##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545383_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5634292 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.238863019524015 31.0 31.0 33.0 30.0 34.0 2 31.60696800946774 31.0 31.0 34.0 30.0 34.0 3 31.7952819981641 31.0 31.0 34.0 30.0 34.0 4 35.58387389222994 37.0 35.0 37.0 33.0 37.0 5 35.497505809070596 37.0 35.0 37.0 33.0 37.0 6 35.54488922476861 37.0 35.0 37.0 33.0 37.0 7 35.86719271915619 37.0 35.0 37.0 35.0 37.0 8 35.90033352903967 37.0 35.0 37.0 35.0 37.0 9 37.794880528023754 39.0 37.0 39.0 35.0 39.0 10 37.19057088273025 39.0 37.0 39.0 33.0 39.0 11 36.81561410022768 39.0 35.0 39.0 32.0 39.0 12 36.05351018371075 37.0 35.0 39.0 32.0 39.0 13 35.71854831095016 37.0 35.0 39.0 31.0 39.0 14 36.700087961362314 38.0 35.0 41.0 31.0 41.0 15 36.958274260545956 38.0 35.0 41.0 32.0 41.0 16 37.058848387694496 38.0 35.0 41.0 32.0 41.0 17 36.98778267083069 38.0 35.0 41.0 32.0 41.0 18 36.943078030034656 38.0 35.0 41.0 32.0 41.0 19 36.90327054401866 38.0 35.0 41.0 32.0 41.0 20 36.77936127556044 38.0 35.0 41.0 31.0 41.0 21 36.665504556739336 38.0 35.0 41.0 31.0 41.0 22 36.530411806842814 38.0 35.0 40.0 31.0 41.0 23 36.44849113251497 38.0 35.0 40.0 31.0 41.0 24 36.33169331656932 38.0 35.0 40.0 31.0 41.0 25 36.18938670555236 38.0 35.0 40.0 30.0 41.0 26 36.01228814552032 38.0 35.0 40.0 30.0 41.0 27 35.8864663031309 37.0 34.0 40.0 30.0 41.0 28 35.810803202957885 37.0 34.0 40.0 30.0 41.0 29 35.947624475266814 37.0 35.0 40.0 30.0 41.0 30 35.955072083590984 37.0 35.0 40.0 30.0 41.0 31 35.83645647048467 37.0 35.0 40.0 30.0 41.0 32 35.720757816598784 37.0 34.0 40.0 30.0 41.0 33 35.54264954673986 37.0 34.0 40.0 29.0 41.0 34 35.4106961442538 37.0 34.0 40.0 29.0 41.0 35 35.28702506011403 37.0 34.0 40.0 28.0 41.0 36 35.134858825208205 37.0 34.0 40.0 27.0 41.0 37 35.0349804376486 37.0 34.0 40.0 27.0 41.0 38 34.9865855372778 36.0 34.0 40.0 27.0 41.0 39 34.917488834444505 36.0 34.0 40.0 27.0 41.0 40 34.729645357393615 36.0 33.0 40.0 26.0 41.0 41 34.6625052446696 36.0 34.0 40.0 26.0 41.0 42 34.59701999825355 36.0 33.0 40.0 26.0 41.0 43 34.46793794144855 35.0 33.0 40.0 26.0 41.0 44 34.353456121904934 35.0 33.0 40.0 25.0 41.0 45 34.314889608135324 35.0 33.0 40.0 25.0 41.0 46 34.31155538264613 35.0 33.0 40.0 25.0 41.0 47 34.27669581200264 35.0 33.0 40.0 25.0 41.0 48 34.195957362522215 35.0 33.0 40.0 25.0 41.0 49 34.157505858766285 35.0 33.0 39.0 25.0 41.0 50 34.03244649017126 35.0 33.0 39.0 24.0 41.0 51 33.76364732250299 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 4.0 11 14.0 12 14.0 13 21.0 14 69.0 15 180.0 16 463.0 17 1174.0 18 2607.0 19 5144.0 20 8766.0 21 13798.0 22 20539.0 23 29360.0 24 42069.0 25 58974.0 26 77501.0 27 94520.0 28 109833.0 29 128124.0 30 154961.0 31 191331.0 32 239055.0 33 312174.0 34 537991.0 35 777073.0 36 440868.0 37 541552.0 38 733920.0 39 1111503.0 40 686.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.75687664040131 24.011393090737933 29.134290519554185 13.097439749306567 2 30.57716923439538 25.722947976427207 30.488480185265516 13.211402603911903 3 29.92134592953294 25.654208195102417 30.07258054783103 14.351865327533611 4 26.66908282353843 28.005825754149765 29.52465012462968 15.800441297682122 5 24.163053672049656 32.79306432822438 27.971784209977045 15.072097789748916 6 22.911041884233192 41.55175131143363 24.7027488103208 10.834457994012379 7 88.41313158778424 4.3087578705541 5.2957851669739515 1.982325374687716 8 89.55524491808376 3.334704697591108 5.000202332431475 2.109848051893654 9 84.87350318371855 5.023736788934617 6.878929952512223 3.223830074834602 10 52.08508895172632 21.779648623110056 12.664146622148797 13.471115803014824 11 43.371270072619595 22.137848020656367 18.320598222456344 16.170283684267694 12 38.017962150346484 21.106751300784556 24.17375599276715 16.70153055610181 13 23.315759992559844 33.85190188935895 25.11232999638641 17.720008121694793 14 19.213984649712863 35.89389758287288 27.097743602922957 17.7943741644913 15 17.651552315712426 22.654807383074925 42.10646164593528 17.587178655277363 16 19.76278474740038 17.63728255475577 40.986711373851406 21.613221323992438 17 20.163917667028972 18.634231239701457 27.50893989874859 33.69291119452098 18 23.934400276024032 22.701077615430652 30.82314512630868 22.54137698223663 19 30.821263789665142 23.30883809358833 23.626943722476575 22.242954394269944 20 32.5042614049822 22.078159953371248 23.136429563820972 22.28114907782557 21 26.5240956627736 25.556431935015084 24.987984293323812 22.931488108887503 22 25.928155658244194 23.880817678600966 23.232768198737304 26.958258464417533 23 24.099673925313063 28.370077376181424 23.08231451263087 24.44793418587464 24 23.57849042967599 23.12125463146035 32.404319832908904 20.89593510595475 25 22.226679057457442 23.588553805873037 30.83780535336117 23.346961783308355 26 20.920853942252194 30.03314347215231 25.055339694854297 23.990662890741195 27 22.10629126072983 29.271770082203762 26.13618534502649 22.485753312039915 28 19.66925036899046 26.891683995078708 32.631642094516934 20.8074235414139 29 20.24641250400228 24.04891333285531 32.16972070315134 23.53495345999107 30 22.155472240345368 26.634544322516472 28.78303076943829 22.426952667699865 31 28.770393866700555 25.265871914341677 23.457907399900467 22.5058268190573 32 30.321644671593166 24.459204457276975 24.230284834367833 20.988866036762026 33 27.84591213944893 25.470298663967007 23.946203001193407 22.737586195390655 34 22.09061937151997 25.120884753576846 27.130187785794558 25.658308089108623 35 23.295757479378064 23.23970784616772 29.31835978681971 24.146174887634505 36 29.65126763043165 24.526098398876027 24.32184913383971 21.500784836852617 37 23.43930701497189 28.674676427845768 26.529207218937177 21.35680933824516 38 23.313843158998505 29.392299866602585 23.26173368366425 24.032123290734667 39 23.496918512565554 28.19635546045537 24.737553538226276 23.569172488752802 40 25.194611851852905 24.518289076959448 25.502600859167394 24.78449821202025 41 20.372586298331715 23.59572418326917 26.54960019821479 29.48208932018433 42 23.80396685155828 25.880483297635266 23.335212303515686 26.980337547290766 43 23.902896761474203 25.416201361235803 24.896437742310834 25.784464134979157 44 22.596539192501915 27.512720320494573 26.194879498613133 23.695860988390375 45 20.921989843621876 30.317846501388285 23.605432590288185 25.15473106470165 46 23.547111154338467 29.092563892677198 25.211526133185856 22.148798819798476 47 23.967927114888614 25.03432551951514 26.911384784459162 24.08636258113708 48 25.0635217344078 22.222295188108816 28.37259765734541 24.34158542013797 49 22.587735956886863 23.270785397703918 29.19003842896321 24.951440216446006 50 21.418219006043703 28.860786767884942 26.482972483499257 23.238021742572094 51 20.957770736766925 29.54232758969539 24.35390285061548 25.145998822922206 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1564.0 1 4315.0 2 7066.0 3 16507.5 4 25949.0 5 19745.5 6 13542.0 7 13676.5 8 13811.0 9 14752.0 10 15693.0 11 15824.5 12 15956.0 13 15494.5 14 15033.0 15 15343.5 16 15654.0 17 14985.0 18 14316.0 19 14805.0 20 15294.0 21 14480.5 22 13667.0 23 15205.0 24 16743.0 25 19719.0 26 24237.0 27 25779.0 28 34544.0 29 43309.0 30 52909.0 31 62509.0 32 73148.0 33 83787.0 34 91092.0 35 98397.0 36 107204.0 37 116011.0 38 141493.5 39 166976.0 40 232867.5 41 298759.0 42 366233.0 43 433707.0 44 444016.0 45 454325.0 46 450173.5 47 446022.0 48 432288.0 49 418554.0 50 414898.0 51 411242.0 52 390666.0 53 370090.0 54 345423.5 55 320757.0 56 314251.0 57 307745.0 58 301340.0 59 294935.0 60 287486.5 61 280038.0 62 257562.5 63 235087.0 64 202152.5 65 169218.0 66 145753.5 67 122289.0 68 107225.0 69 92161.0 70 78833.5 71 65506.0 72 55121.0 73 44736.0 74 37424.5 75 23615.0 76 17117.0 77 13621.0 78 10125.0 79 7244.5 80 4364.0 81 3074.5 82 1785.0 83 1398.5 84 1012.0 85 749.0 86 486.0 87 333.5 88 181.0 89 136.0 90 91.0 91 79.5 92 68.0 93 44.5 94 21.0 95 11.5 96 2.0 97 3.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5634292.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.131401296027827 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94149885274891 11.94495498050864 2 9.223084403405563 2.7911638259013 3 3.131745362241972 1.4216308749917193 4 1.4598267593585048 0.8835689807413354 5 0.7992884546318108 0.604717717915793 6 0.5094378830015478 0.4625105425857176 7 0.39435077085965087 0.41769558356927056 8 0.27576852672216756 0.33382113941179925 9 0.20483371736766667 0.2789479058802578 >10 1.9828156932092957 6.928803659246919 >50 0.9362071567726514 10.53376132727083 >100 2.1165043296394996 59.843906373077346 >500 0.01930773402228874 1.8894238157455303 >1k 0.005093451306493334 1.2468304462180482 >5k 0.0 0.0 >10k+ 2.369047119299225E-4 0.4182628269355467 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12834 0.22778372153945872 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 10502 0.18639431538159543 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04321749742469861 0.0 2 0.0 0.0 0.0 0.15797903268059235 0.0 3 0.0 0.0 0.0 0.24033188198268746 0.0 4 1.77484589013136E-5 0.0 0.0 0.3935188307599251 0.0 5 1.77484589013136E-5 0.0 0.0 0.66489276736101 0.0 6 1.77484589013136E-5 0.0 0.0 1.0194892277503544 0.0 7 1.77484589013136E-5 0.0 0.0 1.2101254248093638 0.0 8 1.77484589013136E-5 0.0 0.0 1.6793059358655889 0.0 9 1.77484589013136E-5 0.0 0.0 1.8841054031278464 0.0 10 1.77484589013136E-5 0.0 0.0 2.1952358876678737 0.0 11 1.77484589013136E-5 0.0 0.0 2.538295849771364 0.0 12 1.77484589013136E-5 0.0 0.0 2.8159704892824156 0.0 13 1.77484589013136E-5 0.0 0.0 2.93641153138673 0.0 14 3.54969178026272E-5 0.0 0.0 2.984012898160053 0.0 15 3.54969178026272E-5 0.0 0.0 3.0572430395868726 0.0 16 5.3245376703940796E-5 0.0 0.0 3.2216647628486417 0.0 17 5.3245376703940796E-5 0.0 0.0 3.4054678032306454 0.0 18 5.3245376703940796E-5 0.0 0.0 3.636641480420255 0.0 19 5.3245376703940796E-5 0.0 0.0 3.750409101977675 0.0 20 5.3245376703940796E-5 0.0 0.0 3.881357231751567 0.0 21 5.3245376703940796E-5 0.0 0.0 4.048565463060842 0.0 22 5.3245376703940796E-5 0.0 0.0 4.225908064402768 0.0 23 5.3245376703940796E-5 0.0 0.0 4.43116899159646 0.0 24 1.597361301118224E-4 0.0 0.0 4.582403609894553 0.0 25 1.597361301118224E-4 0.0 0.0 4.7139019418943855 0.0 26 1.597361301118224E-4 0.0 0.0 4.836348559854548 0.0 27 1.597361301118224E-4 0.0 0.0 4.9548905168564215 1.77484589013136E-5 28 1.597361301118224E-4 0.0 0.0 5.086158118890537 1.77484589013136E-5 29 1.597361301118224E-4 0.0 0.0 5.22321171852648 1.77484589013136E-5 30 1.597361301118224E-4 0.0 0.0 5.397253106512761 1.77484589013136E-5 31 1.597361301118224E-4 0.0 0.0 5.561852314363544 1.77484589013136E-5 32 1.597361301118224E-4 0.0 0.0 5.715926686085847 1.77484589013136E-5 33 1.597361301118224E-4 0.0 0.0 5.864694268596658 1.77484589013136E-5 34 1.597361301118224E-4 0.0 0.0 6.022300583640322 1.77484589013136E-5 35 1.597361301118224E-4 0.0 0.0 6.217675619225982 1.77484589013136E-5 36 1.597361301118224E-4 0.0 0.0 6.390385872794665 1.77484589013136E-5 37 1.597361301118224E-4 0.0 0.0 6.562900893315433 1.77484589013136E-5 38 1.597361301118224E-4 0.0 0.0 6.729931640035696 1.77484589013136E-5 39 1.597361301118224E-4 0.0 0.0 6.8963589391533135 1.77484589013136E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACGC 20 7.0356345E-4 45.0 10 GTCGTTA 105 0.0 40.714287 9 TATAGCG 360 0.0 40.0 1 GTATTCG 35 6.2526306E-6 38.57143 1 CGCGAAA 35 6.2526306E-6 38.57143 26 TAGCATA 2140 0.0 38.271027 30 CGAATAT 500 0.0 38.25 14 GTTGATC 2250 0.0 37.8 16 GGGCGAT 14135 0.0 37.629997 7 TATCGGC 30 1.1404875E-4 37.499996 10 TGGGCGA 3835 0.0 37.49022 6 AGGGATC 3015 0.0 37.46269 6 CGTTTTT 11185 0.0 37.456417 1 GGCACCG 3170 0.0 37.40536 8 ATAGGGC 2390 0.0 37.374477 4 TAGCCGT 500 0.0 37.35 44 TAGGGCG 3085 0.0 37.19611 5 GGACTAA 3350 0.0 37.074627 8 GGTACCT 2395 0.0 37.014614 8 GGCGATT 3995 0.0 36.946182 8 >>END_MODULE