0 0.0 0.0 0.19326229827137612 0.0 4 0.0 0.0 0.0 0.3134928675663508 0.0 5 0.0 0.0 0.0 0.5344986118858736 0.0 6 0.0 0.0 0.0 0.9859552504404373 0.0 7 0.0 0.0 0.0 1.238068098185428 0.0 8 0.0 0.0 0.0 1.8035661764606952 0.0 9 0.0 0.0 0.0 2.1281725680017156 0.0 10 0.0 0.0 0.0 2.5021843591008324 0.0 11 0.0 0.0 0.0 2.827113661750076 0.0 12 0.0 0.0 0.0 3.096125524158729 0.0 13 0.0 0.0 0.0 3.238340958071876 0.0 14 0.0 0.0 0.0 3.310457772241646 0.0 15 0.0 0.0 0.0 3.384027686398419 0.0 16 0.0 0.0 0.0 3.515533235222175 0.0 17 0.0 0.0 0.0 3.6634265227882405 0.0 18 0.0 0.0 0.0 3.8538095303446296 0.0 19 0.0 0.0 0.0 3.9641105830617516 0.0 20 0.0 0.0 0.0 4.082026956081129 0.0 21 0.0 0.0 0.0 4.237185743582209 0.0 22 0.0 0.0 0.0 4.411477014245492 0.0 23 0.0 0.0 0.0 4.600783651441139 0.0 24 0.0 0.0 0.0 4.7557002556110515 0.0 25 0.0 0.0 0.0 4.88771708035616 0.0 26 0.0 0.0 0.0 5.0113382162874744 0.0 27 0.0 0.0 0.0 5.138941922553538 0.0 28 0.0 0.0 0.0 5.27919298055833 0.0 29 0.0 0.0 0.0 5.4246644348127235 0.0 30 0.0 0.0 0.0 5.624465683025613 0.0 31 0.0 0.0 0.0 5.784710320481202 0.0 32 0.0 0.0 0.0 5.9511440875110635 0.0 33 0.0 0.0 0.0 6.114510199012807 0.0 34 0.0 0.0 0.0 6.2846843530462495 0.0 35 0.0 0.0 0.0 6.476601188366697 0.0 36 0.0 0.0 0.0 6.657054679345233 0.0 37 0.0 0.0 0.0 6.842782385091409 0.0 38 0.0 0.0 0.0 7.033945761159337 0.0 39 0.0 0.0 0.0 7.232374637162279 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 20 7.035322E-4 45.000004 24 CGTTTTT 17160 0.0 42.364513 1 CGTAAGG 510 0.0 40.14706 2 TATCGTG 150 0.0 39.0 1 GCGATAT 335 0.0 38.283585 9 GGGCGAT 8420 0.0 37.57126 7 TAATACG 90 0.0 37.5 1 GTCGATA 30 1.14041264E-4 37.499996 15 CGCATCG 60 1.5643309E-10 37.499996 21 GGCGATA 1830 0.0 37.13115 8 ATAGGGA 4095 0.0 37.032967 4 ACGTTAG 195 0.0 36.92308 1 CATACGA 1580 0.0 36.88291 18 ATACTAT 2640 0.0 36.81818 45 CGAATAT 450 0.0 36.5 14 TATGGGC 1610 0.0 36.335403 4 AGGGATT 3170 0.0 36.26972 6 TAAGGGC 1795 0.0 36.225628 4 TAAGGGA 3480 0.0 36.14224 4 TAGGGTA 1715 0.0 36.078716 5 >>END_MODULE