##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545382_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4121223 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16582529021118 31.0 31.0 33.0 30.0 33.0 2 31.521102352384233 31.0 31.0 34.0 30.0 34.0 3 31.710997439352347 31.0 31.0 34.0 30.0 34.0 4 35.49734556950692 37.0 35.0 37.0 33.0 37.0 5 35.40594187696225 37.0 35.0 37.0 33.0 37.0 6 35.4600226680284 37.0 35.0 37.0 33.0 37.0 7 35.809411914861194 37.0 35.0 37.0 35.0 37.0 8 35.84485673306201 37.0 35.0 37.0 35.0 37.0 9 37.74539087062263 39.0 37.0 39.0 35.0 39.0 10 37.09087714981693 39.0 37.0 39.0 33.0 39.0 11 36.73899349780393 39.0 35.0 39.0 32.0 39.0 12 36.06755810107825 38.0 35.0 39.0 32.0 39.0 13 35.76940340282484 38.0 35.0 39.0 31.0 39.0 14 36.78016137442696 39.0 35.0 41.0 31.0 41.0 15 37.0190967584137 39.0 35.0 41.0 32.0 41.0 16 37.104113269289236 39.0 35.0 41.0 32.0 41.0 17 37.029115629025654 38.0 35.0 41.0 32.0 41.0 18 36.964651755073675 38.0 35.0 41.0 32.0 41.0 19 36.89165158012561 38.0 35.0 41.0 31.0 41.0 20 36.75292188750767 38.0 35.0 41.0 31.0 41.0 21 36.65038339347325 38.0 35.0 41.0 31.0 41.0 22 36.527926540252736 38.0 35.0 40.0 31.0 41.0 23 36.44687778360938 38.0 35.0 40.0 31.0 41.0 24 36.340399439680894 38.0 35.0 40.0 30.0 41.0 25 36.17396001138497 38.0 35.0 40.0 30.0 41.0 26 35.98490763542764 38.0 35.0 40.0 30.0 41.0 27 35.88391115938157 38.0 34.0 40.0 30.0 41.0 28 35.81365895512084 38.0 34.0 40.0 29.0 41.0 29 35.94875453233178 38.0 35.0 40.0 30.0 41.0 30 35.932699832064415 38.0 35.0 40.0 30.0 41.0 31 35.83160969450088 38.0 34.0 40.0 30.0 41.0 32 35.70835235074637 38.0 34.0 40.0 29.0 41.0 33 35.499000660726196 37.0 34.0 40.0 29.0 41.0 34 35.3521804085826 37.0 34.0 40.0 27.0 41.0 35 35.241277649862674 37.0 34.0 40.0 27.0 41.0 36 35.080247295523684 37.0 34.0 40.0 26.0 41.0 37 34.986936644777536 37.0 34.0 40.0 26.0 41.0 38 34.92976502363497 37.0 33.0 40.0 26.0 41.0 39 34.855546763667 37.0 33.0 40.0 26.0 41.0 40 34.708110189620896 36.0 33.0 40.0 25.0 41.0 41 34.644712018738126 36.0 33.0 40.0 25.0 41.0 42 34.55179688165382 36.0 33.0 40.0 25.0 41.0 43 34.42364341847068 36.0 33.0 40.0 25.0 41.0 44 34.295853682268586 35.0 33.0 40.0 24.0 41.0 45 34.24672724577146 35.0 33.0 40.0 24.0 41.0 46 34.25155178450669 35.0 33.0 40.0 24.0 41.0 47 34.218846687014995 35.0 33.0 40.0 24.0 41.0 48 34.12858464586847 35.0 33.0 40.0 24.0 41.0 49 34.07044219640626 35.0 33.0 39.0 24.0 41.0 50 33.93092511616091 35.0 33.0 39.0 24.0 41.0 51 33.68512041207185 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 9.0 12 12.0 13 20.0 14 53.0 15 135.0 16 334.0 17 987.0 18 2015.0 19 4050.0 20 7017.0 21 11134.0 22 16592.0 23 23814.0 24 33374.0 25 46088.0 26 60240.0 27 72696.0 28 83904.0 29 98289.0 30 117486.0 31 142105.0 32 175019.0 33 223962.0 34 371616.0 35 524659.0 36 323029.0 37 408064.0 38 551933.0 39 822148.0 40 431.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.924098987121056 23.406644095696834 28.721401389830152 12.947855527351953 2 30.193464415781428 25.47452540180427 30.60919052426913 13.722819658145166 3 30.061319176370706 25.31037509981867 30.56626637287038 14.062039350940243 4 26.337618711727078 28.155695530186065 29.915561472892875 15.591124285193983 5 23.65843828397541 33.06460242505683 28.39181475984192 14.885144531125832 6 22.468985541427873 41.40664069864698 25.313990531451463 10.810383228473684 7 89.15989258528354 3.8478383722501794 5.221823715921221 1.770445326545057 8 90.02878514460392 2.9523275008413763 5.042144043163886 1.976743311390818 9 85.55382710423581 4.416989811034249 6.966621316051085 3.0625617686788607 10 50.69672279320968 22.137797445078803 12.969887822134352 14.19559193957716 11 39.69588639100577 22.04386901655164 20.09553960074473 18.164704991697853 12 35.03045091226561 20.247242141471112 26.85164088427149 17.87066606199179 13 22.186108346963994 31.979997199860332 27.49341639605525 18.340478057120425 14 18.573515677263764 33.59170323954807 28.64957805001088 19.185203033177288 15 17.50487658639195 21.972822145270953 42.03858903048925 18.483712237847843 16 19.56506600103901 17.772612644353387 40.40074997154971 22.261571383057895 17 20.253623742272623 18.95570805074125 28.152808037808196 32.637860169177934 18 24.109469446326976 21.6071782575221 30.724932865802213 23.55841943034871 19 29.79591252402503 23.556041495449286 24.333990177187694 22.31405580333799 20 32.5883360352012 21.517010848478716 23.595714184842702 22.29893893147738 21 25.487118750914473 25.1517571361705 25.013909705929528 24.347214406985497 22 25.370575676200975 23.094212567483 23.416544069563816 28.118667686752207 23 23.75343435674313 27.559852985388076 23.348239102810016 25.338473555058776 24 24.035704935161238 23.239970270960832 32.38528951236077 20.339035281517162 25 22.714034159277478 23.936535343998614 30.516936356028296 22.832494140695616 26 22.036977858271683 28.207840245480533 26.384522264386078 23.370659631861706 27 21.871978293822004 27.4855061228184 27.39121372466377 23.25130185869583 28 20.03601843433369 25.26269507862108 33.188764597305216 21.51252188974001 29 20.45057984001351 22.67576881911025 32.0489815765854 24.824669764290842 30 22.51972290749615 26.387361227480287 28.199420414765232 22.89349545025833 31 28.437432286483894 25.245637035414003 23.440444741767188 22.876485936334916 32 29.94970182394886 24.653118746546838 24.538565372463466 20.858614057040832 33 28.427095549063957 25.24296792481261 24.078119529081537 22.2518169970419 34 22.760039920188742 25.251266432318758 26.761012447033323 25.227681200459184 35 23.33203032206702 24.170276638755052 28.329575953545827 24.168117085632105 36 28.95196401650675 25.240614254555023 25.09886021697928 20.70856151195895 37 24.036214492639687 28.748723376531675 27.17234665534964 20.042715475479003 38 23.62502587217435 28.79048282512254 24.362112897069633 23.222378405633474 39 23.37801181833645 27.96526662109767 25.82015096004269 22.836570600523196 40 24.8438388313372 24.688205418634226 25.6128095955982 24.855146154430372 41 20.484404750725695 23.14963300942463 26.32313272055407 30.042829519295605 42 23.12779483177688 25.63772938275847 23.617940596759748 27.616535188704905 43 23.518746740955294 25.72505782870764 25.49862019114229 25.257575239194775 44 22.76765901772362 26.996306678866926 26.407864849827344 23.828169453582106 45 20.760754756537075 30.437663771166957 23.89137884555143 24.91020262674454 46 22.98960769655027 28.38834491606011 26.38937519275225 22.232672194637367 47 23.869395080052694 25.128560138580227 27.559610338969765 23.442434442397317 48 24.46111263573944 22.834847810953203 28.422169826772297 24.28186972653506 49 21.982091238450334 23.793179840062038 29.601577007601872 24.623151913885756 50 21.60169444846833 28.56059960841721 27.21973550084526 22.6179704422692 51 21.918250965793405 28.99838227632914 24.40188264503037 24.681484112847084 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1243.0 1 3099.0 2 4955.0 3 13062.5 4 21170.0 5 15777.0 6 10384.0 7 10524.0 8 10664.0 9 10842.0 10 11020.0 11 11041.5 12 11063.0 13 10841.0 14 10619.0 15 10752.5 16 10886.0 17 10245.0 18 9604.0 19 9788.5 20 9973.0 21 10003.0 22 10033.0 23 10880.0 24 11727.0 25 13718.5 26 19298.5 27 22887.0 28 29254.0 29 35621.0 30 40669.5 31 45718.0 32 54112.5 33 62507.0 34 75388.0 35 88269.0 36 93322.0 37 98375.0 38 117794.0 39 137213.0 40 177173.0 41 217133.0 42 259516.5 43 301900.0 44 311040.5 45 320181.0 46 315783.0 47 311385.0 48 303606.0 49 295827.0 50 284112.5 51 272398.0 52 273587.0 53 274776.0 54 263422.5 55 252069.0 56 239214.0 57 226359.0 58 220087.5 59 213816.0 60 208669.0 61 203522.0 62 185404.5 63 167287.0 64 149161.0 65 131035.0 66 114625.0 67 98215.0 68 84540.0 69 70865.0 70 60935.5 71 51006.0 72 41403.0 73 31800.0 74 25946.5 75 15507.5 76 10922.0 77 8622.5 78 6323.0 79 4370.5 80 2418.0 81 1913.0 82 1408.0 83 929.0 84 450.0 85 289.0 86 128.0 87 136.0 88 144.0 89 102.0 90 60.0 91 38.0 92 16.0 93 17.0 94 18.0 95 18.0 96 18.0 97 14.0 98 10.0 99 5.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4121223.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.675949141383324 #Duplication Level Percentage of deduplicated Percentage of total 1 79.98030806877843 13.337475496671193 2 8.01342356552224 2.6726288765402297 3 2.5530069451382804 1.2772144192417312 4 1.126913343778277 0.7516939843037107 5 0.6682592011022985 0.5571928225421691 6 0.43967827434722784 0.4399231524951333 7 0.3332279597390792 0.38898247563670696 8 0.25346203965441627 0.3381376066038663 9 0.2087698592574466 0.313329199970784 >10 2.7617766994352135 11.658746985919914 >50 1.7720379375686064 21.947726537277216 >100 1.8820755123313715 44.85177071150415 >500 0.005001253620905926 0.5538784412215368 >1k 0.001765148336790327 0.4860540882553035 >5k 1.4709569473252726E-4 0.1577744080574369 >10k+ 1.4709569473252726E-4 0.26747079375906274 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10904 0.2645816545234267 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6432 0.1560701762559318 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 4472 0.10851147826749485 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04894178257279453 0.0 2 0.0 0.0 0.0 0.16189369029533224 0.0 3 0.0 0.0 0.0 0.2365317285669812 0.0 4 0.0 0.0 0.0 0.37202548855036477 0.0 5 0.0 0.0 0.0 0.6321909782605795 0.0 6 0.0 0.0 0.0 0.9464666192535566 0.0 7 0.0 0.0 0.0 1.118333077341362 0.0 8 0.0 0.0 0.0 1.5482297366582687 0.0 9 0.0 0.0 0.0 1.731136606779104 0.0 10 0.0 0.0 0.0 2.0056182351695115 0.0 11 0.0 0.0 0.0 2.2977402581709363 0.0 12 0.0 0.0 0.0 2.534466103872564 0.0 13 0.0 0.0 0.0 2.637275391309813 0.0 14 0.0 0.0 0.0 2.680951746605316 0.0 15 0.0 0.0 0.0 2.750008917255873 0.0 16 0.0 0.0 0.0 2.9037254232542136 0.0 17 0.0 0.0 0.0 3.084157299908304 0.0 18 0.0 0.0 0.0 3.3030728985060986 0.0 19 0.0 0.0 0.0 3.4189608278901678 0.0 20 0.0 0.0 0.0 3.540648006671806 0.0 21 0.0 0.0 0.0 3.704604191522759 0.0 22 0.0 0.0 0.0 3.8783147623897083 0.0 23 0.0 0.0 0.0 4.075804682250875 0.0 24 0.0 0.0 0.0 4.234325587331722 0.0 25 0.0 0.0 0.0 4.362127455854731 0.0 26 2.4264641830835167E-5 0.0 0.0 4.485513159564527 0.0 27 2.4264641830835167E-5 0.0 0.0 4.604337110610127 0.0 28 4.8529283661670334E-5 0.0 0.0 4.736239703602547 0.0 29 4.8529283661670334E-5 0.0 0.0 4.877023155505053 0.0 30 4.8529283661670334E-5 0.0 0.0 5.054785921557751 0.0 31 4.8529283661670334E-5 0.0 0.0 5.211802418845085 0.0 32 4.8529283661670334E-5 0.0 0.0 5.363747605989776 0.0 33 4.8529283661670334E-5 0.0 0.0 5.516930289867838 0.0 34 7.27939254925055E-5 0.0 0.0 5.684744552769894 0.0 35 7.27939254925055E-5 0.0 0.0 5.886626372802442 0.0 36 7.27939254925055E-5 0.0 0.0 6.059948709400098 0.0 37 7.27939254925055E-5 0.0 0.0 6.227762972302154 0.0 38 7.27939254925055E-5 0.0 0.0 6.39875590328405 0.0 39 7.27939254925055E-5 0.0 0.0 6.572005445956212 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 150 0.0 40.5 1 AAATGCG 200 0.0 39.375 1 CATACGA 1440 0.0 39.21875 18 TCGATAG 190 0.0 39.078945 1 TATAACG 75 0.0 39.0 1 CGTTTTT 8315 0.0 38.74925 1 CGTAAGG 815 0.0 38.650303 2 CTATGCG 245 0.0 38.57143 1 GTATCGA 35 6.2522213E-6 38.57143 8 GGCGATA 1995 0.0 38.00752 8 AGGGCGA 5250 0.0 37.585716 6 CTATACG 120 0.0 37.499996 1 ATACTAT 3245 0.0 37.303547 45 GGGCGAT 9875 0.0 37.298733 7 ACATACG 1545 0.0 36.99029 17 ATAGGGC 2245 0.0 36.982185 4 TAGTAGG 2035 0.0 36.707615 2 GTATGCG 185 0.0 36.486485 1 ACGGGTA 395 0.0 36.455696 5 CATATGC 1260 0.0 36.249996 33 >>END_MODULE